RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 LMOD2Q6P5Q4 547 aa23.52■■□□□ 1.36
POLR2J3-205ENST00000489144 HSP90AB2PQ58FF8 381 aa23.52■■□□□ 1.36
POLR2J3-205ENST00000489144 DUSP27Q5VZP5 1158 aa23.52■■□□□ 1.36
POLR2J3-205ENST00000489144 B4GALNT3Q6L9W6 998 aa23.52■■□□□ 1.36
POLR2J3-205ENST00000489144 PSME1Q06323 249 aa23.51■■□□□ 1.35
POLR2J3-205ENST00000489144 ZBTB7CA1YPR0 619 aa23.51■■□□□ 1.35
POLR2J3-205ENST00000489144 RRP9O43818 475 aaKnown RBP23.5■■□□□ 1.35
POLR2J3-205ENST00000489144 PLEKHF1Q96S99 279 aa23.5■■□□□ 1.35
POLR2J3-205ENST00000489144 PIK3C2AO00443 1686 aa23.5■■□□□ 1.35
POLR2J3-205ENST00000489144 PRKAR2BP31323 418 aa23.5■■□□□ 1.35
POLR2J3-205ENST00000489144 HSP90AA2PQ14568 343 aaPredicted RBP23.49■■□□□ 1.35
POLR2J3-205ENST00000489144 IQSEC2Q5JU85 1478 aa23.49■■□□□ 1.35
POLR2J3-205ENST00000489144 NWD1Q149M9 1564 aa23.49■■□□□ 1.35
POLR2J3-205ENST00000489144 IL13P35225 146 aa23.49■■□□□ 1.35
POLR2J3-205ENST00000489144 SLFN5Q08AF3 891 aa23.48■■□□□ 1.35
POLR2J3-205ENST00000489144 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
POLR2J3-205ENST00000489144 ZNF335Q9H4Z2 1342 aaPredicted RBP23.48■■□□□ 1.35
POLR2J3-205ENST00000489144 MAPK8IP3Q9UPT6 1336 aa23.48■■□□□ 1.35
POLR2J3-205ENST00000489144 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
POLR2J3-205ENST00000489144 PHACTR3Q96KR7 559 aa23.47■■□□□ 1.35
POLR2J3-205ENST00000489144 AATKQ6ZMQ8 1374 aa23.47■■□□□ 1.35
POLR2J3-205ENST00000489144 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
POLR2J3-205ENST00000489144 STRCQ7RTU9 1775 aa23.46■■□□□ 1.35
POLR2J3-205ENST00000489144 EIF4A2Q14240 407 aaKnown RBP23.46■■□□□ 1.35
POLR2J3-205ENST00000489144 C19orf44Q9H6X5 657 aa23.46■■□□□ 1.35
POLR2J3-205ENST00000489144 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
POLR2J3-205ENST00000489144 PEAK1Q9H792 1746 aa23.45■■□□□ 1.34
POLR2J3-205ENST00000489144 LRRC7Q96NW7 1537 aa23.45■■□□□ 1.34
POLR2J3-205ENST00000489144 CDK12Q9NYV4 1490 aaPredicted RBP23.44■■□□□ 1.34
POLR2J3-205ENST00000489144 TMPOP42166 694 aaKnown RBP23.44■■□□□ 1.34
POLR2J3-205ENST00000489144 PDIA4P13667 645 aaKnown RBP23.44■■□□□ 1.34
POLR2J3-205ENST00000489144 ATF3P18847 181 aa23.44■■□□□ 1.34
POLR2J3-205ENST00000489144 LTV1Q96GA3 475 aaPredicted RBP23.44■■□□□ 1.34
POLR2J3-205ENST00000489144 RRP1P56182 461 aaKnown RBP23.43■■□□□ 1.34
POLR2J3-205ENST00000489144 AMPHP49418 695 aa23.43■■□□□ 1.34
POLR2J3-205ENST00000489144 RIPK4P57078 832 aa23.42■■□□□ 1.34
POLR2J3-205ENST00000489144 THUMPD2Q9BTF0 503 aaKnown RBP23.42■■□□□ 1.34
POLR2J3-205ENST00000489144 USP31Q70CQ4 1352 aa23.41■■□□□ 1.34
POLR2J3-205ENST00000489144 SULT6B1Q6IMI4 303 aa23.4■■□□□ 1.34
POLR2J3-205ENST00000489144 TSR2Q969E8 191 aaKnown RBP23.4■■□□□ 1.34
POLR2J3-205ENST00000489144 TRIM35Q9UPQ4 493 aa23.4■■□□□ 1.34
POLR2J3-205ENST00000489144 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.34
POLR2J3-205ENST00000489144 RNF123Q5XPI4 1314 aa23.39■■□□□ 1.34
POLR2J3-205ENST00000489144 E9PSI1 815 aa23.39■■□□□ 1.33
POLR2J3-205ENST00000489144 FCHSD2O94868 740 aa23.38■■□□□ 1.33
POLR2J3-205ENST00000489144 MARF1Q9Y4F3 1742 aaKnown RBP23.37■■□□□ 1.33
POLR2J3-205ENST00000489144 C20orf194Q5TEA3 1177 aa23.37■■□□□ 1.33
POLR2J3-205ENST00000489144 TRMT2AQ8IZ69 625 aaKnown RBP23.37■■□□□ 1.33
POLR2J3-205ENST00000489144 KRT28Q7Z3Y7 464 aa23.37■■□□□ 1.33
POLR2J3-205ENST00000489144 BCAR3O75815 825 aa23.36■■□□□ 1.33
POLR2J3-205ENST00000489144 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
POLR2J3-205ENST00000489144 EXOC6Q8TAG9 804 aa23.35■■□□□ 1.33
POLR2J3-205ENST00000489144 FRAT1Q92837 279 aaPredicted RBP23.35■■□□□ 1.33
POLR2J3-205ENST00000489144 BCL2L13Q9BXK5 485 aa23.35■■□□□ 1.33
POLR2J3-205ENST00000489144 FAM83GA6ND36 823 aa23.34■■□□□ 1.33
POLR2J3-205ENST00000489144 DCTN1Q14203 1278 aa23.34■■□□□ 1.33
POLR2J3-205ENST00000489144 MST1RQ04912 1400 aa23.34■■□□□ 1.33
POLR2J3-205ENST00000489144 USHBP1Q8N6Y0 703 aa23.34■■□□□ 1.33
POLR2J3-205ENST00000489144 HOXC9P31274 260 aa23.32■■□□□ 1.32
POLR2J3-205ENST00000489144 FLT4P35916 1363 aa23.31■■□□□ 1.32
POLR2J3-205ENST00000489144 HSP90AA1P07900 732 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-205ENST00000489144 SBNO1A3KN83 1393 aa23.31■■□□□ 1.32
POLR2J3-205ENST00000489144 MSH6P52701 1360 aa23.31■■□□□ 1.32
POLR2J3-205ENST00000489144 CABLES1Q8TDN4 633 aa23.3■■□□□ 1.32
POLR2J3-205ENST00000489144 XIRP1Q702N8 1843 aaKnown RBP23.29■■□□□ 1.32
POLR2J3-205ENST00000489144 CCDC27Q2M243 656 aa23.29■■□□□ 1.32
POLR2J3-205ENST00000489144 WDR63Q8IWG1 891 aa23.29■■□□□ 1.32
POLR2J3-205ENST00000489144 EYA1Q99502 592 aa23.29■■□□□ 1.32
POLR2J3-205ENST00000489144 NFE2L2Q16236 605 aa23.29■■□□□ 1.32
POLR2J3-205ENST00000489144 CADPS2Q86UW7 1296 aa23.28■■□□□ 1.32
POLR2J3-205ENST00000489144 BCL11BQ9C0K0 894 aaPredicted RBP23.28■■□□□ 1.32
POLR2J3-205ENST00000489144 NGEFQ8N5V2 710 aa23.27■■□□□ 1.32
POLR2J3-205ENST00000489144 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
POLR2J3-205ENST00000489144 ZC3H6P61129 1189 aaKnown RBP23.27■■□□□ 1.32
POLR2J3-205ENST00000489144 CRBNQ96SW2 442 aa23.27■■□□□ 1.32
POLR2J3-205ENST00000489144 GCP02774 474 aa23.26■■□□□ 1.31
POLR2J3-205ENST00000489144 EXOSC9Q06265 439 aaKnown RBP23.25■■□□□ 1.31
POLR2J3-205ENST00000489144 LTN1O94822 1766 aa23.24■■□□□ 1.31
POLR2J3-205ENST00000489144 LRRC59Q96AG4 307 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-205ENST00000489144 MCM10Q7L590 875 aa23.23■■□□□ 1.31
POLR2J3-205ENST00000489144 BRINP3Q76B58 766 aa23.22■■□□□ 1.31
POLR2J3-205ENST00000489144 TNNQ9UQP3 1299 aa23.22■■□□□ 1.31
POLR2J3-205ENST00000489144 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
POLR2J3-205ENST00000489144 NFAT5O94916 1531 aa23.22■■□□□ 1.31
POLR2J3-205ENST00000489144 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
POLR2J3-205ENST00000489144 TRPM3Q9HCF6 1732 aaPredicted RBP23.21■■□□□ 1.31
POLR2J3-205ENST00000489144 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
POLR2J3-205ENST00000489144 AXIN2Q9Y2T1 843 aa23.19■■□□□ 1.3
POLR2J3-205ENST00000489144 RGPD1P0DJD0 1748 aa23.19■■□□□ 1.3
POLR2J3-205ENST00000489144 MTHFSDQ2M296 383 aaKnown RBP23.19■■□□□ 1.3
POLR2J3-205ENST00000489144 RRAGDQ9NQL2 400 aaPredicted RBP23.19■■□□□ 1.3
POLR2J3-205ENST00000489144 SLAIN2Q9P270 581 aa23.19■■□□□ 1.3
POLR2J3-205ENST00000489144 NFKBIBQ15653 356 aa23.18■■□□□ 1.3
POLR2J3-205ENST00000489144 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
POLR2J3-205ENST00000489144 RARSP54136 660 aaKnown RBP23.18■■□□□ 1.3
POLR2J3-205ENST00000489144 DCCP43146 1447 aa23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 IP6K1Q92551 441 aa23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms