RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
COPA-203ENST00000481040 STK32AQ8WU08 396 aa8.55□□□□□ -1.04
COPA-203ENST00000481040 NOVA2Q9UNW9 492 aaKnown RBP8.55□□□□□ -1.04
COPA-203ENST00000481040 PIK3CDO00329 1044 aa8.54□□□□□ -1.04
COPA-203ENST00000481040 MYT1Q01538 1121 aa8.54□□□□□ -1.04
COPA-203ENST00000481040 PHLDB3Q6NSJ2 640 aa8.54□□□□□ -1.04
COPA-203ENST00000481040 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
COPA-203ENST00000481040 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
COPA-203ENST00000481040 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
COPA-203ENST00000481040 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
COPA-203ENST00000481040 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
COPA-203ENST00000481040 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
COPA-203ENST00000481040 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
COPA-203ENST00000481040 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
COPA-203ENST00000481040 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
COPA-203ENST00000481040 ZBBXA8MT70 800 aa8.51□□□□□ -1.05
COPA-203ENST00000481040 SKIP12755 728 aa8.51□□□□□ -1.05
COPA-203ENST00000481040 ARID4AP29374 1257 aaPredicted RBP8.51□□□□□ -1.05
COPA-203ENST00000481040 FOXC1Q12948 553 aa8.51□□□□□ -1.05
COPA-203ENST00000481040 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
COPA-203ENST00000481040 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
COPA-203ENST00000481040 FAM187AA6NFU0 413 aa8.5□□□□□ -1.05
COPA-203ENST00000481040 FAM196BA6NMK8 535 aa8.5□□□□□ -1.05
COPA-203ENST00000481040 USP17L5A8MUK1 530 aa8.5□□□□□ -1.05
COPA-203ENST00000481040 POTECB2RU33 542 aa8.5□□□□□ -1.05
COPA-203ENST00000481040 ERCC3P19447 782 aa8.5□□□□□ -1.05
COPA-203ENST00000481040 SSFA2P28290 1259 aa8.5□□□□□ -1.05
COPA-203ENST00000481040 DGAT1O75907 488 aa8.49□□□□□ -1.05
COPA-203ENST00000481040 RPIAP49247 311 aa8.49□□□□□ -1.05
COPA-203ENST00000481040 PKDCCQ504Y2 493 aa8.49□□□□□ -1.05
COPA-203ENST00000481040 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
COPA-203ENST00000481040 DNAJC14Q6Y2X3 702 aaPredicted RBP8.49□□□□□ -1.05
COPA-203ENST00000481040 IGSF5Q9NSI5 407 aa8.49□□□□□ -1.05
COPA-203ENST00000481040 USP17L15C9J2P7 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L13C9JLJ4 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L12C9JPN9 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L11C9JVI0 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L21D6R901 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L18D6R9N7 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L22D6RA61 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L17D6RBQ6 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L19D6RCP7 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L20D6RJB6 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 ST8SIA5O15466 376 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 MMP16P51512 607 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP17L24Q0WX57 530 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 ZNF787Q6DD87 383 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
COPA-203ENST00000481040 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
COPA-203ENST00000481040 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
COPA-203ENST00000481040 FAM174AQ8TBP5 190 aa8.47□□□□□ -1.05
COPA-203ENST00000481040 SLAIN2Q9P270 581 aa8.47□□□□□ -1.05
COPA-203ENST00000481040 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
COPA-203ENST00000481040 FKBPLQ9UIM3 349 aa8.47□□□□□ -1.05
COPA-203ENST00000481040 SOWAHDA6NJG2 315 aa8.46□□□□□ -1.06
COPA-203ENST00000481040 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
COPA-203ENST00000481040 Q3C1V9 767 aa8.46□□□□□ -1.06
COPA-203ENST00000481040 LARP1Q6PKG0 1096 aaKnown RBP8.46□□□□□ -1.06
COPA-203ENST00000481040 CLP1Q92989 425 aaKnown RBP8.46□□□□□ -1.06
COPA-203ENST00000481040 TOR4AQ9NXH8 423 aa8.46□□□□□ -1.06
COPA-203ENST00000481040 FAM69CQ0P6D2 419 aa8.45□□□□□ -1.06
COPA-203ENST00000481040 PTK7Q13308 1070 aa8.45□□□□□ -1.06
COPA-203ENST00000481040 FAM200AQ8TCP9 573 aa8.45□□□□□ -1.06
COPA-203ENST00000481040 MRRFQ96E11 262 aaKnown RBP8.45□□□□□ -1.06
COPA-203ENST00000481040 USB1Q9BQ65 265 aaKnown RBP8.45□□□□□ -1.06
COPA-203ENST00000481040 KIAA1522Q9P206 1035 aaPredicted RBP8.45□□□□□ -1.06
COPA-203ENST00000481040 RASA1P20936 1047 aa8.44□□□□□ -1.06
COPA-203ENST00000481040 SIRT1Q96EB6 747 aa8.44□□□□□ -1.06
COPA-203ENST00000481040 CDCA7Q9BWT1 371 aaPredicted RBP8.44□□□□□ -1.06
COPA-203ENST00000481040 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
COPA-203ENST00000481040 DACH1Q9UI36 760 aa8.44□□□□□ -1.06
COPA-203ENST00000481040 ZC3H4Q9UPT8 1303 aaKnown RBP8.44□□□□□ -1.06
COPA-203ENST00000481040 ATP5J2-PTCD1G3V325 749 aa8.43□□□□□ -1.06
COPA-203ENST00000481040 SERPINB4P48594 390 aa8.43□□□□□ -1.06
COPA-203ENST00000481040 NOM1Q5C9Z4 860 aaKnown RBP8.43□□□□□ -1.06
COPA-203ENST00000481040 ZNF775Q96BV0 537 aaPredicted RBP8.43□□□□□ -1.06
COPA-203ENST00000481040 ZNF16P17020 682 aaPredicted RBP8.42□□□□□ -1.06
COPA-203ENST00000481040 ATP2B4P23634 1241 aa8.42□□□□□ -1.06
COPA-203ENST00000481040 TRIM32Q13049 653 aa8.42□□□□□ -1.06
COPA-203ENST00000481040 NCOA4Q13772 614 aa8.42□□□□□ -1.06
COPA-203ENST00000481040 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
COPA-203ENST00000481040 ANKMY2Q8IV38 441 aa8.42□□□□□ -1.06
COPA-203ENST00000481040 BCL2L13Q9BXK5 485 aa8.42□□□□□ -1.06
COPA-203ENST00000481040 LZTS3O60299 673 aaPredicted RBP8.41□□□□□ -1.06
COPA-203ENST00000481040 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
COPA-203ENST00000481040 F12P00748 615 aaPredicted RBP8.41□□□□□ -1.06
COPA-203ENST00000481040 MARSP56192 900 aaKnown RBP8.41□□□□□ -1.06
COPA-203ENST00000481040 CEP126Q9P2H0 1117 aa8.41□□□□□ -1.06
COPA-203ENST00000481040 SKOR1P84550 965 aa8.4□□□□□ -1.06
COPA-203ENST00000481040 RNF135Q8IUD6 432 aa8.4□□□□□ -1.06
COPA-203ENST00000481040 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
COPA-203ENST00000481040 AVPP01185 164 aa8.39□□□□□ -1.07
COPA-203ENST00000481040 SWI5Q1ZZU3 235 aa8.39□□□□□ -1.07
COPA-203ENST00000481040 PHTF2Q8N3S3 785 aa8.39□□□□□ -1.07
COPA-203ENST00000481040 PLPP7Q8NBV4 271 aa8.39□□□□□ -1.07
COPA-203ENST00000481040 MAP10Q9P2G4 905 aa8.39□□□□□ -1.07
COPA-203ENST00000481040 BIN2Q9UBW5 565 aaPredicted RBP8.39□□□□□ -1.07
COPA-203ENST00000481040 WNT7AO00755 349 aa8.38□□□□□ -1.07
COPA-203ENST00000481040 JUNDP17535 347 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms