RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ANKLE2Q86XL3 938 aa10.94□□□□□ -0.66
SMC4-217ENST00000485867 ZNF777Q9ULD5 760 aaPredicted RBP10.94□□□□□ -0.66
SMC4-217ENST00000485867 V9GY48 417 aaPredicted RBP10.94□□□□□ -0.66
SMC4-217ENST00000485867 GPATCH8Q9UKJ3 1502 aaKnown RBP10.94□□□□□ -0.66
SMC4-217ENST00000485867 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
SMC4-217ENST00000485867 ZC3H13Q5T200 1668 aaKnown RBP10.93□□□□□ -0.66
SMC4-217ENST00000485867 UGGT1Q9NYU2 1555 aa10.93□□□□□ -0.66
SMC4-217ENST00000485867 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
SMC4-217ENST00000485867 GGCXP38435 758 aa10.92□□□□□ -0.66
SMC4-217ENST00000485867 FBXO31Q5XUX0 539 aaPredicted RBP10.92□□□□□ -0.66
SMC4-217ENST00000485867 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
SMC4-217ENST00000485867 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
SMC4-217ENST00000485867 KDM5DQ9BY66 1539 aa10.92□□□□□ -0.66
SMC4-217ENST00000485867 NLRP1Q9C000 1473 aa10.92□□□□□ -0.66
SMC4-217ENST00000485867 TLL1O43897 1013 aa10.91□□□□□ -0.66
SMC4-217ENST00000485867 CASKIN1Q8WXD9 1431 aa10.91□□□□□ -0.66
SMC4-217ENST00000485867 GPIHBP1Q8IV16 184 aa10.9□□□□□ -0.66
SMC4-217ENST00000485867 THEMISQ8N1K5 641 aaPredicted RBP10.9□□□□□ -0.66
SMC4-217ENST00000485867 LAPTM4AQ15012 233 aa10.89□□□□□ -0.67
SMC4-217ENST00000485867 MIA2Q96PC5 1412 aa10.89□□□□□ -0.67
SMC4-217ENST00000485867 UBTFP17480 764 aaKnown RBP10.88□□□□□ -0.67
SMC4-217ENST00000485867 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
SMC4-217ENST00000485867 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
SMC4-217ENST00000485867 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
SMC4-217ENST00000485867 Q6ZNB5 142 aa10.87□□□□□ -0.67
SMC4-217ENST00000485867 NLRP7Q8WX94 980 aa10.87□□□□□ -0.67
SMC4-217ENST00000485867 DHX29Q7Z478 1369 aaKnown RBP10.87□□□□□ -0.67
SMC4-217ENST00000485867 FYCO1Q9BQS8 1478 aa10.87□□□□□ -0.67
SMC4-217ENST00000485867 FAM135BQ49AJ0 1406 aa10.86□□□□□ -0.67
SMC4-217ENST00000485867 GFRA3O60609 400 aa10.86□□□□□ -0.67
SMC4-217ENST00000485867 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
SMC4-217ENST00000485867 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
SMC4-217ENST00000485867 RTEL1-TNFRSF6BF6WH68 1400 aa10.85□□□□□ -0.67
SMC4-217ENST00000485867 UBR1Q8IWV7 1749 aa10.85□□□□□ -0.67
SMC4-217ENST00000485867 NR1I2O75469 434 aa10.85□□□□□ -0.67
SMC4-217ENST00000485867 CFDP1Q9UEE9 299 aaPredicted RBP10.85□□□□□ -0.67
SMC4-217ENST00000485867 MBD5Q9P267 1494 aa10.85□□□□□ -0.67
SMC4-217ENST00000485867 TIAM1Q13009 1591 aa10.83□□□□□ -0.68
SMC4-217ENST00000485867 CCNB3Q8WWL7 1395 aa10.83□□□□□ -0.68
SMC4-217ENST00000485867 KIF3BO15066 747 aa10.83□□□□□ -0.68
SMC4-217ENST00000485867 S1PR4O95977 384 aa10.83□□□□□ -0.68
SMC4-217ENST00000485867 ADH1BP00325 375 aa10.83□□□□□ -0.68
SMC4-217ENST00000485867 PUS10Q3MIT2 529 aaKnown RBP10.83□□□□□ -0.68
SMC4-217ENST00000485867 SCUBE3Q8IX30 993 aa10.83□□□□□ -0.68
SMC4-217ENST00000485867 EMID1Q96A84 441 aaPredicted RBP10.83□□□□□ -0.68
SMC4-217ENST00000485867 CFAP65Q6ZU64 1925 aaKnown RBP10.83□□□□□ -0.68
SMC4-217ENST00000485867 SCAF11Q99590 1463 aaKnown RBP10.82□□□□□ -0.68
SMC4-217ENST00000485867 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
SMC4-217ENST00000485867 NRG2O14511 850 aaPredicted RBP10.82□□□□□ -0.68
SMC4-217ENST00000485867 LCE2BO14633 110 aa10.82□□□□□ -0.68
SMC4-217ENST00000485867 RDH13Q8NBN7 331 aa10.82□□□□□ -0.68
SMC4-217ENST00000485867 WASHC2CQ9Y4E1 1318 aa10.82□□□□□ -0.68
SMC4-217ENST00000485867 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
SMC4-217ENST00000485867 ZNF644Q9H582 1327 aaPredicted RBP10.81□□□□□ -0.68
SMC4-217ENST00000485867 ERVK-7P63135 1459 aa10.81□□□□□ -0.68
SMC4-217ENST00000485867 PPEF1O14829 653 aaPredicted RBP10.8□□□□□ -0.68
SMC4-217ENST00000485867 PHLPP1O60346 1717 aa10.8□□□□□ -0.68
SMC4-217ENST00000485867 ARHGAP23Q9P227 1491 aa10.8□□□□□ -0.68
SMC4-217ENST00000485867 ABCC3O15438 1527 aa10.79□□□□□ -0.68
SMC4-217ENST00000485867 SLIT1O75093 1534 aa10.79□□□□□ -0.68
SMC4-217ENST00000485867 MAP3K1Q13233 1512 aa10.79□□□□□ -0.68
SMC4-217ENST00000485867 NCOA2Q15596 1464 aa10.79□□□□□ -0.68
SMC4-217ENST00000485867 LRRC9Q6ZRR7 1453 aa10.79□□□□□ -0.68
SMC4-217ENST00000485867 SLC19A1P41440 591 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 GCGRP47871 477 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 FUT2Q10981 343 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 MAP2K5Q13163 448 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 MORN1Q5T089 497 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 SULF1Q8IWU6 871 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 CCDC141Q6ZP82 1450 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 CEP152O94986 1710 aa10.78□□□□□ -0.68
SMC4-217ENST00000485867 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.69
SMC4-217ENST00000485867 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
SMC4-217ENST00000485867 PDZRN3Q9UPQ7 1066 aa10.77□□□□□ -0.69
SMC4-217ENST00000485867 TMEM94Q12767 1356 aa10.77□□□□□ -0.69
SMC4-217ENST00000485867 LTKP29376 864 aa10.76□□□□□ -0.69
SMC4-217ENST00000485867 SPSB2Q99619 263 aa10.76□□□□□ -0.69
SMC4-217ENST00000485867 MROH1Q8NDA8 1641 aa10.76□□□□□ -0.69
SMC4-217ENST00000485867 MTUS2Q5JR59 1369 aa10.76□□□□□ -0.69
SMC4-217ENST00000485867 JCADQ9P266 1359 aa10.76□□□□□ -0.69
SMC4-217ENST00000485867 ATP6V1AP38606 617 aa10.75□□□□□ -0.69
SMC4-217ENST00000485867 SPRYD7Q5W111 196 aa10.75□□□□□ -0.69
SMC4-217ENST00000485867 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
SMC4-217ENST00000485867 THAP11Q96EK4 314 aa10.75□□□□□ -0.69
SMC4-217ENST00000485867 LRP6O75581 1613 aa10.75□□□□□ -0.69
SMC4-217ENST00000485867 COL16A1Q07092 1604 aaPredicted RBP10.75□□□□□ -0.69
SMC4-217ENST00000485867 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
SMC4-217ENST00000485867 EIF2AK4Q9P2K8 1649 aaKnown RBP10.74□□□□□ -0.69
SMC4-217ENST00000485867 IRF6O14896 467 aa10.74□□□□□ -0.69
SMC4-217ENST00000485867 TRAF7Q6Q0C0 670 aa10.74□□□□□ -0.69
SMC4-217ENST00000485867 LIAT1Q6ZQX7 453 aa10.74□□□□□ -0.69
SMC4-217ENST00000485867 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
SMC4-217ENST00000485867 TXNDC2Q86VQ3 553 aa10.73□□□□□ -0.69
SMC4-217ENST00000485867 SLC27A5Q9Y2P5 690 aa10.73□□□□□ -0.69
SMC4-217ENST00000485867 NWD1Q149M9 1564 aa10.73□□□□□ -0.69
SMC4-217ENST00000485867 PLA2G2CQ5R387 149 aa10.72□□□□□ -0.69
SMC4-217ENST00000485867 TRIM52Q96A61 297 aa10.72□□□□□ -0.69
SMC4-217ENST00000485867 PRDM15P57071 1507 aaPredicted RBP10.72□□□□□ -0.69
SMC4-217ENST00000485867 ARHGEF5Q12774 1597 aa10.72□□□□□ -0.69
SMC4-217ENST00000485867 PIK3C2BO00750 1634 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms