RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 ADGRL3Q9HAR2 1447 aa12.54□□□□□ -0.4
UFD1-208ENST00000484101 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
UFD1-208ENST00000484101 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
UFD1-208ENST00000484101 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
UFD1-208ENST00000484101 EP400Q96L91 3159 aa12.53□□□□□ -0.4
UFD1-208ENST00000484101 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
UFD1-208ENST00000484101 AAMPQ13685 434 aa12.52□□□□□ -0.41
UFD1-208ENST00000484101 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
UFD1-208ENST00000484101 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
UFD1-208ENST00000484101 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
UFD1-208ENST00000484101 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
UFD1-208ENST00000484101 NME9Q86XW9 330 aa12.51□□□□□ -0.41
UFD1-208ENST00000484101 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
UFD1-208ENST00000484101 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
UFD1-208ENST00000484101 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
UFD1-208ENST00000484101 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
UFD1-208ENST00000484101 B4GALNT3Q6L9W6 998 aa12.5□□□□□ -0.41
UFD1-208ENST00000484101 YY1P25490 414 aa12.49□□□□□ -0.41
UFD1-208ENST00000484101 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
UFD1-208ENST00000484101 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
UFD1-208ENST00000484101 ZNF428Q96B54 188 aa12.48□□□□□ -0.41
UFD1-208ENST00000484101 RSPH6AQ9H0K4 717 aa12.48□□□□□ -0.41
UFD1-208ENST00000484101 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
UFD1-208ENST00000484101 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
UFD1-208ENST00000484101 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
UFD1-208ENST00000484101 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
UFD1-208ENST00000484101 MS4A1P11836 297 aa12.47□□□□□ -0.41
UFD1-208ENST00000484101 IL13P35225 146 aa12.47□□□□□ -0.41
UFD1-208ENST00000484101 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
UFD1-208ENST00000484101 MARF1Q9Y4F3 1742 aaKnown RBP12.47□□□□□ -0.41
UFD1-208ENST00000484101 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
UFD1-208ENST00000484101 RTL1A6NKG5 1358 aa12.46□□□□□ -0.41
UFD1-208ENST00000484101 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
UFD1-208ENST00000484101 FLT4P35916 1363 aa12.46□□□□□ -0.41
UFD1-208ENST00000484101 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
UFD1-208ENST00000484101 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.41
UFD1-208ENST00000484101 NFE2L2Q16236 605 aa12.45□□□□□ -0.42
UFD1-208ENST00000484101 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
UFD1-208ENST00000484101 EMILIN1Q9Y6C2 1016 aa12.45□□□□□ -0.42
UFD1-208ENST00000484101 DCCP43146 1447 aa12.45□□□□□ -0.42
UFD1-208ENST00000484101 PPM1GO15355 546 aaPredicted RBP12.44□□□□□ -0.42
UFD1-208ENST00000484101 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
UFD1-208ENST00000484101 RIPK4P57078 832 aa12.44□□□□□ -0.42
UFD1-208ENST00000484101 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
UFD1-208ENST00000484101 BRINP3Q76B58 766 aa12.44□□□□□ -0.42
UFD1-208ENST00000484101 RRP7AQ9Y3A4 280 aaKnown RBP12.44□□□□□ -0.42
UFD1-208ENST00000484101 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
UFD1-208ENST00000484101 CANXP27824 592 aaKnown RBP12.43□□□□□ -0.42
UFD1-208ENST00000484101 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
UFD1-208ENST00000484101 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
UFD1-208ENST00000484101 RARSP54136 660 aaKnown RBP12.42□□□□□ -0.42
UFD1-208ENST00000484101 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
UFD1-208ENST00000484101 DEFB132Q7Z7B7 95 aa12.42□□□□□ -0.42
UFD1-208ENST00000484101 CADPS2Q86UW7 1296 aa12.42□□□□□ -0.42
UFD1-208ENST00000484101 BCL9LQ86UU0 1499 aa12.41□□□□□ -0.42
UFD1-208ENST00000484101 LTN1O94822 1766 aa12.41□□□□□ -0.42
UFD1-208ENST00000484101 HAP1P54257 671 aaPredicted RBP12.41□□□□□ -0.42
UFD1-208ENST00000484101 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
UFD1-208ENST00000484101 TRPC5Q9UL62 973 aaPredicted RBP12.41□□□□□ -0.42
UFD1-208ENST00000484101 PHF8Q9UPP1 1060 aa12.41□□□□□ -0.42
UFD1-208ENST00000484101 ATRNO75882 1429 aa12.4□□□□□ -0.42
UFD1-208ENST00000484101 MST1RQ04912 1400 aa12.4□□□□□ -0.42
UFD1-208ENST00000484101 PSDA5PKW4 1024 aaPredicted RBP12.4□□□□□ -0.42
UFD1-208ENST00000484101 TCERG1O14776 1098 aaKnown RBP12.4□□□□□ -0.42
UFD1-208ENST00000484101 PLIN1O60240 522 aa12.4□□□□□ -0.42
UFD1-208ENST00000484101 GNAI1P63096 354 aa12.4□□□□□ -0.42
UFD1-208ENST00000484101 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
UFD1-208ENST00000484101 USP21Q9UK80 565 aa12.4□□□□□ -0.42
UFD1-208ENST00000484101 KDRP35968 1356 aa12.4□□□□□ -0.42
UFD1-208ENST00000484101 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
UFD1-208ENST00000484101 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
UFD1-208ENST00000484101 ATF3P18847 181 aa12.39□□□□□ -0.43
UFD1-208ENST00000484101 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
UFD1-208ENST00000484101 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
UFD1-208ENST00000484101 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
UFD1-208ENST00000484101 LRRC59Q96AG4 307 aaKnown RBP12.39□□□□□ -0.43
UFD1-208ENST00000484101 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
UFD1-208ENST00000484101 TRPM3Q9HCF6 1732 aaPredicted RBP12.39□□□□□ -0.43
UFD1-208ENST00000484101 NFAT5O94916 1531 aa12.38□□□□□ -0.43
UFD1-208ENST00000484101 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
UFD1-208ENST00000484101 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
UFD1-208ENST00000484101 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 SLIT3O75094 1523 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
UFD1-208ENST00000484101 BCAR3O75815 825 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 KCNH5Q8NCM2 988 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 ABCC6O95255 1503 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
UFD1-208ENST00000484101 HMOX1P09601 288 aa12.36□□□□□ -0.43
UFD1-208ENST00000484101 AMPHP49418 695 aa12.36□□□□□ -0.43
UFD1-208ENST00000484101 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
UFD1-208ENST00000484101 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
UFD1-208ENST00000484101 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
UFD1-208ENST00000484101 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
UFD1-208ENST00000484101 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
UFD1-208ENST00000484101 IGSF1Q8N6C5 1336 aa12.36□□□□□ -0.43
UFD1-208ENST00000484101 NLRP6P59044 892 aa12.35□□□□□ -0.43
UFD1-208ENST00000484101 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms