RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 GOLGB1Q14789 3259 aaKnown RBP9.63□□□□□ -0.87
BEST3-205ENST00000488961 SULT6B1Q6IMI4 303 aa9.63□□□□□ -0.87
BEST3-205ENST00000488961 PRR36Q9H6K5 1346 aa9.63□□□□□ -0.87
BEST3-205ENST00000488961 XPCQ01831 940 aaPredicted RBP9.62□□□□□ -0.87
BEST3-205ENST00000488961 MVPQ14764 893 aaKnown RBP9.62□□□□□ -0.87
BEST3-205ENST00000488961 HOMEZQ8IX15 550 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 C8orf58Q8NAV2 365 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 TMEM131LA2VDJ0 1609 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 ALKQ9UM73 1620 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 WASLO00401 505 aaPredicted RBP9.62□□□□□ -0.87
BEST3-205ENST00000488961 USHBP1Q8N6Y0 703 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 PPIP5K1Q6PFW1 1433 aa9.62□□□□□ -0.87
BEST3-205ENST00000488961 WDR63Q8IWG1 891 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 PANK2Q9BZ23 570 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 NEO1Q92859 1461 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 ARID3AQ99856 593 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 SETBP1Q9Y6X0 1596 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 USP19O94966 1318 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 HAP1P54257 671 aaPredicted RBP9.61□□□□□ -0.87
BEST3-205ENST00000488961 COG3Q96JB2 828 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
BEST3-205ENST00000488961 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
BEST3-205ENST00000488961 ZMYM3Q14202 1370 aa9.6□□□□□ -0.87
BEST3-205ENST00000488961 IQSEC2Q5JU85 1478 aa9.6□□□□□ -0.87
BEST3-205ENST00000488961 ATF7IPQ6VMQ6 1270 aa9.6□□□□□ -0.87
BEST3-205ENST00000488961 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
BEST3-205ENST00000488961 LMOD2Q6P5Q4 547 aa9.59□□□□□ -0.87
BEST3-205ENST00000488961 PRDM10Q9NQV6 1147 aa9.59□□□□□ -0.87
BEST3-205ENST00000488961 CFAP74Q9C0B2 1584 aa9.59□□□□□ -0.87
BEST3-205ENST00000488961 ANKRD45Q5TZF3 282 aa9.59□□□□□ -0.87
BEST3-205ENST00000488961 GZF1Q9H116 711 aaPredicted RBP9.59□□□□□ -0.87
BEST3-205ENST00000488961 ACEP12821 1306 aa9.58□□□□□ -0.88
BEST3-205ENST00000488961 CPS1P31327 1500 aa9.58□□□□□ -0.88
BEST3-205ENST00000488961 A2ML1A8K2U0 1454 aa9.58□□□□□ -0.88
BEST3-205ENST00000488961 XRCC6P12956 609 aaKnown RBP eCLIP9.58□□□□□ -0.88
BEST3-205ENST00000488961 SLC4A10Q6U841 1118 aa9.58□□□□□ -0.88
BEST3-205ENST00000488961 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
BEST3-205ENST00000488961 F6X3S4 739 aa9.58□□□□□ -0.88
BEST3-205ENST00000488961 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
BEST3-205ENST00000488961 TSHZ3Q63HK5 1081 aa9.57□□□□□ -0.88
BEST3-205ENST00000488961 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
BEST3-205ENST00000488961 RWDD1Q9H446 243 aaPredicted RBP9.57□□□□□ -0.88
BEST3-205ENST00000488961 LRRC7Q96NW7 1537 aa9.57□□□□□ -0.88
BEST3-205ENST00000488961 SMARCA5O60264 1052 aaPredicted RBP9.57□□□□□ -0.88
BEST3-205ENST00000488961 NGDNQ8NEJ9 315 aaKnown RBP9.57□□□□□ -0.88
BEST3-205ENST00000488961 ERBB4Q15303 1308 aa9.57□□□□□ -0.88
BEST3-205ENST00000488961 IL13P35225 146 aa9.57□□□□□ -0.88
BEST3-205ENST00000488961 TWISTNBQ3B726 338 aaPredicted RBP9.57□□□□□ -0.88
BEST3-205ENST00000488961 CCDC61Q9Y6R9 512 aa9.57□□□□□ -0.88
BEST3-205ENST00000488961 TPM2P07951 284 aa9.56□□□□□ -0.88
BEST3-205ENST00000488961 EIF4A2Q14240 407 aaKnown RBP9.56□□□□□ -0.88
BEST3-205ENST00000488961 OTUD7AQ8TE49 926 aaPredicted RBP9.56□□□□□ -0.88
BEST3-205ENST00000488961 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
BEST3-205ENST00000488961 DIP2BQ9P265 1576 aa9.56□□□□□ -0.88
BEST3-205ENST00000488961 ARHGEF40Q8TER5 1519 aa9.56□□□□□ -0.88
BEST3-205ENST00000488961 NFE2L2Q16236 605 aa9.56□□□□□ -0.88
BEST3-205ENST00000488961 IPO4Q8TEX9 1081 aaKnown RBP9.56□□□□□ -0.88
BEST3-205ENST00000488961 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
BEST3-205ENST00000488961 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
BEST3-205ENST00000488961 VGLL3A8MV65 326 aa9.55□□□□□ -0.88
BEST3-205ENST00000488961 DTNBO60941 627 aa9.55□□□□□ -0.88
BEST3-205ENST00000488961 VAMP4O75379 141 aa9.55□□□□□ -0.88
BEST3-205ENST00000488961 COL3A1P02461 1466 aaPredicted RBP9.55□□□□□ -0.88
BEST3-205ENST00000488961 FCHSD2O94868 740 aa9.54□□□□□ -0.88
BEST3-205ENST00000488961 G2E3Q7L622 706 aa9.54□□□□□ -0.88
BEST3-205ENST00000488961 RIMS1Q86UR5 1692 aaKnown RBP9.53□□□□□ -0.88
BEST3-205ENST00000488961 ESPNB1AK53 854 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 NLRP6P59044 892 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 CCDC27Q2M243 656 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 KIAA1211Q6ZU35 1233 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 SIRT2Q8IXJ6 389 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 TBC1D2Q9BYX2 928 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 ARHGAP31Q2M1Z3 1444 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 ANXA1P04083 346 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 AMPHP49418 695 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 ZBTB40Q9NUA8 1239 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
BEST3-205ENST00000488961 AK9Q5TCS8 1911 aa9.52□□□□□ -0.88
BEST3-205ENST00000488961 GOLGA6L3A6NEY3 463 aa9.52□□□□□ -0.89
BEST3-205ENST00000488961 MRPL50Q8N5N7 158 aaKnown RBP9.52□□□□□ -0.89
BEST3-205ENST00000488961 FAM13BQ9NYF5 915 aa9.52□□□□□ -0.89
BEST3-205ENST00000488961 TTC21BQ7Z4L5 1316 aa9.52□□□□□ -0.89
BEST3-205ENST00000488961 TNRQ92752 1358 aa9.52□□□□□ -0.89
BEST3-205ENST00000488961 ZNF830Q96NB3 372 aaPredicted RBP9.52□□□□□ -0.89
BEST3-205ENST00000488961 KIF13AQ9H1H9 1805 aa9.51□□□□□ -0.89
BEST3-205ENST00000488961 KCNA6P17658 529 aa9.51□□□□□ -0.89
BEST3-205ENST00000488961 DLG5Q8TDM6 1919 aa9.51□□□□□ -0.89
BEST3-205ENST00000488961 SMAP1Q8IYB5 467 aaPredicted RBP9.51□□□□□ -0.89
BEST3-205ENST00000488961 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
BEST3-205ENST00000488961 RGPD8O14715 1765 aaPredicted RBP9.51□□□□□ -0.89
BEST3-205ENST00000488961 KIF20BQ96Q89 1820 aa9.51□□□□□ -0.89
BEST3-205ENST00000488961 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
BEST3-205ENST00000488961 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
BEST3-205ENST00000488961 MTHFSDQ2M296 383 aaKnown RBP9.5□□□□□ -0.89
BEST3-205ENST00000488961 DDX17Q92841 729 aaKnown RBP9.5□□□□□ -0.89
BEST3-205ENST00000488961 UPF2Q9HAU5 1272 aaKnown RBP9.5□□□□□ -0.89
BEST3-205ENST00000488961 MAP3K19Q56UN5 1328 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms