RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 NFAT5O94916 1531 aa11.38□□□□□ -0.59
NUDCD3-209ENST00000487118 SBNO1A3KN83 1393 aa11.38□□□□□ -0.59
NUDCD3-209ENST00000487118 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
NUDCD3-209ENST00000487118 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 SPATA31A6Q5VVP1 1343 aa11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 APAF1O14727 1248 aa11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 PPM1GO15355 546 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 RBM6P78332 1123 aaKnown RBP11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 PLEKHF1Q96S99 279 aa11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 PHRF1Q9P1Y6 1649 aaKnown RBP11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 PXDNQ92626 1479 aa11.37□□□□□ -0.59
NUDCD3-209ENST00000487118 USP19O94966 1318 aa11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 BRINP3Q76B58 766 aa11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 GTF3C3Q9Y5Q9 886 aa11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 RTL1A6NKG5 1358 aa11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 FLT4P35916 1363 aa11.36□□□□□ -0.59
NUDCD3-209ENST00000487118 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
NUDCD3-209ENST00000487118 LRP5O75197 1615 aa11.35□□□□□ -0.59
NUDCD3-209ENST00000487118 FCHSD2O94868 740 aa11.35□□□□□ -0.59
NUDCD3-209ENST00000487118 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
NUDCD3-209ENST00000487118 SALL2Q9Y467 1007 aaPredicted RBP11.35□□□□□ -0.59
NUDCD3-209ENST00000487118 EIF4A2Q14240 407 aaKnown RBP11.34□□□□□ -0.59
NUDCD3-209ENST00000487118 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
NUDCD3-209ENST00000487118 NUTM2GQ5VZR2 741 aa11.34□□□□□ -0.59
NUDCD3-209ENST00000487118 TCP11L2Q8N4U5 519 aa11.34□□□□□ -0.59
NUDCD3-209ENST00000487118 KCNH5Q8NCM2 988 aa11.34□□□□□ -0.59
NUDCD3-209ENST00000487118 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
NUDCD3-209ENST00000487118 TNS3Q68CZ2 1445 aa11.34□□□□□ -0.59
NUDCD3-209ENST00000487118 XPCQ01831 940 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-209ENST00000487118 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
NUDCD3-209ENST00000487118 C8orf37Q96NL8 207 aa11.33□□□□□ -0.6
NUDCD3-209ENST00000487118 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 LTN1O94822 1766 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 SOX12O15370 315 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 HOXC9P31274 260 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 TRMT2AQ8IZ69 625 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 SPATA31A3Q5VYP0 1347 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 CRYBG1Q9Y4K1 1723 aa11.32□□□□□ -0.6
NUDCD3-209ENST00000487118 AMPHP49418 695 aa11.31□□□□□ -0.6
NUDCD3-209ENST00000487118 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
NUDCD3-209ENST00000487118 SOS2Q07890 1332 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-209ENST00000487118 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
NUDCD3-209ENST00000487118 ADAMTS2O95450 1211 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 GCP02774 474 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 PRKAR2BP31323 418 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 DEFB132Q7Z7B7 95 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 WDR63Q8IWG1 891 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 IP6K1Q92551 441 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 NGLY1Q96IV0 654 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
NUDCD3-209ENST00000487118 KDRP35968 1356 aa11.29□□□□□ -0.6
NUDCD3-209ENST00000487118 HMOX1P09601 288 aa11.29□□□□□ -0.6
NUDCD3-209ENST00000487118 DUSP27Q5VZP5 1158 aa11.29□□□□□ -0.6
NUDCD3-209ENST00000487118 ARHGEF25Q86VW2 580 aa11.29□□□□□ -0.6
NUDCD3-209ENST00000487118 RRP7AQ9Y3A4 280 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-209ENST00000487118 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-209ENST00000487118 ABCC6O95255 1503 aa11.29□□□□□ -0.6
NUDCD3-209ENST00000487118 E9PSI1 815 aa11.28□□□□□ -0.6
NUDCD3-209ENST00000487118 C1QTNF8P60827 252 aa11.28□□□□□ -0.6
NUDCD3-209ENST00000487118 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
NUDCD3-209ENST00000487118 CCDC125Q86Z20 511 aa11.28□□□□□ -0.6
NUDCD3-209ENST00000487118 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
NUDCD3-209ENST00000487118 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
NUDCD3-209ENST00000487118 CAPN15O75808 1086 aa11.27□□□□□ -0.61
NUDCD3-209ENST00000487118 NEFMP07197 916 aa11.27□□□□□ -0.61
NUDCD3-209ENST00000487118 SULT6B1Q6IMI4 303 aa11.27□□□□□ -0.61
NUDCD3-209ENST00000487118 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-209ENST00000487118 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 EYA1Q99502 592 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 IL16Q14005 1332 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 CAMTA1Q9Y6Y1 1673 aa11.26□□□□□ -0.61
NUDCD3-209ENST00000487118 NEFLP07196 543 aa11.25□□□□□ -0.61
NUDCD3-209ENST00000487118 RIPK4P57078 832 aa11.25□□□□□ -0.61
NUDCD3-209ENST00000487118 LRRC59Q96AG4 307 aaKnown RBP11.25□□□□□ -0.61
NUDCD3-209ENST00000487118 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
NUDCD3-209ENST00000487118 COL18A1P39060 1754 aa11.25□□□□□ -0.61
NUDCD3-209ENST00000487118 CPDO75976 1380 aa11.25□□□□□ -0.61
NUDCD3-209ENST00000487118 EP400Q96L91 3159 aa11.24□□□□□ -0.61
NUDCD3-209ENST00000487118 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
NUDCD3-209ENST00000487118 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
NUDCD3-209ENST00000487118 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-209ENST00000487118 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-209ENST00000487118 LMO7Q8WWI1 1683 aa11.24□□□□□ -0.61
NUDCD3-209ENST00000487118 LMOD3Q0VAK6 560 aa11.23□□□□□ -0.61
NUDCD3-209ENST00000487118 FKBP8Q14318 412 aa11.22□□□□□ -0.61
NUDCD3-209ENST00000487118 ERICH6BQ5W0A0 696 aa11.22□□□□□ -0.61
NUDCD3-209ENST00000487118 DLG5Q8TDM6 1919 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms