RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 EIF4A2Q14240 407 aaKnown RBP26.49■■□□□ 1.83
PHF1-209ENST00000487667 LMOD3Q0VAK6 560 aa26.49■■□□□ 1.83
PHF1-209ENST00000487667 NFE2L2Q16236 605 aa26.48■■□□□ 1.83
PHF1-209ENST00000487667 RTL1A6NKG5 1358 aa26.48■■□□□ 1.83
PHF1-209ENST00000487667 PEAK1Q9H792 1746 aa26.48■■□□□ 1.83
PHF1-209ENST00000487667 AMPHP49418 695 aa26.47■■□□□ 1.83
PHF1-209ENST00000487667 CADPS2Q86UW7 1296 aa26.47■■□□□ 1.83
PHF1-209ENST00000487667 KCNH5Q8NCM2 988 aa26.47■■□□□ 1.83
PHF1-209ENST00000487667 TRIM35Q9UPQ4 493 aa26.47■■□□□ 1.83
PHF1-209ENST00000487667 MSH6P52701 1360 aa26.46■■□□□ 1.83
PHF1-209ENST00000487667 ARHGEF10O15013 1369 aa26.46■■□□□ 1.83
PHF1-209ENST00000487667 MARF1Q9Y4F3 1742 aaKnown RBP26.46■■□□□ 1.83
PHF1-209ENST00000487667 HMOX1P09601 288 aa26.45■■□□□ 1.83
PHF1-209ENST00000487667 HSP90AB2PQ58FF8 381 aa26.43■■□□□ 1.82
PHF1-209ENST00000487667 ORAI2Q96SN7 254 aa26.43■■□□□ 1.82
PHF1-209ENST00000487667 RGPD1P0DJD0 1748 aa26.43■■□□□ 1.82
PHF1-209ENST00000487667 MST1RQ04912 1400 aa26.42■■□□□ 1.82
PHF1-209ENST00000487667 TSHZ2Q9NRE2 1034 aa26.42■■□□□ 1.82
PHF1-209ENST00000487667 SOX12O15370 315 aa26.41■■□□□ 1.82
PHF1-209ENST00000487667 XIRP1Q702N8 1843 aaKnown RBP26.39■■□□□ 1.82
PHF1-209ENST00000487667 FOXO3O43524 673 aa26.39■■□□□ 1.81
PHF1-209ENST00000487667 SULT6B1Q6IMI4 303 aa26.39■■□□□ 1.81
PHF1-209ENST00000487667 PHACTR3Q96KR7 559 aa26.38■■□□□ 1.81
PHF1-209ENST00000487667 HOXC9P31274 260 aa26.37■■□□□ 1.81
PHF1-209ENST00000487667 KRT28Q7Z3Y7 464 aa26.37■■□□□ 1.81
PHF1-209ENST00000487667 CCDC136Q96JN2 1154 aa26.37■■□□□ 1.81
PHF1-209ENST00000487667 NUTM2GQ5VZR2 741 aa26.37■■□□□ 1.81
PHF1-209ENST00000487667 KDRP35968 1356 aa26.37■■□□□ 1.81
PHF1-209ENST00000487667 PHRF1Q9P1Y6 1649 aaKnown RBP26.36■■□□□ 1.81
PHF1-209ENST00000487667 TRPM3Q9HCF6 1732 aaPredicted RBP26.36■■□□□ 1.81
PHF1-209ENST00000487667 NFAT5O94916 1531 aa26.36■■□□□ 1.81
PHF1-209ENST00000487667 IGSF1Q8N6C5 1336 aa26.35■■□□□ 1.81
PHF1-209ENST00000487667 FANCIQ9NVI1 1328 aa26.35■■□□□ 1.81
PHF1-209ENST00000487667 SLIT3O75094 1523 aa26.35■■□□□ 1.81
PHF1-209ENST00000487667 NPHP3Q7Z494 1330 aa26.34■■□□□ 1.81
PHF1-209ENST00000487667 IP6K1Q92551 441 aa26.33■■□□□ 1.81
PHF1-209ENST00000487667 PLIN1O60240 522 aa26.33■■□□□ 1.81
PHF1-209ENST00000487667 GNAI1P63096 354 aa26.33■■□□□ 1.81
PHF1-209ENST00000487667 B4GALNT3Q6L9W6 998 aa26.33■■□□□ 1.81
PHF1-209ENST00000487667 PDE3AQ14432 1141 aa26.32■■□□□ 1.8
PHF1-209ENST00000487667 EXOC6Q8TAG9 804 aa26.32■■□□□ 1.8
PHF1-209ENST00000487667 ZNF428Q96B54 188 aa26.32■■□□□ 1.8
PHF1-209ENST00000487667 IFT57Q9NWB7 429 aa26.32■■□□□ 1.8
PHF1-209ENST00000487667 USP19O94966 1318 aa26.32■■□□□ 1.8
PHF1-209ENST00000487667 RARSP54136 660 aaKnown RBP26.31■■□□□ 1.8
PHF1-209ENST00000487667 LTN1O94822 1766 aa26.31■■□□□ 1.8
PHF1-209ENST00000487667 AEBP1Q8IUX7 1158 aa26.29■■□□□ 1.8
PHF1-209ENST00000487667 SLAIN2Q9P270 581 aa26.29■■□□□ 1.8
PHF1-209ENST00000487667 XPCQ01831 940 aaPredicted RBP26.29■■□□□ 1.8
PHF1-209ENST00000487667 EYA1Q99502 592 aa26.29■■□□□ 1.8
PHF1-209ENST00000487667 LTBP4Q8N2S1 1624 aa26.28■■□□□ 1.8
PHF1-209ENST00000487667 BCAR3O75815 825 aa26.27■■□□□ 1.8
PHF1-209ENST00000487667 GCP02774 474 aa26.27■■□□□ 1.8
PHF1-209ENST00000487667 DLG5Q8TDM6 1919 aa26.27■■□□□ 1.8
PHF1-209ENST00000487667 CANXP27824 592 aaKnown RBP26.27■■□□□ 1.8
PHF1-209ENST00000487667 GAS2L2Q8NHY3 880 aa26.27■■□□□ 1.8
PHF1-209ENST00000487667 CRBNQ96SW2 442 aa26.27■■□□□ 1.8
PHF1-209ENST00000487667 ALS2Q96Q42 1657 aa26.27■■□□□ 1.8
PHF1-209ENST00000487667 MS4A1P11836 297 aa26.26■■□□□ 1.79
PHF1-209ENST00000487667 EXOSC9Q06265 439 aaKnown RBP26.26■■□□□ 1.79
PHF1-209ENST00000487667 TSR2Q969E8 191 aaKnown RBP26.26■■□□□ 1.79
PHF1-209ENST00000487667 CFAP44Q96MT7 982 aa26.26■■□□□ 1.79
PHF1-209ENST00000487667 AAMPQ13685 434 aa26.25■■□□□ 1.79
PHF1-209ENST00000487667 ZNF853P0CG23 659 aa26.24■■□□□ 1.79
PHF1-209ENST00000487667 HTATSF1O43719 755 aaKnown RBP26.24■■□□□ 1.79
PHF1-209ENST00000487667 LMOD2Q6P5Q4 547 aa26.24■■□□□ 1.79
PHF1-209ENST00000487667 ARHGEF25Q86VW2 580 aa26.24■■□□□ 1.79
PHF1-209ENST00000487667 DDX17Q92841 729 aaKnown RBP26.24■■□□□ 1.79
PHF1-209ENST00000487667 MYT1Q01538 1121 aa26.23■■□□□ 1.79
PHF1-209ENST00000487667 BRINP3Q76B58 766 aa26.23■■□□□ 1.79
PHF1-209ENST00000487667 HAP1P54257 671 aaPredicted RBP26.22■■□□□ 1.79
PHF1-209ENST00000487667 ALDH1L2Q3SY69 923 aa26.22■■□□□ 1.79
PHF1-209ENST00000487667 TNS3Q68CZ2 1445 aa26.21■■□□□ 1.79
PHF1-209ENST00000487667 C20orf194Q5TEA3 1177 aa26.2■■□□□ 1.79
PHF1-209ENST00000487667 RTF1Q92541 710 aaKnown RBP26.19■■□□□ 1.78
PHF1-209ENST00000487667 PXDNQ92626 1479 aa26.18■■□□□ 1.78
PHF1-209ENST00000487667 LAS1LQ9Y4W2 734 aaKnown RBP26.18■■□□□ 1.78
PHF1-209ENST00000487667 ABCC6O95255 1503 aa26.17■■□□□ 1.78
PHF1-209ENST00000487667 KIF16BQ96L93 1317 aa26.16■■□□□ 1.78
PHF1-209ENST00000487667 BRPF1P55201 1214 aaPredicted RBP26.16■■□□□ 1.78
PHF1-209ENST00000487667 SMC4Q9NTJ3 1288 aa26.16■■□□□ 1.78
PHF1-209ENST00000487667 MTHFSDQ2M296 383 aaKnown RBP26.16■■□□□ 1.78
PHF1-209ENST00000487667 ZKSCAN2Q63HK3 967 aa26.16■■□□□ 1.78
PHF1-209ENST00000487667 FRAT1Q92837 279 aaPredicted RBP26.16■■□□□ 1.78
PHF1-209ENST00000487667 IPO8O15397 1037 aaKnown RBP26.15■■□□□ 1.78
PHF1-209ENST00000487667 LTV1Q96GA3 475 aaPredicted RBP26.15■■□□□ 1.78
PHF1-209ENST00000487667 SPATA31A3Q5VYP0 1347 aa26.14■■□□□ 1.78
PHF1-209ENST00000487667 THUMPD2Q9BTF0 503 aaKnown RBP26.14■■□□□ 1.78
PHF1-209ENST00000487667 MBIPQ9NS73 344 aa26.14■■□□□ 1.78
PHF1-209ENST00000487667 MED1Q15648 1581 aaPredicted RBP26.13■■□□□ 1.77
PHF1-209ENST00000487667 NCAPD2Q15021 1401 aa26.12■■□□□ 1.77
PHF1-209ENST00000487667 FAM83GA6ND36 823 aa26.12■■□□□ 1.77
PHF1-209ENST00000487667 CHL1O00533 1208 aa26.12■■□□□ 1.77
PHF1-209ENST00000487667 GNAT3A8MTJ3 354 aa26.11■■□□□ 1.77
PHF1-209ENST00000487667 PLEKHG5O94827 1062 aa26.11■■□□□ 1.77
PHF1-209ENST00000487667 SSH1Q8WYL5 1049 aa26.11■■□□□ 1.77
PHF1-209ENST00000487667 ZBTB7CA1YPR0 619 aa26.1■■□□□ 1.77
PHF1-209ENST00000487667 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
PHF1-209ENST00000487667 KIAA0232Q92628 1395 aa26.1■■□□□ 1.77
PHF1-209ENST00000487667 MAP3K5Q99683 1374 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms