RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
RXRA-202ENST00000481739 EXOC6Q8TAG9 804 aa20.5■□□□□ 0.87
RXRA-202ENST00000481739 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
RXRA-202ENST00000481739 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
RXRA-202ENST00000481739 LTBP4Q8N2S1 1624 aa20.48■□□□□ 0.87
RXRA-202ENST00000481739 TRPM3Q9HCF6 1732 aaPredicted RBP20.48■□□□□ 0.87
RXRA-202ENST00000481739 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
RXRA-202ENST00000481739 NEFMP07197 916 aa20.47■□□□□ 0.87
RXRA-202ENST00000481739 USP54Q70EL1 1684 aa20.47■□□□□ 0.87
RXRA-202ENST00000481739 IL16Q14005 1332 aa20.46■□□□□ 0.87
RXRA-202ENST00000481739 CT47B1P0C2W7 299 aaPredicted RBP20.46■□□□□ 0.87
RXRA-202ENST00000481739 NEUROD2Q15784 382 aa20.46■□□□□ 0.87
RXRA-202ENST00000481739 TMPOP42166 694 aaKnown RBP20.45■□□□□ 0.86
RXRA-202ENST00000481739 AMPHP49418 695 aa20.45■□□□□ 0.86
RXRA-202ENST00000481739 RRP7AQ9Y3A4 280 aaKnown RBP20.45■□□□□ 0.86
RXRA-202ENST00000481739 MAP3K19Q56UN5 1328 aa20.44■□□□□ 0.86
RXRA-202ENST00000481739 PLIN1O60240 522 aa20.44■□□□□ 0.86
RXRA-202ENST00000481739 KCNH5Q8NCM2 988 aa20.43■□□□□ 0.86
RXRA-202ENST00000481739 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
RXRA-202ENST00000481739 SBNO1A3KN83 1393 aa20.42■□□□□ 0.86
RXRA-202ENST00000481739 ZBTB7CA1YPR0 619 aa20.41■□□□□ 0.86
RXRA-202ENST00000481739 PEAK1Q9H792 1746 aa20.41■□□□□ 0.86
RXRA-202ENST00000481739 PXDNQ92626 1479 aa20.41■□□□□ 0.86
RXRA-202ENST00000481739 PDE3AQ14432 1141 aa20.41■□□□□ 0.86
RXRA-202ENST00000481739 HSP90AB2PQ58FF8 381 aa20.41■□□□□ 0.86
RXRA-202ENST00000481739 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
RXRA-202ENST00000481739 ALS2Q96Q42 1657 aa20.4■□□□□ 0.86
RXRA-202ENST00000481739 IL13P35225 146 aa20.4■□□□□ 0.86
RXRA-202ENST00000481739 FLT4P35916 1363 aa20.39■□□□□ 0.86
RXRA-202ENST00000481739 TNS3Q68CZ2 1445 aa20.39■□□□□ 0.85
RXRA-202ENST00000481739 GCP02774 474 aa20.39■□□□□ 0.85
RXRA-202ENST00000481739 RBM19Q9Y4C8 960 aaKnown RBP20.39■□□□□ 0.85
RXRA-202ENST00000481739 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
RXRA-202ENST00000481739 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
RXRA-202ENST00000481739 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
RXRA-202ENST00000481739 LTN1O94822 1766 aa20.37■□□□□ 0.85
RXRA-202ENST00000481739 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
RXRA-202ENST00000481739 NFAT5O94916 1531 aa20.37■□□□□ 0.85
RXRA-202ENST00000481739 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
RXRA-202ENST00000481739 RIPK4P57078 832 aa20.37■□□□□ 0.85
RXRA-202ENST00000481739 AAMPQ13685 434 aa20.37■□□□□ 0.85
RXRA-202ENST00000481739 USP19O94966 1318 aa20.36■□□□□ 0.85
RXRA-202ENST00000481739 SLIT3O75094 1523 aa20.36■□□□□ 0.85
RXRA-202ENST00000481739 HMOX1P09601 288 aa20.36■□□□□ 0.85
RXRA-202ENST00000481739 HOXC9P31274 260 aa20.36■□□□□ 0.85
RXRA-202ENST00000481739 ARHGEF10O15013 1369 aa20.35■□□□□ 0.85
RXRA-202ENST00000481739 RARSP54136 660 aaKnown RBP20.35■□□□□ 0.85
RXRA-202ENST00000481739 C20orf194Q5TEA3 1177 aa20.35■□□□□ 0.85
RXRA-202ENST00000481739 SOS2Q07890 1332 aaPredicted RBP20.35■□□□□ 0.85
RXRA-202ENST00000481739 KIF24Q5T7B8 1368 aa20.35■□□□□ 0.85
RXRA-202ENST00000481739 BCAR3O75815 825 aa20.34■□□□□ 0.85
RXRA-202ENST00000481739 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
RXRA-202ENST00000481739 NFE2L2Q16236 605 aa20.34■□□□□ 0.85
RXRA-202ENST00000481739 NHSL1Q5SYE7 1610 aa20.34■□□□□ 0.85
RXRA-202ENST00000481739 ROBO1Q9Y6N7 1651 aa20.33■□□□□ 0.85
RXRA-202ENST00000481739 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.85
RXRA-202ENST00000481739 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.84
RXRA-202ENST00000481739 MED1Q15648 1581 aaPredicted RBP20.33■□□□□ 0.84
RXRA-202ENST00000481739 LTV1Q96GA3 475 aaPredicted RBP20.32■□□□□ 0.84
RXRA-202ENST00000481739 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
RXRA-202ENST00000481739 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
RXRA-202ENST00000481739 ZC3H6P61129 1189 aaKnown RBP20.32■□□□□ 0.84
RXRA-202ENST00000481739 IP6K1Q92551 441 aa20.32■□□□□ 0.84
RXRA-202ENST00000481739 TOM1O60784 492 aa20.3■□□□□ 0.84
RXRA-202ENST00000481739 MS4A1P11836 297 aa20.3■□□□□ 0.84
RXRA-202ENST00000481739 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
RXRA-202ENST00000481739 ARHGEF25Q86VW2 580 aa20.3■□□□□ 0.84
RXRA-202ENST00000481739 ZNF428Q96B54 188 aa20.3■□□□□ 0.84
RXRA-202ENST00000481739 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
RXRA-202ENST00000481739 PHRF1Q9P1Y6 1649 aaKnown RBP20.29■□□□□ 0.84
RXRA-202ENST00000481739 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
RXRA-202ENST00000481739 HAP1P54257 671 aaPredicted RBP20.28■□□□□ 0.84
RXRA-202ENST00000481739 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
RXRA-202ENST00000481739 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.84
RXRA-202ENST00000481739 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
RXRA-202ENST00000481739 UBAP1LF5GYI3 381 aa20.25■□□□□ 0.83
RXRA-202ENST00000481739 EYA1Q99502 592 aa20.25■□□□□ 0.83
RXRA-202ENST00000481739 RGPD1P0DJD0 1748 aa20.25■□□□□ 0.83
RXRA-202ENST00000481739 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
RXRA-202ENST00000481739 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
RXRA-202ENST00000481739 CRYBG1Q9Y4K1 1723 aa20.24■□□□□ 0.83
RXRA-202ENST00000481739 GNAI1P63096 354 aa20.24■□□□□ 0.83
RXRA-202ENST00000481739 LRRC59Q96AG4 307 aaKnown RBP20.24■□□□□ 0.83
RXRA-202ENST00000481739 EXOSC9Q06265 439 aaKnown RBP20.23■□□□□ 0.83
RXRA-202ENST00000481739 TSR2Q969E8 191 aaKnown RBP20.23■□□□□ 0.83
RXRA-202ENST00000481739 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
RXRA-202ENST00000481739 ALDH1L2Q3SY69 923 aa20.23■□□□□ 0.83
RXRA-202ENST00000481739 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
RXRA-202ENST00000481739 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
RXRA-202ENST00000481739 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
RXRA-202ENST00000481739 AXIN2Q9Y2T1 843 aa20.22■□□□□ 0.83
RXRA-202ENST00000481739 CHRNA2Q15822 529 aa20.21■□□□□ 0.83
RXRA-202ENST00000481739 ANKRD24Q8TF21 1146 aa20.21■□□□□ 0.83
RXRA-202ENST00000481739 RGPD5Q99666 1765 aa20.21■□□□□ 0.83
RXRA-202ENST00000481739 KIF16BQ96L93 1317 aa20.21■□□□□ 0.83
RXRA-202ENST00000481739 KIAA0232Q92628 1395 aa20.21■□□□□ 0.83
RXRA-202ENST00000481739 CLUAP1Q96AJ1 413 aa20.2■□□□□ 0.82
RXRA-202ENST00000481739 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
RXRA-202ENST00000481739 BRPF1P55201 1214 aaPredicted RBP20.2■□□□□ 0.82
RXRA-202ENST00000481739 USHBP1Q8N6Y0 703 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms