RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 HECW2Q9P2P5 1572 aa8.02□□□□□ -1.13
SF3A3-207ENST00000488934 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
SF3A3-207ENST00000488934 ZBTB24O43167 697 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-207ENST00000488934 HLA-CQ95604 372 aa8.02□□□□□ -1.13
SF3A3-207ENST00000488934 RSPH6AQ9H0K4 717 aa8.02□□□□□ -1.13
SF3A3-207ENST00000488934 FCF1Q9Y324 198 aaKnown RBP8.02□□□□□ -1.13
SF3A3-207ENST00000488934 MOXD2PA6NHM9 499 aa8.01□□□□□ -1.13
SF3A3-207ENST00000488934 RAPGEF3O95398 923 aa8.01□□□□□ -1.13
SF3A3-207ENST00000488934 RPIAP49247 311 aa8.01□□□□□ -1.13
SF3A3-207ENST00000488934 MMP16P51512 607 aa8.01□□□□□ -1.13
SF3A3-207ENST00000488934 GUCA2AQ02747 115 aa8.01□□□□□ -1.13
SF3A3-207ENST00000488934 GPATCH8Q9UKJ3 1502 aaKnown RBP8.01□□□□□ -1.13
SF3A3-207ENST00000488934 PRDM9Q9NQV7 894 aa8□□□□□ -1.13
SF3A3-207ENST00000488934 SAMD9LQ8IVG5 1584 aa8□□□□□ -1.13
SF3A3-207ENST00000488934 LRRC9Q6ZRR7 1453 aa8□□□□□ -1.13
SF3A3-207ENST00000488934 DXOO77932 396 aaKnown RBP7.99□□□□□ -1.13
SF3A3-207ENST00000488934 CD2BP2O95400 341 aaKnown RBP7.99□□□□□ -1.13
SF3A3-207ENST00000488934 JUNDP17535 347 aa7.99□□□□□ -1.13
SF3A3-207ENST00000488934 NDUFV2P19404 249 aa7.99□□□□□ -1.13
SF3A3-207ENST00000488934 MTMR2Q13614 643 aa7.99□□□□□ -1.13
SF3A3-207ENST00000488934 BCORL1Q5H9F3 1711 aa7.99□□□□□ -1.13
SF3A3-207ENST00000488934 SPRYD7Q5W111 196 aa7.99□□□□□ -1.13
SF3A3-207ENST00000488934 RSBN1LQ6PCB5 846 aaPredicted RBP7.99□□□□□ -1.13
SF3A3-207ENST00000488934 ZNF598Q86UK7 904 aaKnown RBP7.99□□□□□ -1.13
SF3A3-207ENST00000488934 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
SF3A3-207ENST00000488934 CFDP1Q9UEE9 299 aaPredicted RBP7.99□□□□□ -1.13
SF3A3-207ENST00000488934 MLH3Q9UHC1 1453 aa7.99□□□□□ -1.13
SF3A3-207ENST00000488934 SYCP2Q9BX26 1530 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 REREQ9P2R6 1566 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 C9orf84Q5VXU9 1444 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 KIAA1107Q9UPP5 1409 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 SPTLC1O15269 473 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 RIC3Q7Z5B4 369 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 NCOA2Q15596 1464 aa7.98□□□□□ -1.13
SF3A3-207ENST00000488934 GFRA3O60609 400 aa7.97□□□□□ -1.13
SF3A3-207ENST00000488934 ZNF697Q5TEC3 545 aa7.97□□□□□ -1.13
SF3A3-207ENST00000488934 PRPF38BQ5VTL8 546 aaKnown RBP7.97□□□□□ -1.13
SF3A3-207ENST00000488934 LIAT1Q6ZQX7 453 aa7.97□□□□□ -1.13
SF3A3-207ENST00000488934 KDM4CQ9H3R0 1056 aa7.97□□□□□ -1.13
SF3A3-207ENST00000488934 ZBTB3Q9H5J0 574 aa7.97□□□□□ -1.13
SF3A3-207ENST00000488934 PDZRN3Q9UPQ7 1066 aa7.97□□□□□ -1.13
SF3A3-207ENST00000488934 ATP10AO60312 1499 aa7.97□□□□□ -1.13
SF3A3-207ENST00000488934 ARID4BQ4LE39 1312 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-207ENST00000488934 YEATS2Q9ULM3 1422 aa7.96□□□□□ -1.13
SF3A3-207ENST00000488934 ADAMTSL3P82987 1691 aa7.96□□□□□ -1.13
SF3A3-207ENST00000488934 NRG2O14511 850 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-207ENST00000488934 CCDC24Q8N4L8 307 aa7.96□□□□□ -1.14
SF3A3-207ENST00000488934 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.14
SF3A3-207ENST00000488934 ZNF777Q9ULD5 760 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-207ENST00000488934 DIP2CQ9Y2E4 1556 aa7.96□□□□□ -1.14
SF3A3-207ENST00000488934 ABCA6Q8N139 1617 aa7.96□□□□□ -1.14
SF3A3-207ENST00000488934 FER1L4A9Z1Z3 1794 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 KIDINS220Q9ULH0 1771 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 ATP7AQ04656 1500 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 TUSC1Q2TAM9 212 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 PLA2G2CQ5R387 149 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 MYSM1Q5VVJ2 828 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 DESI1Q6ICB0 168 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 PRR7Q8TB68 274 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 INO80Q9ULG1 1556 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-207ENST00000488934 ADGBQ8N7X0 1667 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 TRAPPC8Q9Y2L5 1435 aa7.95□□□□□ -1.14
SF3A3-207ENST00000488934 CAMSAP2Q08AD1 1489 aa7.94□□□□□ -1.14
SF3A3-207ENST00000488934 ARHGEF12Q9NZN5 1544 aa7.94□□□□□ -1.14
SF3A3-207ENST00000488934 MADDQ8WXG6 1647 aa7.94□□□□□ -1.14
SF3A3-207ENST00000488934 AFAP1Q8N556 730 aa7.94□□□□□ -1.14
SF3A3-207ENST00000488934 NUDT12Q9BQG2 462 aa7.94□□□□□ -1.14
SF3A3-207ENST00000488934 MYOM3Q5VTT5 1437 aa7.94□□□□□ -1.14
SF3A3-207ENST00000488934 MIA2Q96PC5 1412 aa7.94□□□□□ -1.14
SF3A3-207ENST00000488934 AGLP35573 1532 aa7.93□□□□□ -1.14
SF3A3-207ENST00000488934 ARHGEF5Q12774 1597 aa7.93□□□□□ -1.14
SF3A3-207ENST00000488934 RIMS1Q86UR5 1692 aaKnown RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 PTPRNQ16849 979 aa7.93□□□□□ -1.14
SF3A3-207ENST00000488934 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
SF3A3-207ENST00000488934 NUTM2DQ5VT03 806 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 Q6ZNB5 142 aa7.93□□□□□ -1.14
SF3A3-207ENST00000488934 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 EMID1Q96A84 441 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 GPBP1L1Q9HC44 474 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
SF3A3-207ENST00000488934 CCDC141Q6ZP82 1450 aa7.93□□□□□ -1.14
SF3A3-207ENST00000488934 CCNYL3P0C7X3 344 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 PRR20EP86478 221 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 PRR20CP86479 221 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 PRR20DP86480 221 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 PRR20BP86481 221 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 PRR20AP86496 221 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 CSPP1Q1MSJ5 1256 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 RTEL1-TNFRSF6BF6WH68 1400 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 SIGLEC1Q9BZZ2 1709 aa7.92□□□□□ -1.14
SF3A3-207ENST00000488934 HRCP23327 699 aa7.91□□□□□ -1.14
SF3A3-207ENST00000488934 HNRNPMP52272 730 aaKnown RBP eCLIP7.91□□□□□ -1.14
SF3A3-207ENST00000488934 TRIM32Q13049 653 aa7.91□□□□□ -1.14
SF3A3-207ENST00000488934 NEUROD2Q15784 382 aa7.91□□□□□ -1.14
SF3A3-207ENST00000488934 PTPRMP28827 1452 aa7.91□□□□□ -1.14
SF3A3-207ENST00000488934 MBD5Q9P267 1494 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms