RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ATF3P18847 181 aa26.42■■□□□ 1.82
NECAB3-213ENST00000488489 SBNO1A3KN83 1393 aa26.42■■□□□ 1.82
NECAB3-213ENST00000488489 RIPK4P57078 832 aa26.42■■□□□ 1.82
NECAB3-213ENST00000488489 MST1RQ04912 1400 aa26.42■■□□□ 1.82
NECAB3-213ENST00000488489 PPP4R2Q9NY27 417 aa26.41■■□□□ 1.82
NECAB3-213ENST00000488489 FLT4P35916 1363 aa26.41■■□□□ 1.82
NECAB3-213ENST00000488489 DCCP43146 1447 aa26.4■■□□□ 1.82
NECAB3-213ENST00000488489 PLIN1O60240 522 aa26.39■■□□□ 1.82
NECAB3-213ENST00000488489 AEBP1Q8IUX7 1158 aa26.39■■□□□ 1.81
NECAB3-213ENST00000488489 XIRP1Q702N8 1843 aaKnown RBP26.38■■□□□ 1.81
NECAB3-213ENST00000488489 AMPHP49418 695 aa26.38■■□□□ 1.81
NECAB3-213ENST00000488489 ZNF335Q9H4Z2 1342 aaPredicted RBP26.37■■□□□ 1.81
NECAB3-213ENST00000488489 RGPD1P0DJD0 1748 aa26.36■■□□□ 1.81
NECAB3-213ENST00000488489 SULT6B1Q6IMI4 303 aa26.36■■□□□ 1.81
NECAB3-213ENST00000488489 NEFMP07197 916 aa26.36■■□□□ 1.81
NECAB3-213ENST00000488489 KIF1AQ12756 1690 aa26.36■■□□□ 1.81
NECAB3-213ENST00000488489 NFE2L2Q16236 605 aa26.35■■□□□ 1.81
NECAB3-213ENST00000488489 KRT28Q7Z3Y7 464 aa26.35■■□□□ 1.81
NECAB3-213ENST00000488489 CADPS2Q86UW7 1296 aa26.35■■□□□ 1.81
NECAB3-213ENST00000488489 TRPM3Q9HCF6 1732 aaPredicted RBP26.34■■□□□ 1.81
NECAB3-213ENST00000488489 HOXC9P31274 260 aa26.33■■□□□ 1.81
NECAB3-213ENST00000488489 MSH6P52701 1360 aa26.33■■□□□ 1.81
NECAB3-213ENST00000488489 KIF24Q5T7B8 1368 aa26.32■■□□□ 1.8
NECAB3-213ENST00000488489 NFAT5O94916 1531 aa26.32■■□□□ 1.8
NECAB3-213ENST00000488489 DDX17Q92841 729 aaKnown RBP26.32■■□□□ 1.8
NECAB3-213ENST00000488489 MYH16Q9H6N6 1097 aa26.32■■□□□ 1.8
NECAB3-213ENST00000488489 B4GALNT3Q6L9W6 998 aa26.3■■□□□ 1.8
NECAB3-213ENST00000488489 BCAR3O75815 825 aa26.3■■□□□ 1.8
NECAB3-213ENST00000488489 TSR2Q969E8 191 aaKnown RBP26.3■■□□□ 1.8
NECAB3-213ENST00000488489 EXOC6Q8TAG9 804 aa26.29■■□□□ 1.8
NECAB3-213ENST00000488489 LTN1O94822 1766 aa26.29■■□□□ 1.8
NECAB3-213ENST00000488489 IL16Q14005 1332 aa26.29■■□□□ 1.8
NECAB3-213ENST00000488489 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
NECAB3-213ENST00000488489 EYA1Q99502 592 aa26.29■■□□□ 1.8
NECAB3-213ENST00000488489 ARHGEF10O15013 1369 aa26.28■■□□□ 1.8
NECAB3-213ENST00000488489 FANCIQ9NVI1 1328 aa26.28■■□□□ 1.8
NECAB3-213ENST00000488489 DLG5Q8TDM6 1919 aa26.28■■□□□ 1.8
NECAB3-213ENST00000488489 C20orf194Q5TEA3 1177 aa26.28■■□□□ 1.8
NECAB3-213ENST00000488489 KCNH5Q8NCM2 988 aa26.27■■□□□ 1.8
NECAB3-213ENST00000488489 IGSF1Q8N6C5 1336 aa26.26■■□□□ 1.79
NECAB3-213ENST00000488489 THUMPD2Q9BTF0 503 aaKnown RBP26.26■■□□□ 1.79
NECAB3-213ENST00000488489 PLEKHG5O94827 1062 aa26.26■■□□□ 1.79
NECAB3-213ENST00000488489 GCP02774 474 aa26.26■■□□□ 1.79
NECAB3-213ENST00000488489 KDRP35968 1356 aa26.25■■□□□ 1.79
NECAB3-213ENST00000488489 RTL1A6NKG5 1358 aa26.24■■□□□ 1.79
NECAB3-213ENST00000488489 SLIT3O75094 1523 aa26.24■■□□□ 1.79
NECAB3-213ENST00000488489 IP6K1Q92551 441 aa26.24■■□□□ 1.79
NECAB3-213ENST00000488489 USP19O94966 1318 aa26.24■■□□□ 1.79
NECAB3-213ENST00000488489 ALS2Q96Q42 1657 aa26.23■■□□□ 1.79
NECAB3-213ENST00000488489 LTV1Q96GA3 475 aaPredicted RBP26.23■■□□□ 1.79
NECAB3-213ENST00000488489 FAM83GA6ND36 823 aa26.22■■□□□ 1.79
NECAB3-213ENST00000488489 RARSP54136 660 aaKnown RBP26.22■■□□□ 1.79
NECAB3-213ENST00000488489 EXOSC9Q06265 439 aaKnown RBP26.21■■□□□ 1.79
NECAB3-213ENST00000488489 CRBNQ96SW2 442 aa26.21■■□□□ 1.79
NECAB3-213ENST00000488489 NPHP3Q7Z494 1330 aa26.21■■□□□ 1.79
NECAB3-213ENST00000488489 ARHGEF25Q86VW2 580 aa26.2■■□□□ 1.79
NECAB3-213ENST00000488489 BRINP3Q76B58 766 aa26.2■■□□□ 1.78
NECAB3-213ENST00000488489 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.2■■□□□ 1.78
NECAB3-213ENST00000488489 ZBTB7CA1YPR0 619 aa26.19■■□□□ 1.78
NECAB3-213ENST00000488489 DCTN1Q14203 1278 aa26.19■■□□□ 1.78
NECAB3-213ENST00000488489 PHRF1Q9P1Y6 1649 aaKnown RBP26.18■■□□□ 1.78
NECAB3-213ENST00000488489 LMOD3Q0VAK6 560 aa26.18■■□□□ 1.78
NECAB3-213ENST00000488489 CCDC136Q96JN2 1154 aa26.17■■□□□ 1.78
NECAB3-213ENST00000488489 PXDNQ92626 1479 aa26.17■■□□□ 1.78
NECAB3-213ENST00000488489 SLAIN2Q9P270 581 aa26.17■■□□□ 1.78
NECAB3-213ENST00000488489 LAS1LQ9Y4W2 734 aaKnown RBP26.17■■□□□ 1.78
NECAB3-213ENST00000488489 MED1Q15648 1581 aaPredicted RBP26.17■■□□□ 1.78
NECAB3-213ENST00000488489 ZNF853P0CG23 659 aa26.15■■□□□ 1.78
NECAB3-213ENST00000488489 MTHFSDQ2M296 383 aaKnown RBP26.15■■□□□ 1.78
NECAB3-213ENST00000488489 CALD1Q05682 793 aaKnown RBP26.15■■□□□ 1.78
NECAB3-213ENST00000488489 BCL2L13Q9BXK5 485 aa26.15■■□□□ 1.78
NECAB3-213ENST00000488489 CT47B1P0C2W7 299 aaPredicted RBP26.14■■□□□ 1.77
NECAB3-213ENST00000488489 IFT57Q9NWB7 429 aa26.14■■□□□ 1.77
NECAB3-213ENST00000488489 USHBP1Q8N6Y0 703 aa26.13■■□□□ 1.77
NECAB3-213ENST00000488489 NBPF6Q5VWK0 638 aa26.12■■□□□ 1.77
NECAB3-213ENST00000488489 NBPF4Q96M43 638 aa26.12■■□□□ 1.77
NECAB3-213ENST00000488489 GNAI1P63096 354 aa26.12■■□□□ 1.77
NECAB3-213ENST00000488489 AXIN2Q9Y2T1 843 aa26.12■■□□□ 1.77
NECAB3-213ENST00000488489 TNS3Q68CZ2 1445 aa26.12■■□□□ 1.77
NECAB3-213ENST00000488489 MCM10Q7L590 875 aa26.11■■□□□ 1.77
NECAB3-213ENST00000488489 SPATA31A3Q5VYP0 1347 aa26.11■■□□□ 1.77
NECAB3-213ENST00000488489 CFAP44Q96MT7 982 aa26.11■■□□□ 1.77
NECAB3-213ENST00000488489 MBIPQ9NS73 344 aa26.11■■□□□ 1.77
NECAB3-213ENST00000488489 ZC3H6P61129 1189 aaKnown RBP26.1■■□□□ 1.77
NECAB3-213ENST00000488489 CABLES1Q8TDN4 633 aa26.09■■□□□ 1.77
NECAB3-213ENST00000488489 FRAT1Q92837 279 aaPredicted RBP26.09■■□□□ 1.77
NECAB3-213ENST00000488489 MSH5O43196 834 aa26.09■■□□□ 1.77
NECAB3-213ENST00000488489 LRRC59Q96AG4 307 aaKnown RBP26.09■■□□□ 1.77
NECAB3-213ENST00000488489 RGPD2P0DJD1 1756 aa26.09■■□□□ 1.77
NECAB3-213ENST00000488489 SSH1Q8WYL5 1049 aa26.07■■□□□ 1.76
NECAB3-213ENST00000488489 PDE3AQ14432 1141 aa26.06■■□□□ 1.76
NECAB3-213ENST00000488489 GAS2L2Q8NHY3 880 aa26.06■■□□□ 1.76
NECAB3-213ENST00000488489 CANXP27824 592 aaKnown RBP26.06■■□□□ 1.76
NECAB3-213ENST00000488489 PANK1Q8TE04 598 aa26.05■■□□□ 1.76
NECAB3-213ENST00000488489 ANKRD24Q8TF21 1146 aa26.05■■□□□ 1.76
NECAB3-213ENST00000488489 TNNQ9UQP3 1299 aa26.05■■□□□ 1.76
NECAB3-213ENST00000488489 RGPD5Q99666 1765 aa26.04■■□□□ 1.76
NECAB3-213ENST00000488489 TSPYL6Q8N831 410 aa26.04■■□□□ 1.76
NECAB3-213ENST00000488489 SOS2Q07890 1332 aaPredicted RBP26.04■■□□□ 1.76
NECAB3-213ENST00000488489 SMC4Q9NTJ3 1288 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms