RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 SIRT1Q96EB6 747 aa21.79■■□□□ 1.08
PKD1-213ENST00000480227 CEBPAP49715 358 aaPredicted RBP21.78■■□□□ 1.08
PKD1-213ENST00000480227 AATKQ6ZMQ8 1374 aa21.78■■□□□ 1.08
PKD1-213ENST00000480227 NFKBIBQ15653 356 aa21.77■■□□□ 1.08
PKD1-213ENST00000480227 KIF16BQ96L93 1317 aa21.77■■□□□ 1.08
PKD1-213ENST00000480227 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.77■■□□□ 1.08
PKD1-213ENST00000480227 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
PKD1-213ENST00000480227 TSPYL6Q8N831 410 aa21.75■■□□□ 1.07
PKD1-213ENST00000480227 ELL2O00472 640 aaPredicted RBP21.75■■□□□ 1.07
PKD1-213ENST00000480227 ALDH1L2Q3SY69 923 aa21.74■■□□□ 1.07
PKD1-213ENST00000480227 SLC26A8Q96RN1 970 aa21.74■■□□□ 1.07
PKD1-213ENST00000480227 FAM83GA6ND36 823 aa21.74■■□□□ 1.07
PKD1-213ENST00000480227 IPO8O15397 1037 aaKnown RBP21.74■■□□□ 1.07
PKD1-213ENST00000480227 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
PKD1-213ENST00000480227 ZBTB40Q9NUA8 1239 aa21.73■■□□□ 1.07
PKD1-213ENST00000480227 MBIPQ9NS73 344 aa21.73■■□□□ 1.07
PKD1-213ENST00000480227 VAMP4O75379 141 aa21.72■■□□□ 1.07
PKD1-213ENST00000480227 HDAC1Q13547 482 aaPredicted RBP21.72■■□□□ 1.07
PKD1-213ENST00000480227 ACEP12821 1306 aa21.71■■□□□ 1.07
PKD1-213ENST00000480227 DCTN1Q14203 1278 aa21.71■■□□□ 1.07
PKD1-213ENST00000480227 GNAI1P63096 354 aa21.7■■□□□ 1.06
PKD1-213ENST00000480227 AEBP1Q8IUX7 1158 aa21.7■■□□□ 1.06
PKD1-213ENST00000480227 UPF2Q9HAU5 1272 aaKnown RBP21.7■■□□□ 1.06
PKD1-213ENST00000480227 IFT57Q9NWB7 429 aa21.7■■□□□ 1.06
PKD1-213ENST00000480227 TTC21BQ7Z4L5 1316 aa21.7■■□□□ 1.06
PKD1-213ENST00000480227 PLEKHG1Q9ULL1 1385 aa21.69■■□□□ 1.06
PKD1-213ENST00000480227 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
PKD1-213ENST00000480227 CALD1Q05682 793 aaKnown RBP21.69■■□□□ 1.06
PKD1-213ENST00000480227 PTPRUQ92729 1446 aa21.69■■□□□ 1.06
PKD1-213ENST00000480227 NRKQ7Z2Y5 1582 aa21.69■■□□□ 1.06
PKD1-213ENST00000480227 TOPAZ1Q8N9V7 1692 aa21.68■■□□□ 1.06
PKD1-213ENST00000480227 SOX12O15370 315 aa21.68■■□□□ 1.06
PKD1-213ENST00000480227 MRPL50Q8N5N7 158 aaKnown RBP21.68■■□□□ 1.06
PKD1-213ENST00000480227 EIF4A2Q14240 407 aaKnown RBP21.67■■□□□ 1.06
PKD1-213ENST00000480227 SMC5Q8IY18 1101 aa21.66■■□□□ 1.06
PKD1-213ENST00000480227 C8orf58Q8NAV2 365 aa21.66■■□□□ 1.06
PKD1-213ENST00000480227 ZNF428Q96B54 188 aa21.66■■□□□ 1.06
PKD1-213ENST00000480227 FRAT2O75474 233 aaPredicted RBP21.66■■□□□ 1.06
PKD1-213ENST00000480227 BRPF1P55201 1214 aaPredicted RBP21.66■■□□□ 1.06
PKD1-213ENST00000480227 SULT6B1Q6IMI4 303 aa21.66■■□□□ 1.06
PKD1-213ENST00000480227 CFAP44Q96MT7 982 aa21.66■■□□□ 1.06
PKD1-213ENST00000480227 TWISTNBQ3B726 338 aaPredicted RBP21.65■■□□□ 1.06
PKD1-213ENST00000480227 BECN1Q14457 450 aa21.65■■□□□ 1.06
PKD1-213ENST00000480227 TBC1D32Q96NH3 1257 aa21.65■■□□□ 1.06
PKD1-213ENST00000480227 C1orf115Q9H7X2 142 aa21.64■■□□□ 1.05
PKD1-213ENST00000480227 OVOS2A0A0J9YW53 1432 aa21.64■■□□□ 1.05
PKD1-213ENST00000480227 USP6P35125 1406 aa21.64■■□□□ 1.05
PKD1-213ENST00000480227 OVOS2Q6IE36 1432 aa21.64■■□□□ 1.05
PKD1-213ENST00000480227 PLEKHG3A1L390 1219 aa21.63■■□□□ 1.05
PKD1-213ENST00000480227 LMOD3Q0VAK6 560 aa21.63■■□□□ 1.05
PKD1-213ENST00000480227 HSP90AB2PQ58FF8 381 aa21.63■■□□□ 1.05
PKD1-213ENST00000480227 PEAK1Q9H792 1746 aa21.63■■□□□ 1.05
PKD1-213ENST00000480227 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
PKD1-213ENST00000480227 EID1Q9Y6B2 187 aa21.62■■□□□ 1.05
PKD1-213ENST00000480227 SLKQ9H2G2 1235 aaPredicted RBP21.62■■□□□ 1.05
PKD1-213ENST00000480227 RGPD8O14715 1765 aaPredicted RBP21.62■■□□□ 1.05
PKD1-213ENST00000480227 PTCH1Q13635 1447 aa21.62■■□□□ 1.05
PKD1-213ENST00000480227 ZBTB7BO15156 539 aaPredicted RBP21.61■■□□□ 1.05
PKD1-213ENST00000480227 LNPKQ9C0E8 428 aa21.6■■□□□ 1.05
PKD1-213ENST00000480227 NALCNQ8IZF0 1738 aa21.6■■□□□ 1.05
PKD1-213ENST00000480227 GSE1Q14687 1217 aa21.6■■□□□ 1.05
PKD1-213ENST00000480227 MFAP1P55081 439 aaKnown RBP21.59■■□□□ 1.05
PKD1-213ENST00000480227 ARHGAP45Q92619 1136 aa21.59■■□□□ 1.05
PKD1-213ENST00000480227 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
PKD1-213ENST00000480227 NUCB1Q02818 461 aa21.58■■□□□ 1.05
PKD1-213ENST00000480227 MCM10Q7L590 875 aa21.58■■□□□ 1.05
PKD1-213ENST00000480227 PIK3R4Q99570 1358 aa21.58■■□□□ 1.05
PKD1-213ENST00000480227 ABCC4O15439 1325 aa21.57■■□□□ 1.04
PKD1-213ENST00000480227 TBC1D2Q9BYX2 928 aa21.56■■□□□ 1.04
PKD1-213ENST00000480227 SSH2Q76I76 1423 aa21.56■■□□□ 1.04
PKD1-213ENST00000480227 SLIT1O75093 1534 aa21.55■■□□□ 1.04
PKD1-213ENST00000480227 CHD1LQ86WJ1 897 aa21.55■■□□□ 1.04
PKD1-213ENST00000480227 RGPD1P0DJD0 1748 aa21.55■■□□□ 1.04
PKD1-213ENST00000480227 USP31Q70CQ4 1352 aa21.54■■□□□ 1.04
PKD1-213ENST00000480227 FER1L4A9Z1Z3 1794 aa21.54■■□□□ 1.04
PKD1-213ENST00000480227 C22orf23Q9BZE7 217 aa21.54■■□□□ 1.04
PKD1-213ENST00000480227 ARHGAP23Q9P227 1491 aa21.54■■□□□ 1.04
PKD1-213ENST00000480227 SIRT2Q8IXJ6 389 aa21.54■■□□□ 1.04
PKD1-213ENST00000480227 MAP3K19Q56UN5 1328 aa21.54■■□□□ 1.04
PKD1-213ENST00000480227 TBX22Q9Y458 520 aa21.53■■□□□ 1.04
PKD1-213ENST00000480227 NGDNQ8NEJ9 315 aaKnown RBP21.53■■□□□ 1.04
PKD1-213ENST00000480227 RIMS1Q86UR5 1692 aaKnown RBP21.53■■□□□ 1.04
PKD1-213ENST00000480227 ANKRD45Q5TZF3 282 aa21.52■■□□□ 1.04
PKD1-213ENST00000480227 SPRYD3Q8NCJ5 442 aa21.52■■□□□ 1.04
PKD1-213ENST00000480227 DIP2AQ14689 1571 aa21.52■■□□□ 1.04
PKD1-213ENST00000480227 FMN2Q9NZ56 1722 aa21.52■■□□□ 1.04
PKD1-213ENST00000480227 FOXO3O43524 673 aa21.51■■□□□ 1.03
PKD1-213ENST00000480227 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
PKD1-213ENST00000480227 CHL1O00533 1208 aa21.5■■□□□ 1.03
PKD1-213ENST00000480227 TTC21AQ8NDW8 1320 aa21.49■■□□□ 1.03
PKD1-213ENST00000480227 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
PKD1-213ENST00000480227 ANTXR1Q9H6X2 564 aa21.49■■□□□ 1.03
PKD1-213ENST00000480227 MIS18AQ9NYP9 233 aa21.49■■□□□ 1.03
PKD1-213ENST00000480227 THEMISQ8N1K5 641 aaPredicted RBP21.48■■□□□ 1.03
PKD1-213ENST00000480227 GCC1Q96CN9 775 aa21.48■■□□□ 1.03
PKD1-213ENST00000480227 PIK3C2AO00443 1686 aa21.47■■□□□ 1.03
PKD1-213ENST00000480227 MTHFSDQ2M296 383 aaKnown RBP21.46■■□□□ 1.03
PKD1-213ENST00000480227 NUTM2GQ5VZR2 741 aa21.46■■□□□ 1.03
PKD1-213ENST00000480227 KCNA6P17658 529 aa21.46■■□□□ 1.03
PKD1-213ENST00000480227 IL27Q8NEV9 243 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms