RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TRPM1Q7Z4N2 1603 aa14.48□□□□□ -0.09
TRA2B-214ENST00000487615 FRAT2O75474 233 aaPredicted RBP14.48□□□□□ -0.09
TRA2B-214ENST00000487615 RPAP2Q8IXW5 612 aaPredicted RBP14.48□□□□□ -0.09
TRA2B-214ENST00000487615 ERVK-7P63135 1459 aa14.48□□□□□ -0.09
TRA2B-214ENST00000487615 SYAP1Q96A49 352 aaPredicted RBP14.47□□□□□ -0.09
TRA2B-214ENST00000487615 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
TRA2B-214ENST00000487615 ZFYVE9O95405 1425 aa14.47□□□□□ -0.09
TRA2B-214ENST00000487615 RUFY2Q8WXA3 655 aa14.47□□□□□ -0.09
TRA2B-214ENST00000487615 PCDHB15Q9Y5E8 787 aa14.47□□□□□ -0.09
TRA2B-214ENST00000487615 TTC21BQ7Z4L5 1316 aa14.46□□□□□ -0.09
TRA2B-214ENST00000487615 KIF1BO60333 1816 aa14.46□□□□□ -0.09
TRA2B-214ENST00000487615 IFIT2P09913 472 aaKnown RBP14.46□□□□□ -0.09
TRA2B-214ENST00000487615 GORABQ5T7V8 394 aa14.46□□□□□ -0.09
TRA2B-214ENST00000487615 MBIPQ9NS73 344 aa14.46□□□□□ -0.1
TRA2B-214ENST00000487615 GNAT3A8MTJ3 354 aa14.45□□□□□ -0.1
TRA2B-214ENST00000487615 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
TRA2B-214ENST00000487615 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
TRA2B-214ENST00000487615 ZMYM3Q14202 1370 aa14.45□□□□□ -0.1
TRA2B-214ENST00000487615 SURF6O75683 361 aaKnown RBP14.45□□□□□ -0.1
TRA2B-214ENST00000487615 TAF7LQ5H9L4 462 aa14.45□□□□□ -0.1
TRA2B-214ENST00000487615 MIS18AQ9NYP9 233 aa14.45□□□□□ -0.1
TRA2B-214ENST00000487615 YEATS2Q9ULM3 1422 aa14.45□□□□□ -0.1
TRA2B-214ENST00000487615 FOXD4L5Q5VV16 416 aaPredicted RBP14.44□□□□□ -0.1
TRA2B-214ENST00000487615 FOXD4L4Q8WXT5 416 aaPredicted RBP14.44□□□□□ -0.1
TRA2B-214ENST00000487615 FAM83GA6ND36 823 aa14.44□□□□□ -0.1
TRA2B-214ENST00000487615 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.12e-7■□□□□ 10.7
TRA2B-214ENST00000487615 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
TRA2B-214ENST00000487615 RLBP1P12271 317 aa14.43□□□□□ -0.1
TRA2B-214ENST00000487615 MSNP26038 577 aaKnown RBP14.43□□□□□ -0.1
TRA2B-214ENST00000487615 NUCB2P80303 420 aa14.43□□□□□ -0.1
TRA2B-214ENST00000487615 AIMP1Q12904 312 aaKnown RBP14.43□□□□□ -0.1
TRA2B-214ENST00000487615 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
TRA2B-214ENST00000487615 ERC2O15083 957 aa14.43□□□□□ -0.1
TRA2B-214ENST00000487615 DNTTIP2Q5QJE6 756 aaKnown RBP14.43□□□□□ -0.1
TRA2B-214ENST00000487615 RIC3Q7Z5B4 369 aa14.43□□□□□ -0.1
TRA2B-214ENST00000487615 KCNH5Q8NCM2 988 aa14.43□□□□□ -0.1
TRA2B-214ENST00000487615 PHF8Q9UPP1 1060 aa14.43□□□□□ -0.1
TRA2B-214ENST00000487615 EFCAB6Q5THR3 1501 aa14.42□□□□□ -0.1
TRA2B-214ENST00000487615 RABEP1Q15276 862 aa14.42□□□□□ -0.1
TRA2B-214ENST00000487615 ARHGAP45Q92619 1136 aa14.42□□□□□ -0.1
TRA2B-214ENST00000487615 TNNQ9UQP3 1299 aa14.42□□□□□ -0.1
TRA2B-214ENST00000487615 HECW2Q9P2P5 1572 aa14.42□□□□□ -0.1
TRA2B-214ENST00000487615 HDAC1Q13547 482 aaPredicted RBP14.42□□□□□ -0.1
TRA2B-214ENST00000487615 SRCIN1Q9C0H9 1055 aa14.42□□□□□ -0.1
TRA2B-214ENST00000487615 CLTCL1P53675 1640 aa14.42□□□□□ -0.1
TRA2B-214ENST00000487615 EVA1CP58658 441 aa14.41□□□□□ -0.1
TRA2B-214ENST00000487615 TAOK2Q9UL54 1235 aa14.41□□□□□ -0.1
TRA2B-214ENST00000487615 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
TRA2B-214ENST00000487615 CLASRPQ8N2M8 674 aaKnown RBP14.41□□□□□ -0.1
TRA2B-214ENST00000487615 LRRCC1Q9C099 1032 aa14.41□□□□□ -0.1
TRA2B-214ENST00000487615 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
TRA2B-214ENST00000487615 ZKSCAN1P17029 563 aaPredicted RBP14.41□□□□□ -0.1
TRA2B-214ENST00000487615 NPHP1O15259 732 aa14.4□□□□□ -0.1
TRA2B-214ENST00000487615 C8orf34Q49A92 452 aa14.4□□□□□ -0.1
TRA2B-214ENST00000487615 SPHKAPQ2M3C7 1700 aa14.4□□□□□ -0.1
TRA2B-214ENST00000487615 CLASP1Q7Z460 1538 aa14.39□□□□□ -0.11
TRA2B-214ENST00000487615 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
TRA2B-214ENST00000487615 CSPP1Q1MSJ5 1256 aa14.39□□□□□ -0.11
TRA2B-214ENST00000487615 PHACTR3Q96KR7 559 aa14.39□□□□□ -0.11
TRA2B-214ENST00000487615 RSPH6AQ9H0K4 717 aa14.39□□□□□ -0.11
TRA2B-214ENST00000487615 PTPRCP08575 1304 aa14.39□□□□□ -0.11
TRA2B-214ENST00000487615 XPCQ01831 940 aaPredicted RBP14.39□□□□□ -0.11
TRA2B-214ENST00000487615 TAF7Q15545 349 aaPredicted RBP14.39□□□□□ -0.11
TRA2B-214ENST00000487615 KDM2BQ8NHM5 1336 aa14.38□□□□□ -0.11
TRA2B-214ENST00000487615 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
TRA2B-214ENST00000487615 EIF4A2Q14240 407 aaKnown RBP14.38□□□□□ -0.11
TRA2B-214ENST00000487615 HTATSF1O43719 755 aaKnown RBP14.38□□□□□ -0.11
TRA2B-214ENST00000487615 TATP17735 454 aaPredicted RBP14.38□□□□□ -0.11
TRA2B-214ENST00000487615 NCKAP5LQ9HCH0 1330 aa14.38□□□□□ -0.11
TRA2B-214ENST00000487615 AEBP1Q8IUX7 1158 aa14.38□□□□□ -0.11
TRA2B-214ENST00000487615 CNTROBQ8N137 903 aa14.38□□□□□ -0.11
TRA2B-214ENST00000487615 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
TRA2B-214ENST00000487615 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
TRA2B-214ENST00000487615 ATP6V1DQ9Y5K8 247 aa14.37□□□□□ -0.11
TRA2B-214ENST00000487615 ZNF521Q96K83 1311 aa14.37□□□□□ -0.11
TRA2B-214ENST00000487615 CCDC9Q9Y3X0 531 aaKnown RBP14.37□□□□□ -0.11
TRA2B-214ENST00000487615 BTBD11A6QL63 1104 aa14.37□□□□□ -0.11
TRA2B-214ENST00000487615 GLIPR1L2Q4G1C9 344 aa14.37□□□□□ -0.11
TRA2B-214ENST00000487615 K7ELQ4 463 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-214ENST00000487615 NEK4P51957 841 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 TRAK2O60296 914 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 VAMP4O75379 141 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 PHF14O94880 888 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 BMP2KLQ5H9B9 411 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 ABCC3O15438 1527 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 F6X3S4 739 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 FOXD4L6Q3SYB3 417 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-214ENST00000487615 FOXD4L3Q6VB84 417 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-214ENST00000487615 MRPL50Q8N5N7 158 aaKnown RBP14.36□□□□□ -0.11
TRA2B-214ENST00000487615 C8orf58Q8NAV2 365 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 TRIM35Q9UPQ4 493 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 E9PCH4 1651 aa14.36□□□□□ -0.11
TRA2B-214ENST00000487615 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
TRA2B-214ENST00000487615 MADDQ8WXG6 1647 aa14.35□□□□□ -0.11
TRA2B-214ENST00000487615 RBM33Q96EV2 1170 aaKnown RBP14.35□□□□□ -0.11
TRA2B-214ENST00000487615 ABCA9Q8IUA7 1624 aa14.35□□□□□ -0.11
TRA2B-214ENST00000487615 RNF20Q5VTR2 975 aa14.35□□□□□ -0.11
TRA2B-214ENST00000487615 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms