RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 HSP90AB2PQ58FF8 381 aa36.23■■■■□ 3.39
TNFRSF25-213ENST00000480393 GOLGA6L2Q8N9W4 650 aaPredicted RBP36.23■■■■□ 3.39
TNFRSF25-213ENST00000480393 ATF3P18847 181 aa36.22■■■■□ 3.39
TNFRSF25-213ENST00000480393 DCCP43146 1447 aa36.21■■■■□ 3.39
TNFRSF25-213ENST00000480393 NFE2L2Q16236 605 aa36.21■■■■□ 3.39
TNFRSF25-213ENST00000480393 B4GALNT3Q6L9W6 998 aa36.2■■■■□ 3.39
TNFRSF25-213ENST00000480393 PHACTR3Q96KR7 559 aa36.19■■■■□ 3.38
TNFRSF25-213ENST00000480393 STRCQ7RTU9 1775 aa36.18■■■■□ 3.38
TNFRSF25-213ENST00000480393 KIF24Q5T7B8 1368 aa36.18■■■■□ 3.38
TNFRSF25-213ENST00000480393 IL16Q14005 1332 aa36.18■■■■□ 3.38
TNFRSF25-213ENST00000480393 FOXO3O43524 673 aa36.17■■■■□ 3.38
TNFRSF25-213ENST00000480393 RGPD1P0DJD0 1748 aa36.16■■■■□ 3.38
TNFRSF25-213ENST00000480393 EXOC6Q8TAG9 804 aa36.16■■■■□ 3.38
TNFRSF25-213ENST00000480393 SULT6B1Q6IMI4 303 aa36.15■■■■□ 3.38
TNFRSF25-213ENST00000480393 MST1RQ04912 1400 aa36.14■■■■□ 3.38
TNFRSF25-213ENST00000480393 ARHGEF10O15013 1369 aa36.14■■■■□ 3.38
TNFRSF25-213ENST00000480393 CCDC136Q96JN2 1154 aa36.14■■■■□ 3.38
TNFRSF25-213ENST00000480393 AEBP1Q8IUX7 1158 aa36.11■■■■□ 3.37
TNFRSF25-213ENST00000480393 FANCIQ9NVI1 1328 aa36.11■■■■□ 3.37
TNFRSF25-213ENST00000480393 XPCQ01831 940 aaPredicted RBP36.11■■■■□ 3.37
TNFRSF25-213ENST00000480393 LMOD3Q0VAK6 560 aa36.11■■■■□ 3.37
TNFRSF25-213ENST00000480393 MSH6P52701 1360 aa36.11■■■■□ 3.37
TNFRSF25-213ENST00000480393 RTL1A6NKG5 1358 aa36.1■■■■□ 3.37
TNFRSF25-213ENST00000480393 HOXC9P31274 260 aa36.09■■■■□ 3.37
TNFRSF25-213ENST00000480393 CADPS2Q86UW7 1296 aa36.09■■■■□ 3.37
TNFRSF25-213ENST00000480393 CALD1Q05682 793 aaKnown RBP36.08■■■■□ 3.37
TNFRSF25-213ENST00000480393 BCAR3O75815 825 aa36.08■■■■□ 3.37
TNFRSF25-213ENST00000480393 KRT28Q7Z3Y7 464 aa36.08■■■■□ 3.37
TNFRSF25-213ENST00000480393 TRPM3Q9HCF6 1732 aaPredicted RBP36.07■■■■□ 3.37
TNFRSF25-213ENST00000480393 NFAT5O94916 1531 aa36.07■■■■□ 3.36
TNFRSF25-213ENST00000480393 KCNH5Q8NCM2 988 aa36.07■■■■□ 3.36
TNFRSF25-213ENST00000480393 TSR2Q969E8 191 aaKnown RBP36.07■■■■□ 3.36
TNFRSF25-213ENST00000480393 CRBNQ96SW2 442 aa36.07■■■■□ 3.36
TNFRSF25-213ENST00000480393 LTN1O94822 1766 aa36.04■■■■□ 3.36
TNFRSF25-213ENST00000480393 CT47B1P0C2W7 299 aaPredicted RBP36.03■■■■□ 3.36
TNFRSF25-213ENST00000480393 C20orf194Q5TEA3 1177 aa36.03■■■■□ 3.36
TNFRSF25-213ENST00000480393 LMOD2Q6P5Q4 547 aa36.03■■■■□ 3.36
TNFRSF25-213ENST00000480393 CANXP27824 592 aaKnown RBP36.01■■■■□ 3.36
TNFRSF25-213ENST00000480393 RARSP54136 660 aaKnown RBP36.01■■■■□ 3.36
TNFRSF25-213ENST00000480393 IGSF1Q8N6C5 1336 aa36.01■■■■□ 3.36
TNFRSF25-213ENST00000480393 DLG5Q8TDM6 1919 aa36■■■■□ 3.35
TNFRSF25-213ENST00000480393 SLIT3O75094 1523 aa36■■■■□ 3.35
TNFRSF25-213ENST00000480393 EXOSC9Q06265 439 aaKnown RBP35.99■■■■□ 3.35
TNFRSF25-213ENST00000480393 EYA1Q99502 592 aa35.99■■■■□ 3.35
TNFRSF25-213ENST00000480393 XIRP1Q702N8 1843 aaKnown RBP35.99■■■■□ 3.35
TNFRSF25-213ENST00000480393 KDRP35968 1356 aa35.98■■■■□ 3.35
TNFRSF25-213ENST00000480393 LAS1LQ9Y4W2 734 aaKnown RBP35.97■■■■□ 3.35
TNFRSF25-213ENST00000480393 ZNF335Q9H4Z2 1342 aaPredicted RBP35.96■■■■□ 3.35
TNFRSF25-213ENST00000480393 IP6K1Q92551 441 aa35.96■■■■□ 3.35
TNFRSF25-213ENST00000480393 THUMPD2Q9BTF0 503 aaKnown RBP35.96■■■■□ 3.35
TNFRSF25-213ENST00000480393 ZBTB7CA1YPR0 619 aa35.95■■■■□ 3.35
TNFRSF25-213ENST00000480393 USP19O94966 1318 aa35.95■■■■□ 3.34
TNFRSF25-213ENST00000480393 GNAI1P63096 354 aa35.94■■■■□ 3.34
TNFRSF25-213ENST00000480393 LTV1Q96GA3 475 aaPredicted RBP35.94■■■■□ 3.34
TNFRSF25-213ENST00000480393 IFT57Q9NWB7 429 aa35.94■■■■□ 3.34
TNFRSF25-213ENST00000480393 PHRF1Q9P1Y6 1649 aaKnown RBP35.93■■■■□ 3.34
TNFRSF25-213ENST00000480393 NPHP3Q7Z494 1330 aa35.92■■■■□ 3.34
TNFRSF25-213ENST00000480393 ALS2Q96Q42 1657 aa35.92■■■■□ 3.34
TNFRSF25-213ENST00000480393 GCP02774 474 aa35.92■■■■□ 3.34
TNFRSF25-213ENST00000480393 PLEKHG5O94827 1062 aa35.91■■■■□ 3.34
TNFRSF25-213ENST00000480393 FRAT1Q92837 279 aaPredicted RBP35.91■■■■□ 3.34
TNFRSF25-213ENST00000480393 PDE3AQ14432 1141 aa35.89■■■■□ 3.34
TNFRSF25-213ENST00000480393 FAM83GA6ND36 823 aa35.88■■■■□ 3.34
TNFRSF25-213ENST00000480393 BCL2L13Q9BXK5 485 aa35.88■■■■□ 3.34
TNFRSF25-213ENST00000480393 DDX17Q92841 729 aaKnown RBP35.86■■■■□ 3.33
TNFRSF25-213ENST00000480393 ZNF853P0CG23 659 aa35.85■■■■□ 3.33
TNFRSF25-213ENST00000480393 DCTN1Q14203 1278 aa35.85■■■■□ 3.33
TNFRSF25-213ENST00000480393 ARHGEF25Q86VW2 580 aa35.85■■■■□ 3.33
TNFRSF25-213ENST00000480393 GAS2L2Q8NHY3 880 aa35.85■■■■□ 3.33
TNFRSF25-213ENST00000480393 CFAP44Q96MT7 982 aa35.85■■■■□ 3.33
TNFRSF25-213ENST00000480393 SMC4Q9NTJ3 1288 aa35.84■■■■□ 3.33
TNFRSF25-213ENST00000480393 MTHFSDQ2M296 383 aaKnown RBP35.83■■■■□ 3.33
TNFRSF25-213ENST00000480393 TNS3Q68CZ2 1445 aa35.82■■■■□ 3.33
TNFRSF25-213ENST00000480393 MBIPQ9NS73 344 aa35.82■■■■□ 3.32
TNFRSF25-213ENST00000480393 PXDNQ92626 1479 aa35.8■■■■□ 3.32
TNFRSF25-213ENST00000480393 RTF1Q92541 710 aaKnown RBP35.8■■■■□ 3.32
TNFRSF25-213ENST00000480393 TSHZ2Q9NRE2 1034 aa35.8■■■■□ 3.32
TNFRSF25-213ENST00000480393 MED1Q15648 1581 aaPredicted RBP35.79■■■■□ 3.32
TNFRSF25-213ENST00000480393 MCM10Q7L590 875 aa35.79■■■■□ 3.32
TNFRSF25-213ENST00000480393 BRINP3Q76B58 766 aa35.78■■■■□ 3.32
TNFRSF25-213ENST00000480393 USHBP1Q8N6Y0 703 aa35.77■■■■□ 3.32
TNFRSF25-213ENST00000480393 PANK1Q8TE04 598 aa35.77■■■■□ 3.32
TNFRSF25-213ENST00000480393 SSH1Q8WYL5 1049 aa35.77■■■■□ 3.32
TNFRSF25-213ENST00000480393 ZNF428Q96B54 188 aa35.77■■■■□ 3.32
TNFRSF25-213ENST00000480393 ZKSCAN2Q63HK3 967 aa35.76■■■■□ 3.31
TNFRSF25-213ENST00000480393 ALDH1L2Q3SY69 923 aa35.75■■■■□ 3.31
TNFRSF25-213ENST00000480393 SLAIN2Q9P270 581 aa35.74■■■■□ 3.31
TNFRSF25-213ENST00000480393 MS4A1P11836 297 aa35.73■■■■□ 3.31
TNFRSF25-213ENST00000480393 NBPF6Q5VWK0 638 aa35.73■■■■□ 3.31
TNFRSF25-213ENST00000480393 NBPF4Q96M43 638 aa35.73■■■■□ 3.31
TNFRSF25-213ENST00000480393 COG6Q9Y2V7 657 aa35.72■■■■□ 3.31
TNFRSF25-213ENST00000480393 SPATA31A3Q5VYP0 1347 aa35.72■■■■□ 3.31
TNFRSF25-213ENST00000480393 KIF16BQ96L93 1317 aa35.72■■■■□ 3.31
TNFRSF25-213ENST00000480393 HTATSF1O43719 755 aaKnown RBP35.71■■■■□ 3.31
TNFRSF25-213ENST00000480393 ANKRD24Q8TF21 1146 aa35.71■■■■□ 3.31
TNFRSF25-213ENST00000480393 ZC3H6P61129 1189 aaKnown RBP35.7■■■■□ 3.31
TNFRSF25-213ENST00000480393 CRB1P82279 1406 aa35.69■■■■□ 3.3
TNFRSF25-213ENST00000480393 FTSJ3Q8IY81 847 aaKnown RBP35.69■■■■□ 3.3
TNFRSF25-213ENST00000480393 LRRC59Q96AG4 307 aaKnown RBP35.69■■■■□ 3.3
TNFRSF25-213ENST00000480393 GNAT3A8MTJ3 354 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms