RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 CYP4X1Q8N118 509 aa9.02□□□□□ -0.97
PHTF1-211ENST00000486855 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
PHTF1-211ENST00000486855 CEP162Q5TB80 1403 aa9.02□□□□□ -0.97
PHTF1-211ENST00000486855 SETD1BQ9UPS6 1966 aaKnown RBP9.02□□□□□ -0.97
PHTF1-211ENST00000486855 PLXNC1O60486 1568 aa9.02□□□□□ -0.97
PHTF1-211ENST00000486855 MLH3Q9UHC1 1453 aa9.02□□□□□ -0.97
PHTF1-211ENST00000486855 STRCQ7RTU9 1775 aa9.01□□□□□ -0.97
PHTF1-211ENST00000486855 MROH2AA6NES4 1674 aa9.01□□□□□ -0.97
PHTF1-211ENST00000486855 C11orf95C9JLR9 678 aaPredicted RBP9.01□□□□□ -0.97
PHTF1-211ENST00000486855 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
PHTF1-211ENST00000486855 SMPD1P17405 629 aa9.01□□□□□ -0.97
PHTF1-211ENST00000486855 ATP6V1AP38606 617 aa9.01□□□□□ -0.97
PHTF1-211ENST00000486855 GCGRP47871 477 aa9.01□□□□□ -0.97
PHTF1-211ENST00000486855 TRAPPC8Q9Y2L5 1435 aa9.01□□□□□ -0.97
PHTF1-211ENST00000486855 ATP10AO60312 1499 aa9.01□□□□□ -0.97
PHTF1-211ENST00000486855 C9orf84Q5VXU9 1444 aa9□□□□□ -0.97
PHTF1-211ENST00000486855 DDX11L8A8MPP1 907 aa9□□□□□ -0.97
PHTF1-211ENST00000486855 WIPF1O43516 503 aa9□□□□□ -0.97
PHTF1-211ENST00000486855 CD2BP2O95400 341 aaKnown RBP9□□□□□ -0.97
PHTF1-211ENST00000486855 SALL2Q9Y467 1007 aaPredicted RBP9□□□□□ -0.97
PHTF1-211ENST00000486855 AGLP35573 1532 aa9□□□□□ -0.97
PHTF1-211ENST00000486855 GNPATO15228 680 aa8.99□□□□□ -0.97
PHTF1-211ENST00000486855 MSS51Q4VC12 460 aa8.99□□□□□ -0.97
PHTF1-211ENST00000486855 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
PHTF1-211ENST00000486855 CLTCQ00610 1675 aaKnown RBP8.98□□□□□ -0.97
PHTF1-211ENST00000486855 TESPA1A2RU30 521 aaPredicted RBP8.98□□□□□ -0.97
PHTF1-211ENST00000486855 SNRPBP14678 240 aaKnown RBP8.98□□□□□ -0.97
PHTF1-211ENST00000486855 ATP7AQ04656 1500 aa8.98□□□□□ -0.97
PHTF1-211ENST00000486855 WNT7AO00755 349 aa8.97□□□□□ -0.97
PHTF1-211ENST00000486855 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
PHTF1-211ENST00000486855 CDK11AQ9UQ88 783 aaPredicted RBP8.97□□□□□ -0.97
PHTF1-211ENST00000486855 EFCAB2Q5VUJ9 269 aa8.96□□□□□ -0.98
PHTF1-211ENST00000486855 ATP13A2Q9NQ11 1180 aa8.96□□□□□ -0.98
PHTF1-211ENST00000486855 CROCC2H7BZ55 1655 aa8.96□□□□□ -0.98
PHTF1-211ENST00000486855 ZNF142P52746 1687 aaPredicted RBP8.95□□□□□ -0.98
PHTF1-211ENST00000486855 J3QL48 77 aa8.95□□□□□ -0.98
PHTF1-211ENST00000486855 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
PHTF1-211ENST00000486855 AFAP1Q8N556 730 aa8.95□□□□□ -0.98
PHTF1-211ENST00000486855 MBD5Q9P267 1494 aa8.95□□□□□ -0.98
PHTF1-211ENST00000486855 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
PHTF1-211ENST00000486855 MMP16P51512 607 aa8.94□□□□□ -0.98
PHTF1-211ENST00000486855 TRIM32Q13049 653 aa8.94□□□□□ -0.98
PHTF1-211ENST00000486855 SNIP1Q8TAD8 396 aaKnown RBP8.94□□□□□ -0.98
PHTF1-211ENST00000486855 MRGPRX2Q96LB1 330 aa8.94□□□□□ -0.98
PHTF1-211ENST00000486855 STK17AQ9UEE5 414 aa8.94□□□□□ -0.98
PHTF1-211ENST00000486855 VPS8Q8N3P4 1428 aa8.93□□□□□ -0.98
PHTF1-211ENST00000486855 KIAA1107Q9UPP5 1409 aa8.93□□□□□ -0.98
PHTF1-211ENST00000486855 NCOA2Q15596 1464 aa8.93□□□□□ -0.98
PHTF1-211ENST00000486855 MAP3K1Q13233 1512 aa8.93□□□□□ -0.98
PHTF1-211ENST00000486855 ARHGEF5Q12774 1597 aa8.93□□□□□ -0.98
PHTF1-211ENST00000486855 MYO3AQ8NEV4 1616 aa8.92□□□□□ -0.98
PHTF1-211ENST00000486855 TRIM47Q96LD4 638 aa8.92□□□□□ -0.98
PHTF1-211ENST00000486855 MAST1Q9Y2H9 1570 aa8.91□□□□□ -0.98
PHTF1-211ENST00000486855 CAMSAP2Q08AD1 1489 aa8.91□□□□□ -0.98
PHTF1-211ENST00000486855 PLEKHH2Q8IVE3 1493 aa8.91□□□□□ -0.98
PHTF1-211ENST00000486855 HPS1Q92902 700 aa8.91□□□□□ -0.98
PHTF1-211ENST00000486855 LRRC9Q6ZRR7 1453 aa8.9□□□□□ -0.98
PHTF1-211ENST00000486855 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
PHTF1-211ENST00000486855 CFAP65Q6ZU64 1925 aaKnown RBP8.9□□□□□ -0.98
PHTF1-211ENST00000486855 ARID4BQ4LE39 1312 aaPredicted RBP8.9□□□□□ -0.98
PHTF1-211ENST00000486855 TERTO14746 1132 aaKnown RBP8.9□□□□□ -0.98
PHTF1-211ENST00000486855 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
PHTF1-211ENST00000486855 SKOR1P84550 965 aa8.9□□□□□ -0.98
PHTF1-211ENST00000486855 SULF1Q8IWU6 871 aa8.9□□□□□ -0.98
PHTF1-211ENST00000486855 RNF17Q9BXT8 1623 aaKnown RBP8.9□□□□□ -0.99
PHTF1-211ENST00000486855 CEP152O94986 1710 aa8.89□□□□□ -0.99
PHTF1-211ENST00000486855 LOC105371045A0A1W2PR82 267 aa8.89□□□□□ -0.99
PHTF1-211ENST00000486855 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
PHTF1-211ENST00000486855 MROH1Q8NDA8 1641 aa8.89□□□□□ -0.99
PHTF1-211ENST00000486855 POLR1AO95602 1720 aaPredicted RBP8.88□□□□□ -0.99
PHTF1-211ENST00000486855 CCNB3Q8WWL7 1395 aa8.88□□□□□ -0.99
PHTF1-211ENST00000486855 HLA-CQ95604 372 aa8.88□□□□□ -0.99
PHTF1-211ENST00000486855 A2MP01023 1474 aa8.88□□□□□ -0.99
PHTF1-211ENST00000486855 EIF2AK4Q9P2K8 1649 aaKnown RBP8.87□□□□□ -0.99
PHTF1-211ENST00000486855 ZNF644Q9H582 1327 aaPredicted RBP8.87□□□□□ -0.99
PHTF1-211ENST00000486855 CD46P15529 392 aa8.87□□□□□ -0.99
PHTF1-211ENST00000486855 INSM1Q01101 510 aaPredicted RBP8.87□□□□□ -0.99
PHTF1-211ENST00000486855 CCDC141Q6ZP82 1450 aa8.87□□□□□ -0.99
PHTF1-211ENST00000486855 ZC3H13Q5T200 1668 aaKnown RBP8.87□□□□□ -0.99
PHTF1-211ENST00000486855 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
PHTF1-211ENST00000486855 HNRNPMP52272 730 aaKnown RBP eCLIP8.86□□□□□ -0.99
PHTF1-211ENST00000486855 MLECQ14165 292 aa8.86□□□□□ -0.99
PHTF1-211ENST00000486855 DEPDC5O75140 1603 aa8.85□□□□□ -0.99
PHTF1-211ENST00000486855 DNMT1P26358 1616 aaKnown RBP8.85□□□□□ -0.99
PHTF1-211ENST00000486855 PTPN23Q9H3S7 1636 aa8.85□□□□□ -0.99
PHTF1-211ENST00000486855 RTEL1-TNFRSF6BF6WH68 1400 aa8.85□□□□□ -0.99
PHTF1-211ENST00000486855 CEBPAP49715 358 aaPredicted RBP8.84□□□□□ -0.99
PHTF1-211ENST00000486855 CFDP1Q9UEE9 299 aaPredicted RBP8.84□□□□□ -0.99
PHTF1-211ENST00000486855 ZNF777Q9ULD5 760 aaPredicted RBP8.84□□□□□ -0.99
PHTF1-211ENST00000486855 CEP170BQ9Y4F5 1589 aaPredicted RBP8.84□□□□□ -0.99
PHTF1-211ENST00000486855 FAM135AQ9P2D6 1515 aa8.84□□□□□ -0.99
PHTF1-211ENST00000486855 CAMSAP1Q5T5Y3 1602 aa8.83□□□□□ -1
PHTF1-211ENST00000486855 SPAG9O60271 1321 aaKnown RBP8.83□□□□□ -1
PHTF1-211ENST00000486855 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
PHTF1-211ENST00000486855 HSPA2P54652 639 aa8.83□□□□□ -1
PHTF1-211ENST00000486855 Q3C1V9 767 aa8.83□□□□□ -1
PHTF1-211ENST00000486855 RC3H1Q5TC82 1133 aaKnown RBP8.83□□□□□ -1
PHTF1-211ENST00000486855 USB1Q9BQ65 265 aaKnown RBP8.83□□□□□ -1
PHTF1-211ENST00000486855 SENP2Q9HC62 589 aa8.83□□□□□ -1
PHTF1-211ENST00000486855 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms