RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 PCMTD1Q96MG8 357 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 FIBPO43427 364 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 ZSCAN25Q6NSZ9 544 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 INCENPQ9NQS7 918 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 ANO10Q9NW15 660 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 NAIPQ13075 1403 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 ANAPC15P60006 121 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 JAKMIP3Q5VZ66 844 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 UBE2Q2Q8WVN8 375 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 NBPF8Q3BBV2 869 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 RAB11FIP3O75154 756 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC183Q5T5S1 534 aa7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 SRRTQ9BXP5 876 aaKnown RBP7.27□□□□□ -1.25
PRPF4B-205ENST00000480058 UQCRHLA0A096LP55 91 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 UQCRHP07919 91 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 IMMTQ16891 758 aaKnown RBP7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 RAPGEF4Q8WZA2 1011 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 HMGB1P09429 215 aaKnown RBP7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 PAXBP1Q9Y5B6 917 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 CTR9Q6PD62 1173 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 PRKAR2BP31323 418 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 PTPN14Q15678 1187 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 SNX21Q969T3 373 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 UPF3BQ9BZI7 483 aaKnown RBP7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 EHBP1L1Q8N3D4 1523 aa7.26□□□□□ -1.25
PRPF4B-205ENST00000480058 CLSTN1O94985 981 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 BMS1Q14692 1282 aaKnown RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 PYM1Q9BRP8 204 aaKnown RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 PLEKHO1Q53GL0 409 aaPredicted RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 NFXL1Q6ZNB6 911 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 NACAP1Q9BZK3 213 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 MINK1Q8N4C8 1332 aaPredicted RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 NCOA1Q15788 1441 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 GTPBP4Q9BZE4 634 aaKnown RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 NOL7Q9UMY1 257 aaKnown RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 TBC1D32Q96NH3 1257 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 FMNL2Q96PY5 1086 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 MAGEC2Q9UBF1 373 aaPredicted RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 SLC3A2P08195 630 aaKnown RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 HDAC1Q13547 482 aaPredicted RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 SPATA32Q96LK8 384 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.25□□□□□ -1.252e-7■■□□□ 11.9
PRPF4B-205ENST00000480058 CFTRP13569 1480 aa7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 AXDND1Q5T1B0 1012 aaPredicted RBP7.25□□□□□ -1.25
PRPF4B-205ENST00000480058 EPB41L2O43491 1005 aaKnown RBP7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 SMC2O95347 1197 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 APPP05067 770 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 RBM25P49756 843 aaKnown RBP7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 PHAXQ9H814 394 aaKnown RBP7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 POLR3GO15318 223 aaPredicted RBP7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 KIF1BPQ96EK5 621 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 SERPINC1P01008 464 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 RARSP54136 660 aaKnown RBP7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 FAM193AP78312 1265 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 ARHGAP29Q52LW3 1261 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 ANKRD18AQ8IVF6 992 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 ERBINQ96RT1 1412 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 NFE2L2Q16236 605 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 FEZ1Q99689 392 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 CRACR2AQ9BSW2 395 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC196A0A1B0GTZ2 297 aa7.24□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC27Q2M243 656 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 MICALCLQ6ZW33 695 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 KIF20AO95235 890 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 ME1P48163 572 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 CFAP70Q5T0N1 1121 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 TBC1D2Q9BYX2 928 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 ZMYM3Q14202 1370 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 NKTRP30414 1462 aaKnown RBP7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 HDGFL1Q5TGJ6 251 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 BCL11BQ9C0K0 894 aaPredicted RBP7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 BMP2KQ9NSY1 1161 aaPredicted RBP7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 LIMCH1Q9UPQ0 1083 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 WIZO95785 1651 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 A6NNZ2 444 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 MLECQ14165 292 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 TUBB8Q3ZCM7 444 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 CT47A1Q5JQC4 288 aaPredicted RBP7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 CEP131Q9UPN4 1083 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 SYNJ2O15056 1496 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC171Q6TFL3 1326 aa7.23□□□□□ -1.25
PRPF4B-205ENST00000480058 SPAG1Q07617 926 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 FOXD4L6Q3SYB3 417 aaPredicted RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 FOXD4L3Q6VB84 417 aaPredicted RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 ZKSCAN5Q9Y2L8 839 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC141Q6ZP82 1450 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 GRIN2BQ13224 1484 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 RIC3Q7Z5B4 369 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 ZNF330Q9Y3S2 320 aaPredicted RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 SHTN1A0MZ66 631 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 NBPF1Q3BBV0 1214 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 BCAR3O75815 825 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 EIF2S2P20042 333 aaKnown RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 AMER1Q5JTC6 1135 aaPredicted RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 CCAR1Q8IX12 1150 aaKnown RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 PDILTQ8N807 584 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms