RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 ANKRD36BQ8N2N9 1353 aa8.78□□□□□ -1
HDLBP-243ENST00000488923 PTCD2Q8WV60 388 aaKnown RBP8.78□□□□□ -1
HDLBP-243ENST00000488923 TSPOAP1O95153 1857 aa8.77□□□□□ -1.01
HDLBP-243ENST00000488923 USP32Q8NFA0 1604 aa8.77□□□□□ -1.01
HDLBP-243ENST00000488923 DLC1Q96QB1 1528 aa8.77□□□□□ -1.01
HDLBP-243ENST00000488923 TBC1D12O60347 775 aa8.77□□□□□ -1.01
HDLBP-243ENST00000488923 PTPN5P54829 565 aa8.77□□□□□ -1.01
HDLBP-243ENST00000488923 ERICH6Q7L0X2 663 aa8.77□□□□□ -1.01
HDLBP-243ENST00000488923 A2ML1A8K2U0 1454 aa8.77□□□□□ -1.01
HDLBP-243ENST00000488923 POLR3AO14802 1390 aaPredicted RBP8.76□□□□□ -1.01
HDLBP-243ENST00000488923 ZMYM3Q14202 1370 aa8.76□□□□□ -1.01
HDLBP-243ENST00000488923 KIF13AQ9H1H9 1805 aa8.76□□□□□ -1.01
HDLBP-243ENST00000488923 FBXO31Q5XUX0 539 aaPredicted RBP8.76□□□□□ -1.01
HDLBP-243ENST00000488923 TMEM132EQ6IEE7 984 aa8.76□□□□□ -1.01
HDLBP-243ENST00000488923 YTHDC2Q9H6S0 1430 aaKnown RBP8.76□□□□□ -1.01
HDLBP-243ENST00000488923 CLTCQ00610 1675 aaKnown RBP8.75□□□□□ -1.01
HDLBP-243ENST00000488923 ARHGEF28Q8N1W1 1705 aaKnown RBP8.75□□□□□ -1.01
HDLBP-243ENST00000488923 NSD3Q9BZ95 1437 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 RIMS2Q9UQ26 1411 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 MORC1Q86VD1 984 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 SIRT1Q96EB6 747 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 BCANQ96GW7 911 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 TERF2IPQ9NYB0 399 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 POGKQ9P215 609 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 ALKQ9UM73 1620 aa8.75□□□□□ -1.01
HDLBP-243ENST00000488923 ABCC11Q96J66 1382 aa8.74□□□□□ -1.01
HDLBP-243ENST00000488923 A0A0G2JS52 829 aa8.74□□□□□ -1.01
HDLBP-243ENST00000488923 PRKCSHP14314 528 aaPredicted RBP8.74□□□□□ -1.01
HDLBP-243ENST00000488923 CARD14Q9BXL6 1004 aa8.74□□□□□ -1.01
HDLBP-243ENST00000488923 PTPRMP28827 1452 aa8.74□□□□□ -1.01
HDLBP-243ENST00000488923 TULP4Q9NRJ4 1543 aa8.74□□□□□ -1.01
HDLBP-243ENST00000488923 TNRQ92752 1358 aa8.73□□□□□ -1.01
HDLBP-243ENST00000488923 MED14O60244 1454 aa8.73□□□□□ -1.01
HDLBP-243ENST00000488923 NLRP1Q9C000 1473 aa8.73□□□□□ -1.01
HDLBP-243ENST00000488923 HDGFL2Q7Z4V5 671 aaPredicted RBP8.73□□□□□ -1.01
HDLBP-243ENST00000488923 RCAN3Q9UKA8 241 aa8.73□□□□□ -1.01
HDLBP-243ENST00000488923 ADAMTS8Q9UP79 889 aa8.73□□□□□ -1.01
HDLBP-243ENST00000488923 SRPK2P78362 688 aaKnown RBP8.72□□□□□ -1.01
HDLBP-243ENST00000488923 MLECQ14165 292 aa8.72□□□□□ -1.01
HDLBP-243ENST00000488923 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
HDLBP-243ENST00000488923 SLC12A5Q9H2X9 1139 aa8.72□□□□□ -1.01
HDLBP-243ENST00000488923 VPS9D1Q9Y2B5 631 aa8.72□□□□□ -1.01
HDLBP-243ENST00000488923 CFAP65Q6ZU64 1925 aaKnown RBP8.72□□□□□ -1.01
HDLBP-243ENST00000488923 FAM135BQ49AJ0 1406 aa8.71□□□□□ -1.01
HDLBP-243ENST00000488923 RGL2O15211 777 aa8.71□□□□□ -1.02
HDLBP-243ENST00000488923 ECM2O94769 699 aaPredicted RBP8.71□□□□□ -1.02
HDLBP-243ENST00000488923 FOXK1P85037 733 aa8.71□□□□□ -1.02
HDLBP-243ENST00000488923 NUTM2DQ5VT03 806 aaPredicted RBP8.71□□□□□ -1.02
HDLBP-243ENST00000488923 PLPP6Q8IY26 295 aa8.71□□□□□ -1.02
HDLBP-243ENST00000488923 PRAM1Q96QH2 718 aa8.71□□□□□ -1.02
HDLBP-243ENST00000488923 SLC4A5Q9BY07 1137 aa8.71□□□□□ -1.02
HDLBP-243ENST00000488923 GOLGA8CPA6NN73 597 aa8.7□□□□□ -1.02
HDLBP-243ENST00000488923 RRP1P56182 461 aaKnown RBP8.7□□□□□ -1.02
HDLBP-243ENST00000488923 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.7□□□□□ -1.02
HDLBP-243ENST00000488923 STK26Q9P289 416 aa8.7□□□□□ -1.02
HDLBP-243ENST00000488923 TECPR2O15040 1411 aa8.7□□□□□ -1.02
HDLBP-243ENST00000488923 ATP7BP35670 1465 aa8.7□□□□□ -1.02
HDLBP-243ENST00000488923 PNNQ9H307 717 aaKnown RBP8.69□□□□□ -1.02
HDLBP-243ENST00000488923 ZNF521Q96K83 1311 aa8.69□□□□□ -1.02
HDLBP-243ENST00000488923 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
HDLBP-243ENST00000488923 E9PSI1 815 aa8.68□□□□□ -1.02
HDLBP-243ENST00000488923 IRX6P78412 446 aaPredicted RBP8.68□□□□□ -1.02
HDLBP-243ENST00000488923 DSG2Q14126 1118 aa8.68□□□□□ -1.02
HDLBP-243ENST00000488923 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
HDLBP-243ENST00000488923 CCDC136Q96JN2 1154 aa8.68□□□□□ -1.02
HDLBP-243ENST00000488923 TSHZ2Q9NRE2 1034 aa8.68□□□□□ -1.02
HDLBP-243ENST00000488923 EID1Q9Y6B2 187 aa8.68□□□□□ -1.02
HDLBP-243ENST00000488923 A0A1W2PP64 1363 aa8.67□□□□□ -1.02
HDLBP-243ENST00000488923 MINK1Q8N4C8 1332 aaPredicted RBP8.67□□□□□ -1.02
HDLBP-243ENST00000488923 RUNDC1Q96C34 613 aa8.67□□□□□ -1.02
HDLBP-243ENST00000488923 CDK19Q9BWU1 502 aa8.67□□□□□ -1.02
HDLBP-243ENST00000488923 PLEKHG1Q9ULL1 1385 aa8.67□□□□□ -1.02
HDLBP-243ENST00000488923 MYO5BQ9ULV0 1848 aa8.67□□□□□ -1.02
HDLBP-243ENST00000488923 KNDC1Q76NI1 1749 aa8.66□□□□□ -1.02
HDLBP-243ENST00000488923 CCDC27Q2M243 656 aa8.66□□□□□ -1.02
HDLBP-243ENST00000488923 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
HDLBP-243ENST00000488923 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
HDLBP-243ENST00000488923 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
HDLBP-243ENST00000488923 CPS1P31327 1500 aa8.65□□□□□ -1.02
HDLBP-243ENST00000488923 PLEKHH1Q9ULM0 1364 aa8.65□□□□□ -1.02
HDLBP-243ENST00000488923 WASLO00401 505 aaPredicted RBP8.65□□□□□ -1.02
HDLBP-243ENST00000488923 MTHFSP49914 203 aa8.65□□□□□ -1.02
HDLBP-243ENST00000488923 SLFN5Q08AF3 891 aa8.65□□□□□ -1.02
HDLBP-243ENST00000488923 SAFB2Q14151 953 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDLBP-243ENST00000488923 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.02
HDLBP-243ENST00000488923 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
HDLBP-243ENST00000488923 SETD1AO15047 1707 aaKnown RBP8.65□□□□□ -1.03
HDLBP-243ENST00000488923 NKTRP30414 1462 aaKnown RBP8.64□□□□□ -1.03
HDLBP-243ENST00000488923 EDC4Q6P2E9 1401 aaKnown RBP8.64□□□□□ -1.03
HDLBP-243ENST00000488923 APAF1O14727 1248 aa8.64□□□□□ -1.03
HDLBP-243ENST00000488923 TRMT2AQ8IZ69 625 aaKnown RBP8.64□□□□□ -1.03
HDLBP-243ENST00000488923 THEMISQ8N1K5 641 aaPredicted RBP8.64□□□□□ -1.03
HDLBP-243ENST00000488923 WNT2BQ93097 391 aa8.64□□□□□ -1.03
HDLBP-243ENST00000488923 CDCA7LQ96GN5 454 aa8.64□□□□□ -1.03
HDLBP-243ENST00000488923 SLIT1O75093 1534 aa8.64□□□□□ -1.03
HDLBP-243ENST00000488923 UBR1Q8IWV7 1749 aa8.63□□□□□ -1.03
HDLBP-243ENST00000488923 NRXN3Q9Y4C0 1643 aa8.63□□□□□ -1.03
HDLBP-243ENST00000488923 BHMG1C9JSJ3 638 aaPredicted RBP8.63□□□□□ -1.03
HDLBP-243ENST00000488923 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms