RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 NRAPQ86VF7 1730 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 USP19O94966 1318 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 SPATA31A1Q5TZJ5 1347 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 CENPJQ9HC77 1338 aaPredicted RBP7.36□□□□□ -1.23
COL17A1-206ENST00000483876 LMOD2Q6P5Q4 547 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 PROM2Q8N271 834 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 SIRT1Q96EB6 747 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 ADGRB1O14514 1584 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 MYO5BQ9ULV0 1848 aa7.36□□□□□ -1.23
COL17A1-206ENST00000483876 NPC1L1Q9UHC9 1359 aa7.35□□□□□ -1.23
COL17A1-206ENST00000483876 POLD1P28340 1107 aa7.35□□□□□ -1.23
COL17A1-206ENST00000483876 PANK3Q9H999 370 aa7.35□□□□□ -1.23
COL17A1-206ENST00000483876 TNS3Q68CZ2 1445 aa7.35□□□□□ -1.23
COL17A1-206ENST00000483876 NUTM2FA1L443 756 aa7.34□□□□□ -1.23
COL17A1-206ENST00000483876 POLR3GLQ9BT43 218 aa7.34□□□□□ -1.23
COL17A1-206ENST00000483876 MYBBP1AQ9BQG0 1328 aaKnown RBP7.33□□□□□ -1.24
COL17A1-206ENST00000483876 PSME1Q06323 249 aa7.33□□□□□ -1.24
COL17A1-206ENST00000483876 MRS2Q9HD23 443 aa7.33□□□□□ -1.24
COL17A1-206ENST00000483876 USP35Q9P2H5 1018 aa7.33□□□□□ -1.24
COL17A1-206ENST00000483876 TRAK1Q9UPV9 953 aa7.33□□□□□ -1.24
COL17A1-206ENST00000483876 KNSTRNQ9Y448 316 aa7.33□□□□□ -1.24
COL17A1-206ENST00000483876 NRXN3Q9Y4C0 1643 aa7.33□□□□□ -1.24
COL17A1-206ENST00000483876 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
COL17A1-206ENST00000483876 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
COL17A1-206ENST00000483876 PCNTO95613 3336 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 RGS19P49795 217 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 TMEM132EQ6IEE7 984 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 NLRP13Q86W25 1043 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
COL17A1-206ENST00000483876 PNISRQ8TF01 805 aaKnown RBP7.32□□□□□ -1.24
COL17A1-206ENST00000483876 ABHD8Q96I13 439 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 ARHGEF10O15013 1369 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 INSRP06213 1382 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 ABCC11Q96J66 1382 aa7.32□□□□□ -1.24
COL17A1-206ENST00000483876 EVC2Q86UK5 1308 aa7.31□□□□□ -1.24
COL17A1-206ENST00000483876 RGPD3A6NKT7 1758 aaPredicted RBP7.31□□□□□ -1.24
COL17A1-206ENST00000483876 RGPD4Q7Z3J3 1758 aa7.31□□□□□ -1.24
COL17A1-206ENST00000483876 FSTL1Q12841 308 aa7.31□□□□□ -1.24
COL17A1-206ENST00000483876 TXNRD1Q16881 649 aa7.31□□□□□ -1.24
COL17A1-206ENST00000483876 AMER1Q5JTC6 1135 aaPredicted RBP7.31□□□□□ -1.24
COL17A1-206ENST00000483876 BARGINQ6ZT62 677 aa7.31□□□□□ -1.24
COL17A1-206ENST00000483876 C16orf71Q8IYS4 520 aaPredicted RBP7.31□□□□□ -1.24
COL17A1-206ENST00000483876 TMC1Q8TDI8 760 aa7.31□□□□□ -1.24
COL17A1-206ENST00000483876 STRN4Q9NRL3 753 aa7.31□□□□□ -1.24
COL17A1-206ENST00000483876 TECPR2O15040 1411 aa7.3□□□□□ -1.24
COL17A1-206ENST00000483876 YTHDC2Q9H6S0 1430 aaKnown RBP7.3□□□□□ -1.24
COL17A1-206ENST00000483876 CCDC184Q52MB2 194 aa7.3□□□□□ -1.24
COL17A1-206ENST00000483876 PMFBP1Q8TBY8 1022 aa7.3□□□□□ -1.24
COL17A1-206ENST00000483876 PRDM10Q9NQV6 1147 aa7.3□□□□□ -1.24
COL17A1-206ENST00000483876 COL14A1Q05707 1796 aaKnown RBP7.3□□□□□ -1.24
COL17A1-206ENST00000483876 PTF1AQ7RTS3 328 aa7.29□□□□□ -1.24
COL17A1-206ENST00000483876 SBNO1A3KN83 1393 aa7.29□□□□□ -1.24
COL17A1-206ENST00000483876 CDC42BPGQ6DT37 1551 aa7.29□□□□□ -1.24
COL17A1-206ENST00000483876 OVOS2A0A0G2JMS6 1433 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 OVOS2A0A0J9YW53 1432 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 OVOS2Q6IE36 1432 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 ABCA3Q99758 1704 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 CCDC85CA6NKD9 419 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 SLC16A10Q8TF71 515 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 NMRK2Q9NPI5 230 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 PRDM11Q9NQV5 511 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 POGKQ9P215 609 aa7.28□□□□□ -1.24
COL17A1-206ENST00000483876 HNRNPUQ00839 825 aaKnown RBP eCLIP7.27□□□□□ -1.25
COL17A1-206ENST00000483876 FAM9BQ8IZU0 186 aa7.27□□□□□ -1.25
COL17A1-206ENST00000483876 PRAM1Q96QH2 718 aa7.27□□□□□ -1.25
COL17A1-206ENST00000483876 CARD14Q9BXL6 1004 aa7.27□□□□□ -1.25
COL17A1-206ENST00000483876 GTF3C3Q9Y5Q9 886 aa7.27□□□□□ -1.25
COL17A1-206ENST00000483876 ZBED9Q6R2W3 1325 aa7.27□□□□□ -1.25
COL17A1-206ENST00000483876 FOXN1O15353 648 aa7.26□□□□□ -1.25
COL17A1-206ENST00000483876 CC2D1BQ5T0F9 858 aaKnown RBP7.26□□□□□ -1.25
COL17A1-206ENST00000483876 TCP11L2Q8N4U5 519 aa7.26□□□□□ -1.25
COL17A1-206ENST00000483876 SLC12A5Q9H2X9 1139 aa7.26□□□□□ -1.25
COL17A1-206ENST00000483876 STK26Q9P289 416 aa7.26□□□□□ -1.25
COL17A1-206ENST00000483876 TULP4Q9NRJ4 1543 aa7.26□□□□□ -1.25
COL17A1-206ENST00000483876 NSD2O96028 1365 aa7.25□□□□□ -1.25
COL17A1-206ENST00000483876 ARHGEF28Q8N1W1 1705 aaKnown RBP7.25□□□□□ -1.25
COL17A1-206ENST00000483876 PPP2R1AP30153 589 aa7.25□□□□□ -1.25
COL17A1-206ENST00000483876 EVA1CP58658 441 aa7.25□□□□□ -1.25
COL17A1-206ENST00000483876 TERF2IPQ9NYB0 399 aa7.25□□□□□ -1.25
COL17A1-206ENST00000483876 PHF8Q9UPP1 1060 aa7.25□□□□□ -1.25
COL17A1-206ENST00000483876 KIF1AQ12756 1690 aa7.25□□□□□ -1.25
COL17A1-206ENST00000483876 CGNL1Q0VF96 1302 aa7.25□□□□□ -1.25
COL17A1-206ENST00000483876 ANKRD36BQ8N2N9 1353 aa7.24□□□□□ -1.25
COL17A1-206ENST00000483876 CTCFP49711 727 aaPredicted RBP7.24□□□□□ -1.25
COL17A1-206ENST00000483876 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
COL17A1-206ENST00000483876 CDK19Q9BWU1 502 aa7.24□□□□□ -1.25
COL17A1-206ENST00000483876 QRICH2Q9H0J4 1663 aa7.24□□□□□ -1.25
COL17A1-206ENST00000483876 WASLO00401 505 aaPredicted RBP7.23□□□□□ -1.25
COL17A1-206ENST00000483876 SRPK2P78362 688 aaKnown RBP7.23□□□□□ -1.25
COL17A1-206ENST00000483876 ZNF827Q17R98 1081 aa7.23□□□□□ -1.25
COL17A1-206ENST00000483876 NGEFQ8N5V2 710 aa7.23□□□□□ -1.25
COL17A1-206ENST00000483876 CABP2Q9NPB3 220 aa7.23□□□□□ -1.25
COL17A1-206ENST00000483876 THRAP3Q9Y2W1 955 aaKnown RBP7.23□□□□□ -1.25
COL17A1-206ENST00000483876 LARP1Q6PKG0 1096 aaKnown RBP7.22□□□□□ -1.25
COL17A1-206ENST00000483876 WAPLQ7Z5K2 1190 aa7.22□□□□□ -1.25
COL17A1-206ENST00000483876 SMC1BQ8NDV3 1235 aa7.22□□□□□ -1.25
COL17A1-206ENST00000483876 AIDAQ96BJ3 306 aa7.22□□□□□ -1.25
COL17A1-206ENST00000483876 CFAP44Q96MT7 982 aa7.22□□□□□ -1.25
COL17A1-206ENST00000483876 MINK1Q8N4C8 1332 aaPredicted RBP7.22□□□□□ -1.25
COL17A1-206ENST00000483876 POLR3AO14802 1390 aaPredicted RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms