RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
TNXB-205ENST00000486148 BRPF1P55201 1214 aaPredicted RBP22.12■■□□□ 1.13
TNXB-205ENST00000486148 TXNDC2Q86VQ3 553 aa22.12■■□□□ 1.13
TNXB-205ENST00000486148 NUCB1Q02818 461 aa22.1■■□□□ 1.13
TNXB-205ENST00000486148 MRPL50Q8N5N7 158 aaKnown RBP22.1■■□□□ 1.13
TNXB-205ENST00000486148 ZNF428Q96B54 188 aa22.1■■□□□ 1.13
TNXB-205ENST00000486148 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
TNXB-205ENST00000486148 NUDT16Q96DE0 195 aaKnown RBP22.09■■□□□ 1.13
TNXB-205ENST00000486148 CPS1P31327 1500 aa22.08■■□□□ 1.13
TNXB-205ENST00000486148 LNPKQ9C0E8 428 aa22.08■■□□□ 1.13
TNXB-205ENST00000486148 ELL2O00472 640 aaPredicted RBP22.08■■□□□ 1.12
TNXB-205ENST00000486148 MBIPQ9NS73 344 aa22.08■■□□□ 1.12
TNXB-205ENST00000486148 ZNF853P0CG23 659 aa22.07■■□□□ 1.12
TNXB-205ENST00000486148 RRS1Q15050 365 aaKnown RBP22.07■■□□□ 1.12
TNXB-205ENST00000486148 SPRYD3Q8NCJ5 442 aa22.07■■□□□ 1.12
TNXB-205ENST00000486148 IFT57Q9NWB7 429 aa22.07■■□□□ 1.12
TNXB-205ENST00000486148 ZBTB7BO15156 539 aaPredicted RBP22.07■■□□□ 1.12
TNXB-205ENST00000486148 GNAI1P63096 354 aa22.07■■□□□ 1.12
TNXB-205ENST00000486148 CALD1Q05682 793 aaKnown RBP22.06■■□□□ 1.12
TNXB-205ENST00000486148 RRAGDQ9NQL2 400 aaPredicted RBP22.06■■□□□ 1.12
TNXB-205ENST00000486148 AATKQ6ZMQ8 1374 aa22.06■■□□□ 1.12
TNXB-205ENST00000486148 PTCH1Q13635 1447 aa22.06■■□□□ 1.12
TNXB-205ENST00000486148 CHD1LQ86WJ1 897 aa22.05■■□□□ 1.12
TNXB-205ENST00000486148 C1orf115Q9H7X2 142 aa22.05■■□□□ 1.12
TNXB-205ENST00000486148 COG3Q96JB2 828 aa22.05■■□□□ 1.12
TNXB-205ENST00000486148 ARHGAP45Q92619 1136 aa22.04■■□□□ 1.12
TNXB-205ENST00000486148 DLG5Q8TDM6 1919 aa22.04■■□□□ 1.12
TNXB-205ENST00000486148 PIK3R4Q99570 1358 aa22.04■■□□□ 1.12
TNXB-205ENST00000486148 MON2Q7Z3U7 1717 aa22.04■■□□□ 1.12
TNXB-205ENST00000486148 CCDC61Q9Y6R9 512 aa22.04■■□□□ 1.12
TNXB-205ENST00000486148 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.03■■□□□ 1.12
TNXB-205ENST00000486148 FAM83GA6ND36 823 aa22.03■■□□□ 1.12
TNXB-205ENST00000486148 C8orf58Q8NAV2 365 aa22.03■■□□□ 1.12
TNXB-205ENST00000486148 TWISTNBQ3B726 338 aaPredicted RBP22.02■■□□□ 1.11
TNXB-205ENST00000486148 CFAP44Q96MT7 982 aa22.01■■□□□ 1.11
TNXB-205ENST00000486148 ABCC4O15439 1325 aa22.01■■□□□ 1.11
TNXB-205ENST00000486148 PRR36Q9H6K5 1346 aa22.01■■□□□ 1.11
TNXB-205ENST00000486148 DCTN1Q14203 1278 aa22■■□□□ 1.11
TNXB-205ENST00000486148 C3P01024 1663 aa22■■□□□ 1.11
TNXB-205ENST00000486148 KNDC1Q76NI1 1749 aa22■■□□□ 1.11
TNXB-205ENST00000486148 ANKRD45Q5TZF3 282 aa22■■□□□ 1.11
TNXB-205ENST00000486148 SIRT2Q8IXJ6 389 aa22■■□□□ 1.11
TNXB-205ENST00000486148 AKAP12Q02952 1782 aa21.99■■□□□ 1.11
TNXB-205ENST00000486148 TECPR2O15040 1411 aa21.99■■□□□ 1.11
TNXB-205ENST00000486148 LMOD3Q0VAK6 560 aa21.98■■□□□ 1.11
TNXB-205ENST00000486148 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
TNXB-205ENST00000486148 SIRT1Q96EB6 747 aa21.97■■□□□ 1.11
TNXB-205ENST00000486148 ITSN1Q15811 1721 aa21.97■■□□□ 1.11
TNXB-205ENST00000486148 BMP2KLQ5H9B9 411 aa21.97■■□□□ 1.11
TNXB-205ENST00000486148 CHMP4BQ9H444 224 aaKnown RBP21.97■■□□□ 1.11
TNXB-205ENST00000486148 RBM25P49756 843 aaKnown RBP21.96■■□□□ 1.11
TNXB-205ENST00000486148 AEBP1Q8IUX7 1158 aa21.95■■□□□ 1.1
TNXB-205ENST00000486148 ZMYND15Q9H091 742 aa21.95■■□□□ 1.1
TNXB-205ENST00000486148 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
TNXB-205ENST00000486148 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
TNXB-205ENST00000486148 ROBO2Q9HCK4 1378 aa21.94■■□□□ 1.1
TNXB-205ENST00000486148 HSCBQ8IWL3 235 aa21.93■■□□□ 1.1
TNXB-205ENST00000486148 VSIG10Q8N0Z9 540 aa21.93■■□□□ 1.1
TNXB-205ENST00000486148 EIF4A2Q14240 407 aaKnown RBP21.93■■□□□ 1.1
TNXB-205ENST00000486148 GLIPR1L2Q4G1C9 344 aa21.93■■□□□ 1.1
TNXB-205ENST00000486148 CHMP5Q9NZZ3 219 aa21.93■■□□□ 1.1
TNXB-205ENST00000486148 API5Q9BZZ5 524 aaKnown RBP21.93■■□□□ 1.1
TNXB-205ENST00000486148 NRKQ7Z2Y5 1582 aa21.92■■□□□ 1.1
TNXB-205ENST00000486148 MCM4P33991 863 aa21.92■■□□□ 1.1
TNXB-205ENST00000486148 HDGFP51858 240 aaKnown RBP21.92■■□□□ 1.1
TNXB-205ENST00000486148 SULT6B1Q6IMI4 303 aa21.92■■□□□ 1.1
TNXB-205ENST00000486148 TNRQ92752 1358 aa21.91■■□□□ 1.1
TNXB-205ENST00000486148 TMEM2Q9UHN6 1383 aa21.9■■□□□ 1.1
TNXB-205ENST00000486148 KRT24Q2M2I5 525 aa21.9■■□□□ 1.1
TNXB-205ENST00000486148 TTC21BQ7Z4L5 1316 aa21.9■■□□□ 1.1
TNXB-205ENST00000486148 NUTM2FA1L443 756 aa21.89■■□□□ 1.1
TNXB-205ENST00000486148 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.09
TNXB-205ENST00000486148 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.88■■□□□ 1.09
TNXB-205ENST00000486148 TBC1D9Q6ZT07 1266 aa21.88■■□□□ 1.09
TNXB-205ENST00000486148 ACEP12821 1306 aa21.88■■□□□ 1.09
TNXB-205ENST00000486148 ADAMTS13Q76LX8 1427 aa21.88■■□□□ 1.09
TNXB-205ENST00000486148 SNX21Q969T3 373 aa21.88■■□□□ 1.09
TNXB-205ENST00000486148 KIF2CQ99661 725 aa21.88■■□□□ 1.09
TNXB-205ENST00000486148 UBR1Q8IWV7 1749 aa21.87■■□□□ 1.09
TNXB-205ENST00000486148 MCM10Q7L590 875 aa21.87■■□□□ 1.09
TNXB-205ENST00000486148 OVOS2A0A0J9YW53 1432 aa21.86■■□□□ 1.09
TNXB-205ENST00000486148 OVOS2Q6IE36 1432 aa21.86■■□□□ 1.09
TNXB-205ENST00000486148 DDIT3P35638 169 aa21.86■■□□□ 1.09
TNXB-205ENST00000486148 HSP90AB2PQ58FF8 381 aa21.85■■□□□ 1.09
TNXB-205ENST00000486148 PEAK1Q9H792 1746 aa21.85■■□□□ 1.09
TNXB-205ENST00000486148 KIF24Q5T7B8 1368 aa21.85■■□□□ 1.09
TNXB-205ENST00000486148 CHL1O00533 1208 aa21.84■■□□□ 1.09
TNXB-205ENST00000486148 RGS12O14924 1447 aa21.84■■□□□ 1.09
TNXB-205ENST00000486148 TOPAZ1Q8N9V7 1692 aa21.84■■□□□ 1.09
TNXB-205ENST00000486148 INTS3Q68E01 1043 aaKnown RBP21.84■■□□□ 1.09
TNXB-205ENST00000486148 USP6P35125 1406 aa21.83■■□□□ 1.08
TNXB-205ENST00000486148 PLEKHG3A1L390 1219 aa21.83■■□□□ 1.08
TNXB-205ENST00000486148 GSPT1P15170 499 aaKnown RBP21.83■■□□□ 1.08
TNXB-205ENST00000486148 LTKP29376 864 aa21.83■■□□□ 1.08
TNXB-205ENST00000486148 DCTPP1Q9H773 170 aa21.83■■□□□ 1.08
TNXB-205ENST00000486148 SOX12O15370 315 aa21.82■■□□□ 1.08
TNXB-205ENST00000486148 CD2BP2O95400 341 aaKnown RBP21.82■■□□□ 1.08
TNXB-205ENST00000486148 NAP1L5Q96NT1 182 aaPredicted RBP21.82■■□□□ 1.08
TNXB-205ENST00000486148 PLEKHM2Q8IWE5 1019 aa21.82■■□□□ 1.08
TNXB-205ENST00000486148 GZF1Q9H116 711 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms