RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DHX57Q6P158 1386 aaKnown RBP11.13□□□□□ -0.63
SNX13-208ENST00000482558 ACIN1Q9UKV3 1341 aaKnown RBP11.12□□□□□ -0.63
SNX13-208ENST00000482558 SIAH2O43255 324 aa11.12□□□□□ -0.63
SNX13-208ENST00000482558 SETD5Q9C0A6 1442 aa11.11□□□□□ -0.63
SNX13-208ENST00000482558 UGGT2Q9NYU1 1516 aa11.11□□□□□ -0.63
SNX13-208ENST00000482558 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
SNX13-208ENST00000482558 MTUS2Q5JR59 1369 aa11.11□□□□□ -0.63
SNX13-208ENST00000482558 ERCC6Q03468 1493 aa11.11□□□□□ -0.63
SNX13-208ENST00000482558 EHBP1L1Q8N3D4 1523 aa11.1□□□□□ -0.63
SNX13-208ENST00000482558 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
SNX13-208ENST00000482558 DIEXFQ68CQ4 756 aaKnown RBP11.1□□□□□ -0.63
SNX13-208ENST00000482558 IRF7Q92985 503 aa11.1□□□□□ -0.63
SNX13-208ENST00000482558 HLA-CQ95604 372 aa11.1□□□□□ -0.63
SNX13-208ENST00000482558 PHLDB1Q86UU1 1377 aa11.1□□□□□ -0.63
SNX13-208ENST00000482558 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
SNX13-208ENST00000482558 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
SNX13-208ENST00000482558 EHBP1Q8NDI1 1231 aa11.09□□□□□ -0.63
SNX13-208ENST00000482558 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
SNX13-208ENST00000482558 TRIM46Q7Z4K8 759 aa11.08□□□□□ -0.64
SNX13-208ENST00000482558 NUDT12Q9BQG2 462 aa11.08□□□□□ -0.64
SNX13-208ENST00000482558 SUPT6HQ7KZ85 1726 aaKnown RBP11.07□□□□□ -0.64
SNX13-208ENST00000482558 CAPN5O15484 640 aaPredicted RBP11.07□□□□□ -0.64
SNX13-208ENST00000482558 GMPRP36959 345 aa11.07□□□□□ -0.64
SNX13-208ENST00000482558 MDM2Q00987 491 aaPredicted RBP11.07□□□□□ -0.64
SNX13-208ENST00000482558 RETREG3Q86VR2 466 aa11.07□□□□□ -0.64
SNX13-208ENST00000482558 ZSCAN1Q8NBB4 408 aa11.07□□□□□ -0.64
SNX13-208ENST00000482558 WASF2Q9Y6W5 498 aa11.07□□□□□ -0.64
SNX13-208ENST00000482558 FGD6Q6ZV73 1430 aa11.07□□□□□ -0.64
SNX13-208ENST00000482558 APBB1O00213 710 aa11.06□□□□□ -0.64
SNX13-208ENST00000482558 IL27Q8NEV9 243 aa11.06□□□□□ -0.64
SNX13-208ENST00000482558 RAB3GAP2Q9H2M9 1393 aa11.05□□□□□ -0.64
SNX13-208ENST00000482558 H3BM21 787 aa11.05□□□□□ -0.64
SNX13-208ENST00000482558 BMP1P13497 986 aa11.05□□□□□ -0.64
SNX13-208ENST00000482558 LORP23490 312 aaPredicted RBP11.05□□□□□ -0.64
SNX13-208ENST00000482558 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
SNX13-208ENST00000482558 GRIN2AQ12879 1464 aa11.05□□□□□ -0.64
SNX13-208ENST00000482558 FAM50AQ14320 339 aaKnown RBP11.04□□□□□ -0.64
SNX13-208ENST00000482558 PTCRAQ6ISU1 281 aaPredicted RBP11.04□□□□□ -0.64
SNX13-208ENST00000482558 EIF4G3O43432 1585 aaKnown RBP11.03□□□□□ -0.64
SNX13-208ENST00000482558 CLCN1P35523 988 aa11.03□□□□□ -0.64
SNX13-208ENST00000482558 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
SNX13-208ENST00000482558 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
SNX13-208ENST00000482558 SYNJ2O15056 1496 aa11.03□□□□□ -0.64
SNX13-208ENST00000482558 NCOA2Q15596 1464 aa11.03□□□□□ -0.64
SNX13-208ENST00000482558 ARHGEF11O15085 1522 aa11.03□□□□□ -0.64
SNX13-208ENST00000482558 MIA2Q96PC5 1412 aa11.02□□□□□ -0.64
SNX13-208ENST00000482558 ARID3CA6NKF2 412 aa11.02□□□□□ -0.65
SNX13-208ENST00000482558 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
SNX13-208ENST00000482558 FAM117AQ9C073 453 aa11.02□□□□□ -0.65
SNX13-208ENST00000482558 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
SNX13-208ENST00000482558 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
SNX13-208ENST00000482558 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
SNX13-208ENST00000482558 EPRSP07814 1512 aaKnown RBP11.01□□□□□ -0.65
SNX13-208ENST00000482558 SYMPKQ92797 1274 aaKnown RBP11.01□□□□□ -0.65
SNX13-208ENST00000482558 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
SNX13-208ENST00000482558 CCNYL3P0C7X3 344 aa11□□□□□ -0.65
SNX13-208ENST00000482558 SH3BP2P78314 561 aa11□□□□□ -0.65
SNX13-208ENST00000482558 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
SNX13-208ENST00000482558 MPNDQ8N594 471 aa11□□□□□ -0.65
SNX13-208ENST00000482558 HFM1A2PYH4 1435 aa11□□□□□ -0.65
SNX13-208ENST00000482558 CARMIL2Q6F5E8 1435 aa11□□□□□ -0.65
SNX13-208ENST00000482558 AKNAQ7Z591 1439 aa11□□□□□ -0.65
SNX13-208ENST00000482558 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
SNX13-208ENST00000482558 KIAA0556O60303 1618 aa10.99□□□□□ -0.65
SNX13-208ENST00000482558 CENPBP07199 599 aaPredicted RBP10.99□□□□□ -0.65
SNX13-208ENST00000482558 ITGAEP38570 1179 aa10.99□□□□□ -0.65
SNX13-208ENST00000482558 KCTD17Q8N5Z5 321 aa10.99□□□□□ -0.65
SNX13-208ENST00000482558 MS4A1P11836 297 aa10.98□□□□□ -0.65
SNX13-208ENST00000482558 PTPRNQ16849 979 aa10.98□□□□□ -0.65
SNX13-208ENST00000482558 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
SNX13-208ENST00000482558 LRRIQ1Q96JM4 1722 aa10.98□□□□□ -0.65
SNX13-208ENST00000482558 ZFP42Q96MM3 310 aa10.97□□□□□ -0.65
SNX13-208ENST00000482558 DISP1Q96F81 1524 aa10.97□□□□□ -0.65
SNX13-208ENST00000482558 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.65
SNX13-208ENST00000482558 NUP160Q12769 1436 aa10.96□□□□□ -0.65
SNX13-208ENST00000482558 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
SNX13-208ENST00000482558 PLEKHG3A1L390 1219 aa10.96□□□□□ -0.65
SNX13-208ENST00000482558 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.65
SNX13-208ENST00000482558 FDX1P10109 184 aa10.96□□□□□ -0.65
SNX13-208ENST00000482558 EVA1BQ9NVM1 165 aa10.96□□□□□ -0.65
SNX13-208ENST00000482558 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
SNX13-208ENST00000482558 MAPKBP1O60336 1514 aa10.94□□□□□ -0.66
SNX13-208ENST00000482558 UACAQ9BZF9 1416 aa10.94□□□□□ -0.66
SNX13-208ENST00000482558 C6orf229H3BNL8 230 aa10.94□□□□□ -0.66
SNX13-208ENST00000482558 VARSP26640 1264 aaKnown RBP10.94□□□□□ -0.66
SNX13-208ENST00000482558 VEGFBP49765 207 aa10.94□□□□□ -0.66
SNX13-208ENST00000482558 UNC93B1Q9H1C4 597 aa10.94□□□□□ -0.66
SNX13-208ENST00000482558 PCDHGC3Q9UN70 934 aa10.94□□□□□ -0.66
SNX13-208ENST00000482558 RAD21O60216 631 aa10.93□□□□□ -0.66
SNX13-208ENST00000482558 VSIG8P0DPA2 414 aa10.93□□□□□ -0.66
SNX13-208ENST00000482558 SCARF1Q14162 830 aa10.92□□□□□ -0.66
SNX13-208ENST00000482558 LOC100996750A0A140TA64 210 aa10.91□□□□□ -0.66
SNX13-208ENST00000482558 KCNH2Q12809 1159 aa10.91□□□□□ -0.66
SNX13-208ENST00000482558 NNTQ13423 1086 aa10.91□□□□□ -0.66
SNX13-208ENST00000482558 DESI1Q6ICB0 168 aa10.91□□□□□ -0.66
SNX13-208ENST00000482558 MRPL14Q6P1L8 145 aaKnown RBP10.91□□□□□ -0.66
SNX13-208ENST00000482558 KRTAP4-6Q9BYQ5 205 aa10.91□□□□□ -0.66
SNX13-208ENST00000482558 ROCK1Q13464 1354 aa10.9□□□□□ -0.66
SNX13-208ENST00000482558 CEP170Q5SW79 1584 aa10.9□□□□□ -0.66
SNX13-208ENST00000482558 MAGI3Q5TCQ9 1506 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms