RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 RRP7AQ9Y3A4 280 aaKnown RBP15.15■□□□□ 0.02
PRKCB-207ENST00000486868 MSH6P52701 1360 aa15.14■□□□□ 0.01
PRKCB-207ENST00000486868 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
PRKCB-207ENST00000486868 RBM33Q96EV2 1170 aaKnown RBP15.14■□□□□ 0.01
PRKCB-207ENST00000486868 KDRP35968 1356 aa15.13■□□□□ 0.01
PRKCB-207ENST00000486868 AMPHP49418 695 aa15.13■□□□□ 0.01
PRKCB-207ENST00000486868 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
PRKCB-207ENST00000486868 ORAI2Q96SN7 254 aa15.13■□□□□ 0.01
PRKCB-207ENST00000486868 USP19O94966 1318 aa15.13■□□□□ 0.01
PRKCB-207ENST00000486868 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
PRKCB-207ENST00000486868 IRX6P78412 446 aaPredicted RBP15.12■□□□□ 0.01
PRKCB-207ENST00000486868 KRT28Q7Z3Y7 464 aa15.12■□□□□ 0.01
PRKCB-207ENST00000486868 IGSF1Q8N6C5 1336 aa15.12■□□□□ 0.01
PRKCB-207ENST00000486868 HOXC9P31274 260 aa15.11■□□□□ 0.01
PRKCB-207ENST00000486868 IP6K1Q92551 441 aa15.11■□□□□ 0.01
PRKCB-207ENST00000486868 ZNF428Q96B54 188 aa15.11■□□□□ 0.01
PRKCB-207ENST00000486868 PEAK1Q9H792 1746 aa15.11■□□□□ 0.01
PRKCB-207ENST00000486868 STRCQ7RTU9 1775 aa15.11■□□□□ 0.01
PRKCB-207ENST00000486868 FOXO3O43524 673 aa15.1■□□□□ 0.01
PRKCB-207ENST00000486868 HMOX1P09601 288 aa15.1■□□□□ 0.01
PRKCB-207ENST00000486868 PHACTR3Q96KR7 559 aa15.1■□□□□ 0.01
PRKCB-207ENST00000486868 SLIT3O75094 1523 aa15.1■□□□□ 0.01
PRKCB-207ENST00000486868 NPHP3Q7Z494 1330 aa15.1■□□□□ 0.01
PRKCB-207ENST00000486868 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
PRKCB-207ENST00000486868 STRCP1A6NGW2 1772 aa15.09■□□□□ 0.01
PRKCB-207ENST00000486868 NFAT5O94916 1531 aa15.09■□□□□ 0.01
PRKCB-207ENST00000486868 SULT6B1Q6IMI4 303 aa15.09■□□□□ 0.01
PRKCB-207ENST00000486868 MARF1Q9Y4F3 1742 aaKnown RBP15.09■□□□□ 0.01
PRKCB-207ENST00000486868 PHRF1Q9P1Y6 1649 aaKnown RBP15.08■□□□□ 0
PRKCB-207ENST00000486868 PDE3AQ14432 1141 aa15.08■□□□□ 0
PRKCB-207ENST00000486868 IFT57Q9NWB7 429 aa15.08■□□□□ 0
PRKCB-207ENST00000486868 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
PRKCB-207ENST00000486868 ZNF853P0CG23 659 aa15.07■□□□□ 0
PRKCB-207ENST00000486868 RARSP54136 660 aaKnown RBP15.07■□□□□ 0
PRKCB-207ENST00000486868 GNAI1P63096 354 aa15.07■□□□□ 0
PRKCB-207ENST00000486868 ARHGEF25Q86VW2 580 aa15.07■□□□□ 0
PRKCB-207ENST00000486868 EYA1Q99502 592 aa15.07■□□□□ 0
PRKCB-207ENST00000486868 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
PRKCB-207ENST00000486868 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
PRKCB-207ENST00000486868 GCP02774 474 aa15.06■□□□□ 0
PRKCB-207ENST00000486868 AAMPQ13685 434 aa15.06■□□□□ 0
PRKCB-207ENST00000486868 GAS2L2Q8NHY3 880 aa15.06■□□□□ 0
PRKCB-207ENST00000486868 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
PRKCB-207ENST00000486868 NUTM2GQ5VZR2 741 aa15.04■□□□□ -0
PRKCB-207ENST00000486868 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
PRKCB-207ENST00000486868 CFAP44Q96MT7 982 aa15.04■□□□□ -0
PRKCB-207ENST00000486868 SOX12O15370 315 aa15.03■□□□□ -0
PRKCB-207ENST00000486868 MS4A1P11836 297 aa15.03■□□□□ -0
PRKCB-207ENST00000486868 ALDH1L2Q3SY69 923 aa15.03■□□□□ -0
PRKCB-207ENST00000486868 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
PRKCB-207ENST00000486868 NCAPD2Q15021 1401 aa15.02■□□□□ -0
PRKCB-207ENST00000486868 PLEKHG2Q9H7P9 1386 aa15.02■□□□□ -0
PRKCB-207ENST00000486868 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
PRKCB-207ENST00000486868 HAP1P54257 671 aaPredicted RBP15.02■□□□□ -0
PRKCB-207ENST00000486868 CCDC136Q96JN2 1154 aa15.02■□□□□ -0
PRKCB-207ENST00000486868 ABCC6O95255 1503 aa15.02□□□□□ -0.01
PRKCB-207ENST00000486868 TNS3Q68CZ2 1445 aa15.01□□□□□ -0.01
PRKCB-207ENST00000486868 SPATA31A3Q5VYP0 1347 aa15.01□□□□□ -0.01
PRKCB-207ENST00000486868 PLIN1O60240 522 aa15.01□□□□□ -0.01
PRKCB-207ENST00000486868 BCAR3O75815 825 aa15.01□□□□□ -0.01
PRKCB-207ENST00000486868 EXOSC9Q06265 439 aaKnown RBP15.01□□□□□ -0.01
PRKCB-207ENST00000486868 ALS2Q96Q42 1657 aa15□□□□□ -0.01
PRKCB-207ENST00000486868 BRINP3Q76B58 766 aa15□□□□□ -0.01
PRKCB-207ENST00000486868 CRBNQ96SW2 442 aa15□□□□□ -0.01
PRKCB-207ENST00000486868 BABAM1Q9NWV8 329 aa15□□□□□ -0.01
PRKCB-207ENST00000486868 SLAIN2Q9P270 581 aa15□□□□□ -0.01
PRKCB-207ENST00000486868 PXDNQ92626 1479 aa15□□□□□ -0.01
PRKCB-207ENST00000486868 SOS2Q07890 1332 aaPredicted RBP14.99□□□□□ -0.01
PRKCB-207ENST00000486868 B4GALNT3Q6L9W6 998 aa14.99□□□□□ -0.01
PRKCB-207ENST00000486868 TSR2Q969E8 191 aaKnown RBP14.99□□□□□ -0.01
PRKCB-207ENST00000486868 CHL1O00533 1208 aa14.98□□□□□ -0.01
PRKCB-207ENST00000486868 MTHFSDQ2M296 383 aaKnown RBP14.98□□□□□ -0.01
PRKCB-207ENST00000486868 MED1Q15648 1581 aaPredicted RBP14.98□□□□□ -0.01
PRKCB-207ENST00000486868 CPDO75976 1380 aa14.98□□□□□ -0.01
PRKCB-207ENST00000486868 XPCQ01831 940 aaPredicted RBP14.97□□□□□ -0.01
PRKCB-207ENST00000486868 RTF1Q92541 710 aaKnown RBP14.97□□□□□ -0.01
PRKCB-207ENST00000486868 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
PRKCB-207ENST00000486868 XIRP1Q702N8 1843 aaKnown RBP14.96□□□□□ -0.01
PRKCB-207ENST00000486868 KIF16BQ96L93 1317 aa14.96□□□□□ -0.01
PRKCB-207ENST00000486868 IPO8O15397 1037 aaKnown RBP14.96□□□□□ -0.01
PRKCB-207ENST00000486868 CRB1P82279 1406 aa14.96□□□□□ -0.01
PRKCB-207ENST00000486868 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.01
PRKCB-207ENST00000486868 ZKSCAN2Q63HK3 967 aa14.96□□□□□ -0.01
PRKCB-207ENST00000486868 MBIPQ9NS73 344 aa14.96□□□□□ -0.01
PRKCB-207ENST00000486868 SOS1Q07889 1333 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-207ENST00000486868 VAMP4O75379 141 aa14.95□□□□□ -0.02
PRKCB-207ENST00000486868 AMOTQ4VCS5 1084 aa14.95□□□□□ -0.02
PRKCB-207ENST00000486868 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
PRKCB-207ENST00000486868 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
PRKCB-207ENST00000486868 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
PRKCB-207ENST00000486868 CANXP27824 592 aaKnown RBP14.94□□□□□ -0.02
PRKCB-207ENST00000486868 NBPF6Q5VWK0 638 aa14.94□□□□□ -0.02
PRKCB-207ENST00000486868 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
PRKCB-207ENST00000486868 NBPF4Q96M43 638 aa14.94□□□□□ -0.02
PRKCB-207ENST00000486868 ANKRD24Q8TF21 1146 aa14.93□□□□□ -0.02
PRKCB-207ENST00000486868 THUMPD2Q9BTF0 503 aaKnown RBP14.93□□□□□ -0.02
PRKCB-207ENST00000486868 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
PRKCB-207ENST00000486868 LTN1O94822 1766 aa14.93□□□□□ -0.02
PRKCB-207ENST00000486868 FAM83GA6ND36 823 aa14.92□□□□□ -0.02
PRKCB-207ENST00000486868 PLEKHO1Q53GL0 409 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms