RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 TRIM35Q9UPQ4 493 aa9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 NALCNQ8IZF0 1738 aa9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 LTKP29376 864 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 RIPK4P57078 832 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 CHADLQ6NUI6 762 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 NOP58Q9Y2X3 529 aaKnown RBP9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 PIK3R4Q99570 1358 aa9.49□□□□□ -0.89
SHROOM3-206ENST00000484236 VIRMAQ69YN4 1812 aaKnown RBP9.48□□□□□ -0.89
SHROOM3-206ENST00000484236 ZKSCAN2Q63HK3 967 aa9.48□□□□□ -0.89
SHROOM3-206ENST00000484236 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
SHROOM3-206ENST00000484236 IL13P35225 146 aa9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 NFE2L2Q16236 605 aa9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 ALDH1L2Q3SY69 923 aa9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 NME9Q86XW9 330 aa9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 PRR36Q9H6K5 1346 aa9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 PTPRUQ92729 1446 aa9.47□□□□□ -0.89
SHROOM3-206ENST00000484236 PRKAR2BP31323 418 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 EXOSC9Q06265 439 aaKnown RBP9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 PANK1Q8TE04 598 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 FRAT1Q92837 279 aaPredicted RBP9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 TTC21BQ7Z4L5 1316 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 TTC21AQ8NDW8 1320 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 KIF16BQ96L93 1317 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 USP31Q70CQ4 1352 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 OVOS2A0A0J9YW53 1432 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 USP6P35125 1406 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 OVOS2Q6IE36 1432 aa9.46□□□□□ -0.9
SHROOM3-206ENST00000484236 IPO8O15397 1037 aaKnown RBP9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 MVPQ14764 893 aaKnown RBP9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 DDRGK1Q96HY6 314 aa9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 ANKARQ7Z5J8 1434 aa9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 CEP170BQ9Y4F5 1589 aaPredicted RBP9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 USP54Q70EL1 1684 aa9.45□□□□□ -0.9
SHROOM3-206ENST00000484236 PPM1GO15355 546 aaPredicted RBP9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 GNAI1P63096 354 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 FTSJ3Q8IY81 847 aaKnown RBP9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 CHMP4BQ9H444 224 aaKnown RBP9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 RWDD1Q9H446 243 aaPredicted RBP9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 SMC4Q9NTJ3 1288 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 IFT57Q9NWB7 429 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 DDX19BQ9UMR2 479 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 AMOTL2Q9Y2J4 779 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 ACEP12821 1306 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 ZNF142P52746 1687 aaPredicted RBP9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 RGPD1P0DJD0 1748 aa9.44□□□□□ -0.9
SHROOM3-206ENST00000484236 IGHDP01880 384 aa9.43□□□□□ -0.9
SHROOM3-206ENST00000484236 CEBPAP49715 358 aaPredicted RBP9.43□□□□□ -0.9
SHROOM3-206ENST00000484236 ATF7IPQ6VMQ6 1270 aa9.43□□□□□ -0.9
SHROOM3-206ENST00000484236 TSR2Q969E8 191 aaKnown RBP9.43□□□□□ -0.9
SHROOM3-206ENST00000484236 FMN2Q9NZ56 1722 aa9.42□□□□□ -0.9
SHROOM3-206ENST00000484236 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
SHROOM3-206ENST00000484236 RLBP1P12271 317 aa9.42□□□□□ -0.9
SHROOM3-206ENST00000484236 SSH1Q8WYL5 1049 aa9.42□□□□□ -0.9
SHROOM3-206ENST00000484236 ARHGAP45Q92619 1136 aa9.42□□□□□ -0.9
SHROOM3-206ENST00000484236 SETD1BQ9UPS6 1966 aaKnown RBP9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 KIF24Q5T7B8 1368 aa9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 CHD2O14647 1828 aaKnown RBP9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 POTEMA6NI47 508 aa9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 C8orf34Q49A92 452 aa9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 PHACTR3Q96KR7 559 aa9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 ZRANB1Q9UGI0 708 aa9.41□□□□□ -0.9
SHROOM3-206ENST00000484236 RGPD8O14715 1765 aaPredicted RBP9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 PEAK1Q9H792 1746 aa9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 HMOX1P09601 288 aa9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 TRIM27P14373 513 aa9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 FBLN1P23142 703 aa9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 CFAP44Q96MT7 982 aa9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 BCL2L13Q9BXK5 485 aa9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.9
SHROOM3-206ENST00000484236 ARHGEF10O15013 1369 aa9.39□□□□□ -0.91
SHROOM3-206ENST00000484236 RGS3P49796 1198 aa9.39□□□□□ -0.91
SHROOM3-206ENST00000484236 EIF4A2Q14240 407 aaKnown RBP9.39□□□□□ -0.91
SHROOM3-206ENST00000484236 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
SHROOM3-206ENST00000484236 NOB1Q9ULX3 412 aaKnown RBP9.39□□□□□ -0.91
SHROOM3-206ENST00000484236 ADAMTSL3P82987 1691 aa9.39□□□□□ -0.91
SHROOM3-206ENST00000484236 SBNO1A3KN83 1393 aa9.38□□□□□ -0.91
SHROOM3-206ENST00000484236 FLT4P35916 1363 aa9.38□□□□□ -0.91
SHROOM3-206ENST00000484236 VAMP4O75379 141 aa9.38□□□□□ -0.91
SHROOM3-206ENST00000484236 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
SHROOM3-206ENST00000484236 DCBLD2Q96PD2 775 aa9.38□□□□□ -0.91
SHROOM3-206ENST00000484236 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
SHROOM3-206ENST00000484236 PIK3C2AO00443 1686 aa9.38□□□□□ -0.91
SHROOM3-206ENST00000484236 PAK3O75914 559 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms