RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TOPAZ1Q8N9V7 1692 aa33.22■■■□□ 2.91
HLA-C-208ENST00000487245 LMOD3Q0VAK6 560 aa33.21■■■□□ 2.91
HLA-C-208ENST00000487245 DDX19BQ9UMR2 479 aa33.21■■■□□ 2.91
HLA-C-208ENST00000487245 ARHGAP23Q9P227 1491 aa33.21■■■□□ 2.91
HLA-C-208ENST00000487245 SLC4A3P48751 1232 aa33.2■■■□□ 2.91
HLA-C-208ENST00000487245 HMOX1P09601 288 aa33.2■■■□□ 2.9
HLA-C-208ENST00000487245 TRIM27P14373 513 aa33.19■■■□□ 2.9
HLA-C-208ENST00000487245 BRPF1P55201 1214 aaPredicted RBP33.19■■■□□ 2.9
HLA-C-208ENST00000487245 NFKBIBQ15653 356 aa33.18■■■□□ 2.9
HLA-C-208ENST00000487245 PHACTR3Q96KR7 559 aa33.18■■■□□ 2.9
HLA-C-208ENST00000487245 TBX22Q9Y458 520 aa33.18■■■□□ 2.9
HLA-C-208ENST00000487245 TTC21BQ7Z4L5 1316 aa33.18■■■□□ 2.9
HLA-C-208ENST00000487245 GNAI1P63096 354 aa33.17■■■□□ 2.9
HLA-C-208ENST00000487245 NOB1Q9ULX3 412 aaKnown RBP33.17■■■□□ 2.9
HLA-C-208ENST00000487245 NRKQ7Z2Y5 1582 aa33.17■■■□□ 2.9
HLA-C-208ENST00000487245 IFT57Q9NWB7 429 aa33.16■■■□□ 2.9
HLA-C-208ENST00000487245 HDAC1Q13547 482 aaPredicted RBP33.16■■■□□ 2.9
HLA-C-208ENST00000487245 CEBPAP49715 358 aaPredicted RBP33.15■■■□□ 2.9
HLA-C-208ENST00000487245 ACEP12821 1306 aa33.15■■■□□ 2.9
HLA-C-208ENST00000487245 PTPRUQ92729 1446 aa33.14■■■□□ 2.9
HLA-C-208ENST00000487245 RRS1Q15050 365 aaKnown RBP33.13■■■□□ 2.89
HLA-C-208ENST00000487245 DIP2AQ14689 1571 aa33.13■■■□□ 2.89
HLA-C-208ENST00000487245 SEC24BO95487 1268 aa33.12■■■□□ 2.89
HLA-C-208ENST00000487245 THEMISQ8N1K5 641 aaPredicted RBP33.12■■■□□ 2.89
HLA-C-208ENST00000487245 USP6P35125 1406 aa33.12■■■□□ 2.89
HLA-C-208ENST00000487245 PTCH1Q13635 1447 aa33.11■■■□□ 2.89
HLA-C-208ENST00000487245 ZNF853P0CG23 659 aa33.11■■■□□ 2.89
HLA-C-208ENST00000487245 OVOS2A0A0J9YW53 1432 aa33.1■■■□□ 2.89
HLA-C-208ENST00000487245 OVOS2Q6IE36 1432 aa33.1■■■□□ 2.89
HLA-C-208ENST00000487245 ITPRIPQ8IWB1 547 aa33.1■■■□□ 2.89
HLA-C-208ENST00000487245 SLC26A8Q96RN1 970 aa33.1■■■□□ 2.89
HLA-C-208ENST00000487245 FER1L4A9Z1Z3 1794 aa33.1■■■□□ 2.89
HLA-C-208ENST00000487245 AMOTL2Q9Y2J4 779 aa33.1■■■□□ 2.89
HLA-C-208ENST00000487245 BECN1Q14457 450 aa33.08■■■□□ 2.89
HLA-C-208ENST00000487245 ARHGAP45Q92619 1136 aa33.07■■■□□ 2.88
HLA-C-208ENST00000487245 CHMP4BQ9H444 224 aaKnown RBP33.07■■■□□ 2.88
HLA-C-208ENST00000487245 TTC21AQ8NDW8 1320 aa33.06■■■□□ 2.88
HLA-C-208ENST00000487245 VAMP4O75379 141 aa33.05■■■□□ 2.88
HLA-C-208ENST00000487245 UPF2Q9HAU5 1272 aaKnown RBP33.05■■■□□ 2.88
HLA-C-208ENST00000487245 USP31Q70CQ4 1352 aa33.05■■■□□ 2.88
HLA-C-208ENST00000487245 TMEM57Q8N5G2 664 aa33.05■■■□□ 2.88
HLA-C-208ENST00000487245 CFAP44Q96MT7 982 aa33.05■■■□□ 2.88
HLA-C-208ENST00000487245 TBC1D32Q96NH3 1257 aa33.05■■■□□ 2.88
HLA-C-208ENST00000487245 NALCNQ8IZF0 1738 aa33.05■■■□□ 2.88
HLA-C-208ENST00000487245 SSH2Q76I76 1423 aa33.04■■■□□ 2.88
HLA-C-208ENST00000487245 DLG5Q8TDM6 1919 aa33.03■■■□□ 2.88
HLA-C-208ENST00000487245 SMC5Q8IY18 1101 aa33.03■■■□□ 2.88
HLA-C-208ENST00000487245 ZBTB40Q9NUA8 1239 aa33.03■■■□□ 2.88
HLA-C-208ENST00000487245 EIF4A2Q14240 407 aaKnown RBP33.01■■■□□ 2.88
HLA-C-208ENST00000487245 MRPL50Q8N5N7 158 aaKnown RBP33.01■■■□□ 2.87
HLA-C-208ENST00000487245 MBIPQ9NS73 344 aa33.01■■■□□ 2.87
HLA-C-208ENST00000487245 THUMPD2Q9BTF0 503 aaKnown RBP33■■■□□ 2.87
HLA-C-208ENST00000487245 GSE1Q14687 1217 aa32.99■■■□□ 2.87
HLA-C-208ENST00000487245 NUTM2FA1L443 756 aa32.96■■■□□ 2.87
HLA-C-208ENST00000487245 PIK3R4Q99570 1358 aa32.96■■■□□ 2.87
HLA-C-208ENST00000487245 SULT6B1Q6IMI4 303 aa32.95■■■□□ 2.86
HLA-C-208ENST00000487245 RIMS1Q86UR5 1692 aaKnown RBP32.95■■■□□ 2.86
HLA-C-208ENST00000487245 HAP1P54257 671 aaPredicted RBP32.94■■■□□ 2.86
HLA-C-208ENST00000487245 TWISTNBQ3B726 338 aaPredicted RBP32.94■■■□□ 2.86
HLA-C-208ENST00000487245 XRN1Q8IZH2 1706 aaKnown RBP32.94■■■□□ 2.86
HLA-C-208ENST00000487245 ANKARQ7Z5J8 1434 aa32.92■■■□□ 2.86
HLA-C-208ENST00000487245 TSPYL6Q8N831 410 aa32.92■■■□□ 2.86
HLA-C-208ENST00000487245 RGPD1P0DJD0 1748 aa32.91■■■□□ 2.86
HLA-C-208ENST00000487245 PEAK1Q9H792 1746 aa32.91■■■□□ 2.86
HLA-C-208ENST00000487245 NGDNQ8NEJ9 315 aaKnown RBP32.91■■■□□ 2.86
HLA-C-208ENST00000487245 ARHGEF10O15013 1369 aa32.89■■■□□ 2.86
HLA-C-208ENST00000487245 FRAT2O75474 233 aaPredicted RBP32.88■■■□□ 2.85
HLA-C-208ENST00000487245 API5Q9BZZ5 524 aaKnown RBP32.88■■■□□ 2.85
HLA-C-208ENST00000487245 HSP90AB2PQ58FF8 381 aa32.87■■■□□ 2.85
HLA-C-208ENST00000487245 PLPPR3Q6T4P5 718 aa32.87■■■□□ 2.85
HLA-C-208ENST00000487245 AEBP1Q8IUX7 1158 aa32.87■■■□□ 2.85
HLA-C-208ENST00000487245 SBNO1A3KN83 1393 aa32.86■■■□□ 2.85
HLA-C-208ENST00000487245 ABCC4O15439 1325 aa32.86■■■□□ 2.85
HLA-C-208ENST00000487245 FAM83GA6ND36 823 aa32.86■■■□□ 2.85
HLA-C-208ENST00000487245 ZBTB7BO15156 539 aaPredicted RBP32.86■■■□□ 2.85
HLA-C-208ENST00000487245 NUCB1Q02818 461 aa32.86■■■□□ 2.85
HLA-C-208ENST00000487245 C8orf58Q8NAV2 365 aa32.86■■■□□ 2.85
HLA-C-208ENST00000487245 KIF24Q5T7B8 1368 aa32.85■■■□□ 2.85
HLA-C-208ENST00000487245 ANTXR1Q9H6X2 564 aa32.85■■■□□ 2.85
HLA-C-208ENST00000487245 FLT4P35916 1363 aa32.85■■■□□ 2.85
HLA-C-208ENST00000487245 MAP3K19Q56UN5 1328 aa32.83■■■□□ 2.85
HLA-C-208ENST00000487245 FMN2Q9NZ56 1722 aa32.83■■■□□ 2.85
HLA-C-208ENST00000487245 CHL1O00533 1208 aa32.82■■■□□ 2.85
HLA-C-208ENST00000487245 CEP170BQ9Y4F5 1589 aaPredicted RBP32.82■■■□□ 2.84
HLA-C-208ENST00000487245 ELL2O00472 640 aaPredicted RBP32.82■■■□□ 2.84
HLA-C-208ENST00000487245 DCTN1Q14203 1278 aa32.82■■■□□ 2.84
HLA-C-208ENST00000487245 TBC1D2Q9BYX2 928 aa32.82■■■□□ 2.84
HLA-C-208ENST00000487245 KIAA0232Q92628 1395 aa32.81■■■□□ 2.84
HLA-C-208ENST00000487245 RGPD8O14715 1765 aaPredicted RBP32.81■■■□□ 2.84
HLA-C-208ENST00000487245 GCC1Q96CN9 775 aa32.79■■■□□ 2.84
HLA-C-208ENST00000487245 C22orf23Q9BZE7 217 aa32.78■■■□□ 2.84
HLA-C-208ENST00000487245 KCNA6P17658 529 aa32.77■■■□□ 2.84
HLA-C-208ENST00000487245 PIK3C2AO00443 1686 aa32.76■■■□□ 2.83
HLA-C-208ENST00000487245 KDRP35968 1356 aa32.76■■■□□ 2.83
HLA-C-208ENST00000487245 AMPHP49418 695 aa32.76■■■□□ 2.83
HLA-C-208ENST00000487245 CHD1LQ86WJ1 897 aa32.75■■■□□ 2.83
HLA-C-208ENST00000487245 USP54Q70EL1 1684 aa32.74■■■□□ 2.83
HLA-C-208ENST00000487245 SOX12O15370 315 aa32.73■■■□□ 2.83
HLA-C-208ENST00000487245 IGSF1Q8N6C5 1336 aa32.72■■■□□ 2.83
HLA-C-208ENST00000487245 CRB1P82279 1406 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms