RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DDX17Q92841 729 aaKnown RBP8.8□□□□□ -1
CSDE1-207ENST00000483407 L3MBTL3Q96JM7 780 aaPredicted RBP8.8□□□□□ -1
CSDE1-207ENST00000483407 PNPLA6Q8IY17 1366 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 SETD1AO15047 1707 aaKnown RBP8.8□□□□□ -1
CSDE1-207ENST00000483407 NEXMIFQ5QGS0 1516 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 NAIPQ13075 1403 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 PTCH1Q13635 1447 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 C1orf167Q5SNV9 1468 aa8.79□□□□□ -1
CSDE1-207ENST00000483407 GPIHBP1Q8IV16 184 aa8.79□□□□□ -1
CSDE1-207ENST00000483407 NGLY1Q96IV0 654 aa8.79□□□□□ -1
CSDE1-207ENST00000483407 QTRT2Q9H974 415 aaKnown RBP8.79□□□□□ -1
CSDE1-207ENST00000483407 ROBO2Q9HCK4 1378 aa8.78□□□□□ -1
CSDE1-207ENST00000483407 ADAMTS2O95450 1211 aa8.78□□□□□ -1
CSDE1-207ENST00000483407 NEUROD2Q15784 382 aa8.78□□□□□ -1
CSDE1-207ENST00000483407 CLTCL1P53675 1640 aa8.78□□□□□ -1
CSDE1-207ENST00000483407 SOS2Q07890 1332 aaPredicted RBP8.78□□□□□ -1
CSDE1-207ENST00000483407 MARVELD3Q96A59 401 aa8.77□□□□□ -1.01
CSDE1-207ENST00000483407 ORAI2Q96SN7 254 aa8.77□□□□□ -1.01
CSDE1-207ENST00000483407 HFM1A2PYH4 1435 aa8.77□□□□□ -1.01
CSDE1-207ENST00000483407 NHSL1Q5SYE7 1610 aa8.76□□□□□ -1.01
CSDE1-207ENST00000483407 USP21Q9UK80 565 aa8.76□□□□□ -1.01
CSDE1-207ENST00000483407 TIMELESSQ9UNS1 1208 aa8.76□□□□□ -1.01
CSDE1-207ENST00000483407 PRAG1Q86YV5 1406 aa8.76□□□□□ -1.01
CSDE1-207ENST00000483407 NPHP3Q7Z494 1330 aa8.76□□□□□ -1.01
CSDE1-207ENST00000483407 RGS12O14924 1447 aa8.75□□□□□ -1.01
CSDE1-207ENST00000483407 MAP3K9P80192 1104 aa8.75□□□□□ -1.01
CSDE1-207ENST00000483407 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
CSDE1-207ENST00000483407 TMEM92Q6UXU6 159 aa8.75□□□□□ -1.01
CSDE1-207ENST00000483407 ERICH6Q7L0X2 663 aa8.75□□□□□ -1.01
CSDE1-207ENST00000483407 AK7Q96M32 723 aa8.75□□□□□ -1.01
CSDE1-207ENST00000483407 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.75□□□□□ -1.01
CSDE1-207ENST00000483407 TRPC5Q9UL62 973 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-207ENST00000483407 NALCNQ8IZF0 1738 aa8.74□□□□□ -1.01
CSDE1-207ENST00000483407 LRPPRCP42704 1394 aaKnown RBP8.73□□□□□ -1.01
CSDE1-207ENST00000483407 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
CSDE1-207ENST00000483407 KIF1BO60333 1816 aa8.73□□□□□ -1.01
CSDE1-207ENST00000483407 CCDC144AA2RUR9 1427 aa8.73□□□□□ -1.01
CSDE1-207ENST00000483407 RGL3Q3MIN7 710 aa8.73□□□□□ -1.01
CSDE1-207ENST00000483407 FNBP4Q8N3X1 1017 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-207ENST00000483407 STK26Q9P289 416 aa8.73□□□□□ -1.01
CSDE1-207ENST00000483407 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
CSDE1-207ENST00000483407 FOXO3O43524 673 aa8.72□□□□□ -1.01
CSDE1-207ENST00000483407 PTGER2P43116 358 aa8.72□□□□□ -1.01
CSDE1-207ENST00000483407 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
CSDE1-207ENST00000483407 OXER1Q8TDS5 423 aa8.72□□□□□ -1.01
CSDE1-207ENST00000483407 ADGRF5Q8IZF2 1346 aa8.72□□□□□ -1.01
CSDE1-207ENST00000483407 GPR37O15354 613 aa8.71□□□□□ -1.02
CSDE1-207ENST00000483407 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.02
CSDE1-207ENST00000483407 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
CSDE1-207ENST00000483407 LAMC1P11047 1609 aa8.71□□□□□ -1.02
CSDE1-207ENST00000483407 CDC42BPGQ6DT37 1551 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 EMP3P54852 163 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 XPCQ01831 940 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-207ENST00000483407 WAPLQ7Z5K2 1190 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 MPHOSPH9Q99550 1183 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
CSDE1-207ENST00000483407 ABCC11Q96J66 1382 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 TECPR2O15040 1411 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 ATRNO75882 1429 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 MYOM2P54296 1465 aa8.7□□□□□ -1.02
CSDE1-207ENST00000483407 GRXCR2A6NFK2 248 aa8.69□□□□□ -1.02
CSDE1-207ENST00000483407 OSBPP22059 807 aa8.69□□□□□ -1.02
CSDE1-207ENST00000483407 TMEM132EQ6IEE7 984 aa8.69□□□□□ -1.02
CSDE1-207ENST00000483407 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
CSDE1-207ENST00000483407 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
CSDE1-207ENST00000483407 GJD4Q96KN9 370 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-207ENST00000483407 SPATA31E1Q6ZUB1 1445 aa8.68□□□□□ -1.02
CSDE1-207ENST00000483407 PXDNQ92626 1479 aa8.68□□□□□ -1.02
CSDE1-207ENST00000483407 TRIM66O15016 1216 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 TBC1D12O60347 775 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 PPLO60437 1756 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 SPATA31A3Q5VYP0 1347 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 BCL9LQ86UU0 1499 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 UNC5CLQ8IV45 518 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 COL22A1Q8NFW1 1626 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-207ENST00000483407 YTHDC2Q9H6S0 1430 aaKnown RBP8.67□□□□□ -1.02
CSDE1-207ENST00000483407 PLEKHH1Q9ULM0 1364 aa8.67□□□□□ -1.02
CSDE1-207ENST00000483407 DHX57Q6P158 1386 aaKnown RBP8.66□□□□□ -1.02
CSDE1-207ENST00000483407 PSME1Q06323 249 aa8.66□□□□□ -1.02
CSDE1-207ENST00000483407 KRT28Q7Z3Y7 464 aa8.66□□□□□ -1.02
CSDE1-207ENST00000483407 PTCD2Q8WV60 388 aaKnown RBP8.66□□□□□ -1.02
CSDE1-207ENST00000483407 HS3ST6Q96QI5 342 aa8.66□□□□□ -1.02
CSDE1-207ENST00000483407 C14orf93Q9H972 538 aaKnown RBP8.66□□□□□ -1.02
CSDE1-207ENST00000483407 DAXXQ9UER7 740 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-207ENST00000483407 MINK1Q8N4C8 1332 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-207ENST00000483407 EVI5O60447 810 aa8.64□□□□□ -1.03
CSDE1-207ENST00000483407 PDE4DQ08499 809 aa8.64□□□□□ -1.03
CSDE1-207ENST00000483407 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
CSDE1-207ENST00000483407 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-207ENST00000483407 POGKQ9P215 609 aa8.64□□□□□ -1.03
CSDE1-207ENST00000483407 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
CSDE1-207ENST00000483407 SLC34A2O95436 690 aa8.63□□□□□ -1.03
CSDE1-207ENST00000483407 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
CSDE1-207ENST00000483407 SAFB2Q14151 953 aaKnown RBP eCLIP8.63□□□□□ -1.03
CSDE1-207ENST00000483407 DDX12PQ92771 950 aa8.63□□□□□ -1.03
CSDE1-207ENST00000483407 PRAM1Q96QH2 718 aa8.63□□□□□ -1.03
CSDE1-207ENST00000483407 CCDC9Q9Y3X0 531 aaKnown RBP8.63□□□□□ -1.03
CSDE1-207ENST00000483407 SLIT2O94813 1529 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms