RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PHACTR3Q96KR7 559 aa26.25■■□□□ 1.79
HPS3-206ENST00000486530 CALD1Q05682 793 aaKnown RBP26.24■■□□□ 1.79
HPS3-206ENST00000486530 EXOSC9Q06265 439 aaKnown RBP26.24■■□□□ 1.79
HPS3-206ENST00000486530 MS4A1P11836 297 aa26.23■■□□□ 1.79
HPS3-206ENST00000486530 PHF8Q9UPP1 1060 aa26.23■■□□□ 1.79
HPS3-206ENST00000486530 LMTK3Q96Q04 1460 aa26.23■■□□□ 1.79
HPS3-206ENST00000486530 C14orf37Q86TY3 774 aa26.23■■□□□ 1.79
HPS3-206ENST00000486530 AAMPQ13685 434 aa26.22■■□□□ 1.79
HPS3-206ENST00000486530 LMOD3Q0VAK6 560 aa26.21■■□□□ 1.79
HPS3-206ENST00000486530 EIF4A2Q14240 407 aaKnown RBP26.21■■□□□ 1.79
HPS3-206ENST00000486530 PANK1Q8TE04 598 aa26.21■■□□□ 1.79
HPS3-206ENST00000486530 MARF1Q9Y4F3 1742 aaKnown RBP26.21■■□□□ 1.79
HPS3-206ENST00000486530 BCL2L13Q9BXK5 485 aa26.21■■□□□ 1.79
HPS3-206ENST00000486530 COG6Q9Y2V7 657 aa26.19■■□□□ 1.78
HPS3-206ENST00000486530 SBNO1A3KN83 1393 aa26.18■■□□□ 1.78
HPS3-206ENST00000486530 CLUAP1Q96AJ1 413 aa26.18■■□□□ 1.78
HPS3-206ENST00000486530 ESCO1Q5FWF5 840 aa26.17■■□□□ 1.78
HPS3-206ENST00000486530 FLT4P35916 1363 aa26.17■■□□□ 1.78
HPS3-206ENST00000486530 ZKSCAN2Q63HK3 967 aa26.17■■□□□ 1.78
HPS3-206ENST00000486530 C19orf44Q9H6X5 657 aa26.17■■□□□ 1.78
HPS3-206ENST00000486530 SMC4Q9NTJ3 1288 aa26.17■■□□□ 1.78
HPS3-206ENST00000486530 MAP3K19Q56UN5 1328 aa26.15■■□□□ 1.78
HPS3-206ENST00000486530 IFT57Q9NWB7 429 aa26.15■■□□□ 1.78
HPS3-206ENST00000486530 STRCP1A6NGW2 1772 aa26.15■■□□□ 1.78
HPS3-206ENST00000486530 ARHGEF10O15013 1369 aa26.14■■□□□ 1.78
HPS3-206ENST00000486530 GNAI1P63096 354 aa26.14■■□□□ 1.78
HPS3-206ENST00000486530 HSP90AB2PQ58FF8 381 aa26.14■■□□□ 1.78
HPS3-206ENST00000486530 ZNF428Q96B54 188 aa26.14■■□□□ 1.78
HPS3-206ENST00000486530 RLBP1P12271 317 aa26.13■■□□□ 1.77
HPS3-206ENST00000486530 SULT6B1Q6IMI4 303 aa26.13■■□□□ 1.77
HPS3-206ENST00000486530 SSH1Q8WYL5 1049 aa26.13■■□□□ 1.77
HPS3-206ENST00000486530 ORAI2Q96SN7 254 aa26.13■■□□□ 1.77
HPS3-206ENST00000486530 KIF24Q5T7B8 1368 aa26.12■■□□□ 1.77
HPS3-206ENST00000486530 NLRP6P59044 892 aa26.12■■□□□ 1.77
HPS3-206ENST00000486530 ALDH1L2Q3SY69 923 aa26.12■■□□□ 1.77
HPS3-206ENST00000486530 TMEM94Q12767 1356 aa26.12■■□□□ 1.77
HPS3-206ENST00000486530 SOX12O15370 315 aa26.11■■□□□ 1.77
HPS3-206ENST00000486530 NCOA3Q9Y6Q9 1424 aa26.11■■□□□ 1.77
HPS3-206ENST00000486530 ZNF853P0CG23 659 aa26.11■■□□□ 1.77
HPS3-206ENST00000486530 AEBP1Q8IUX7 1158 aa26.11■■□□□ 1.77
HPS3-206ENST00000486530 TNNQ9UQP3 1299 aa26.11■■□□□ 1.77
HPS3-206ENST00000486530 STRCQ7RTU9 1775 aa26.1■■□□□ 1.77
HPS3-206ENST00000486530 KIF16BQ96L93 1317 aa26.1■■□□□ 1.77
HPS3-206ENST00000486530 FTSJ3Q8IY81 847 aaKnown RBP26.1■■□□□ 1.77
HPS3-206ENST00000486530 DZIP1LQ8IYY4 767 aaKnown RBP26.1■■□□□ 1.77
HPS3-206ENST00000486530 ABTB2Q8N961 1025 aa26.1■■□□□ 1.77
HPS3-206ENST00000486530 LAS1LQ9Y4W2 734 aaKnown RBP26.1■■□□□ 1.77
HPS3-206ENST00000486530 PAK3O75914 559 aaPredicted RBP26.09■■□□□ 1.77
HPS3-206ENST00000486530 PSME1Q06323 249 aa26.09■■□□□ 1.77
HPS3-206ENST00000486530 MVPQ14764 893 aaKnown RBP26.09■■□□□ 1.77
HPS3-206ENST00000486530 THUMPD2Q9BTF0 503 aaKnown RBP26.09■■□□□ 1.77
HPS3-206ENST00000486530 PDE4AP27815 886 aa26.08■■□□□ 1.77
HPS3-206ENST00000486530 AMPHP49418 695 aa26.07■■□□□ 1.76
HPS3-206ENST00000486530 NUTM2GQ5VZR2 741 aa26.07■■□□□ 1.76
HPS3-206ENST00000486530 CFAP44Q96MT7 982 aa26.07■■□□□ 1.76
HPS3-206ENST00000486530 ATF7IPQ6VMQ6 1270 aa26.06■■□□□ 1.76
HPS3-206ENST00000486530 C1orf167Q5SNV9 1468 aa26.06■■□□□ 1.76
HPS3-206ENST00000486530 BRPF1P55201 1214 aaPredicted RBP26.06■■□□□ 1.76
HPS3-206ENST00000486530 BACH2Q9BYV9 841 aa26.06■■□□□ 1.76
HPS3-206ENST00000486530 TRIM27P14373 513 aa26.05■■□□□ 1.76
HPS3-206ENST00000486530 KDRP35968 1356 aa26.05■■□□□ 1.76
HPS3-206ENST00000486530 LTN1O94822 1766 aa26.04■■□□□ 1.76
HPS3-206ENST00000486530 IPO8O15397 1037 aaKnown RBP26.04■■□□□ 1.76
HPS3-206ENST00000486530 FOXO3O43524 673 aa26.04■■□□□ 1.76
HPS3-206ENST00000486530 SKAP1Q86WV1 359 aa26.04■■□□□ 1.76
HPS3-206ENST00000486530 MBIPQ9NS73 344 aa26.04■■□□□ 1.76
HPS3-206ENST00000486530 IGHDP01880 384 aa26.04■■□□□ 1.76
HPS3-206ENST00000486530 ATF3P18847 181 aa26.03■■□□□ 1.76
HPS3-206ENST00000486530 NOB1Q9ULX3 412 aaKnown RBP26.03■■□□□ 1.76
HPS3-206ENST00000486530 IGSF1Q8N6C5 1336 aa26.02■■□□□ 1.76
HPS3-206ENST00000486530 DCCP43146 1447 aa26.02■■□□□ 1.76
HPS3-206ENST00000486530 FAM83GA6ND36 823 aa26.02■■□□□ 1.76
HPS3-206ENST00000486530 RTL1A6NKG5 1358 aa26.02■■□□□ 1.76
HPS3-206ENST00000486530 MST1RQ04912 1400 aa26■■□□□ 1.75
HPS3-206ENST00000486530 VAMP4O75379 141 aa26■■□□□ 1.75
HPS3-206ENST00000486530 DDX19BQ9UMR2 479 aa26■■□□□ 1.75
HPS3-206ENST00000486530 MSH5O43196 834 aa26■■□□□ 1.75
HPS3-206ENST00000486530 ANP32AP39687 249 aaKnown RBP26■■□□□ 1.75
HPS3-206ENST00000486530 HOXC9P31274 260 aa25.99■■□□□ 1.75
HPS3-206ENST00000486530 PCDHB15Q9Y5E8 787 aa25.98■■□□□ 1.75
HPS3-206ENST00000486530 NFAT5O94916 1531 aa25.98■■□□□ 1.75
HPS3-206ENST00000486530 DCTN1Q14203 1278 aa25.98■■□□□ 1.75
HPS3-206ENST00000486530 XPCQ01831 940 aaPredicted RBP25.97■■□□□ 1.75
HPS3-206ENST00000486530 CADPS2Q86UW7 1296 aa25.97■■□□□ 1.75
HPS3-206ENST00000486530 EYA1Q99502 592 aa25.97■■□□□ 1.75
HPS3-206ENST00000486530 KIF1AQ12756 1690 aa25.97■■□□□ 1.75
HPS3-206ENST00000486530 PHRF1Q9P1Y6 1649 aaKnown RBP25.97■■□□□ 1.75
HPS3-206ENST00000486530 TWISTNBQ3B726 338 aaPredicted RBP25.96■■□□□ 1.75
HPS3-206ENST00000486530 KRT28Q7Z3Y7 464 aa25.96■■□□□ 1.75
HPS3-206ENST00000486530 ITPRIPQ8IWB1 547 aa25.96■■□□□ 1.75
HPS3-206ENST00000486530 TSPYL6Q8N831 410 aa25.96■■□□□ 1.75
HPS3-206ENST00000486530 ARHGAP45Q92619 1136 aa25.95■■□□□ 1.74
HPS3-206ENST00000486530 RWDD1Q9H446 243 aaPredicted RBP25.95■■□□□ 1.74
HPS3-206ENST00000486530 VIRMAQ69YN4 1812 aaKnown RBP25.94■■□□□ 1.74
HPS3-206ENST00000486530 MRPL50Q8N5N7 158 aaKnown RBP25.94■■□□□ 1.74
HPS3-206ENST00000486530 MSH6P52701 1360 aa25.93■■□□□ 1.74
HPS3-206ENST00000486530 ZNF335Q9H4Z2 1342 aaPredicted RBP25.93■■□□□ 1.74
HPS3-206ENST00000486530 RGS3P49796 1198 aa25.93■■□□□ 1.74
HPS3-206ENST00000486530 TMEM57Q8N5G2 664 aa25.93■■□□□ 1.74
HPS3-206ENST00000486530 GAS2L2Q8NHY3 880 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms