RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 FOXO3O43524 673 aa11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 SLIT3O75094 1523 aa11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 NLRP6P59044 892 aa11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 KRT28Q7Z3Y7 464 aa11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
EXOSC1-211ENST00000489158 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
EXOSC1-211ENST00000489158 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
EXOSC1-211ENST00000489158 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
EXOSC1-211ENST00000489158 PXDNQ92626 1479 aa11.67□□□□□ -0.54
EXOSC1-211ENST00000489158 XPCQ01831 940 aaPredicted RBP11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 NGEFQ8N5V2 710 aa11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 SLAIN2Q9P270 581 aa11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 EMILIN1Q9Y6C2 1016 aa11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 NFAT5O94916 1531 aa11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 DIAPH1O60610 1272 aaKnown RBP11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 MED1Q15648 1581 aaPredicted RBP11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 RTL1A6NKG5 1358 aa11.66□□□□□ -0.54
EXOSC1-211ENST00000489158 TNS3Q68CZ2 1445 aa11.65□□□□□ -0.54
EXOSC1-211ENST00000489158 PEAK1Q9H792 1746 aa11.65□□□□□ -0.54
EXOSC1-211ENST00000489158 LTN1O94822 1766 aa11.65□□□□□ -0.54
EXOSC1-211ENST00000489158 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
EXOSC1-211ENST00000489158 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
EXOSC1-211ENST00000489158 FLT4P35916 1363 aa11.65□□□□□ -0.54
EXOSC1-211ENST00000489158 U2AF1L5P0DN76 240 aaPredicted RBP11.65□□□□□ -0.55
EXOSC1-211ENST00000489158 U2AF1Q01081 240 aaKnown RBP eCLIP11.65□□□□□ -0.55
EXOSC1-211ENST00000489158 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.55
EXOSC1-211ENST00000489158 USP19O94966 1318 aa11.65□□□□□ -0.55
EXOSC1-211ENST00000489158 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
EXOSC1-211ENST00000489158 CERKQ8TCT0 537 aa11.64□□□□□ -0.55
EXOSC1-211ENST00000489158 ARHGEF10O15013 1369 aa11.64□□□□□ -0.55
EXOSC1-211ENST00000489158 SLC4A3P48751 1232 aa11.63□□□□□ -0.55
EXOSC1-211ENST00000489158 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
EXOSC1-211ENST00000489158 CRYBG1Q9Y4K1 1723 aa11.63□□□□□ -0.55
EXOSC1-211ENST00000489158 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
EXOSC1-211ENST00000489158 GSE1Q14687 1217 aa11.63□□□□□ -0.55
EXOSC1-211ENST00000489158 BRPF3Q9ULD4 1205 aa11.63□□□□□ -0.55
EXOSC1-211ENST00000489158 RGPD1P0DJD0 1748 aa11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 ABCC6O95255 1503 aa11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 MAP3K19Q56UN5 1328 aa11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 AHDC1Q5TGY3 1603 aaPredicted RBP11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 SPATA31A3Q5VYP0 1347 aa11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 RUNDC1Q96C34 613 aa11.62□□□□□ -0.55
EXOSC1-211ENST00000489158 ROBO1Q9Y6N7 1651 aa11.61□□□□□ -0.55
EXOSC1-211ENST00000489158 APAF1O14727 1248 aa11.61□□□□□ -0.55
EXOSC1-211ENST00000489158 IL13P35225 146 aa11.61□□□□□ -0.55
EXOSC1-211ENST00000489158 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
EXOSC1-211ENST00000489158 FCHSD2O94868 740 aa11.6□□□□□ -0.55
EXOSC1-211ENST00000489158 AMPHP49418 695 aa11.6□□□□□ -0.55
EXOSC1-211ENST00000489158 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
EXOSC1-211ENST00000489158 NEUROD2Q15784 382 aa11.59□□□□□ -0.55
EXOSC1-211ENST00000489158 FRAT1Q92837 279 aaPredicted RBP11.59□□□□□ -0.55
EXOSC1-211ENST00000489158 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
EXOSC1-211ENST00000489158 KDM2BQ8NHM5 1336 aa11.58□□□□□ -0.56
EXOSC1-211ENST00000489158 MAPK8IP3Q9UPT6 1336 aa11.58□□□□□ -0.56
EXOSC1-211ENST00000489158 GCP02774 474 aa11.58□□□□□ -0.56
EXOSC1-211ENST00000489158 ABCA3Q99758 1704 aa11.58□□□□□ -0.56
EXOSC1-211ENST00000489158 HOXC9P31274 260 aa11.57□□□□□ -0.56
EXOSC1-211ENST00000489158 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
EXOSC1-211ENST00000489158 HSP90AB2PQ58FF8 381 aa11.57□□□□□ -0.56
EXOSC1-211ENST00000489158 IP6K1Q92551 441 aa11.57□□□□□ -0.56
EXOSC1-211ENST00000489158 HMOX1P09601 288 aa11.57□□□□□ -0.56
EXOSC1-211ENST00000489158 TCP11L2Q8N4U5 519 aa11.57□□□□□ -0.56
EXOSC1-211ENST00000489158 TOM1O60784 492 aa11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 CCDC27Q2M243 656 aa11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 CENPQQ7L2Z9 268 aaPredicted RBP11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 ARHGEF25Q86VW2 580 aa11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 RRP7AQ9Y3A4 280 aaKnown RBP11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 FAM208AQ9UK61 1670 aaKnown RBP11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 COL22A1Q8NFW1 1626 aaPredicted RBP11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 CPDO75976 1380 aa11.56□□□□□ -0.56
EXOSC1-211ENST00000489158 ZNF521Q96K83 1311 aa11.55□□□□□ -0.56
EXOSC1-211ENST00000489158 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
EXOSC1-211ENST00000489158 KDRP35968 1356 aa11.54□□□□□ -0.56
EXOSC1-211ENST00000489158 PRKAR2BP31323 418 aa11.54□□□□□ -0.56
EXOSC1-211ENST00000489158 C8orf34Q49A92 452 aa11.54□□□□□ -0.56
EXOSC1-211ENST00000489158 COL18A1P39060 1754 aa11.54□□□□□ -0.56
EXOSC1-211ENST00000489158 IGSF1Q8N6C5 1336 aa11.54□□□□□ -0.56
EXOSC1-211ENST00000489158 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
EXOSC1-211ENST00000489158 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
EXOSC1-211ENST00000489158 LTV1Q96GA3 475 aaPredicted RBP11.53□□□□□ -0.56
EXOSC1-211ENST00000489158 PHF23Q9BUL5 403 aaPredicted RBP11.53□□□□□ -0.56
EXOSC1-211ENST00000489158 SULT6B1Q6IMI4 303 aa11.53□□□□□ -0.56
EXOSC1-211ENST00000489158 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
EXOSC1-211ENST00000489158 COL16A1Q07092 1604 aaPredicted RBP11.52□□□□□ -0.56
EXOSC1-211ENST00000489158 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
EXOSC1-211ENST00000489158 FRAT2O75474 233 aaPredicted RBP11.52□□□□□ -0.57
EXOSC1-211ENST00000489158 DUSP27Q5VZP5 1158 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms