RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ARHGEF10O15013 1369 aa14.41□□□□□ -0.1
VTI1A-204ENST00000480057 SLIT3O75094 1523 aa14.41□□□□□ -0.1
VTI1A-204ENST00000480057 EIF4A2Q14240 407 aaKnown RBP14.4□□□□□ -0.1
VTI1A-204ENST00000480057 KCNH5Q8NCM2 988 aa14.4□□□□□ -0.1
VTI1A-204ENST00000480057 MYH16Q9H6N6 1097 aa14.4□□□□□ -0.1
VTI1A-204ENST00000480057 NFAT5O94916 1531 aa14.4□□□□□ -0.1
VTI1A-204ENST00000480057 PRKAR2BP31323 418 aa14.39□□□□□ -0.11
VTI1A-204ENST00000480057 ORAI2Q96SN7 254 aa14.39□□□□□ -0.11
VTI1A-204ENST00000480057 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
VTI1A-204ENST00000480057 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
VTI1A-204ENST00000480057 NFE2L2Q16236 605 aa14.38□□□□□ -0.11
VTI1A-204ENST00000480057 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
VTI1A-204ENST00000480057 RRP7AQ9Y3A4 280 aaKnown RBP14.38□□□□□ -0.11
VTI1A-204ENST00000480057 ALS2Q96Q42 1657 aa14.37□□□□□ -0.11
VTI1A-204ENST00000480057 CT47B1P0C2W7 299 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-204ENST00000480057 AMPHP49418 695 aa14.37□□□□□ -0.11
VTI1A-204ENST00000480057 CALD1Q05682 793 aaKnown RBP14.37□□□□□ -0.11
VTI1A-204ENST00000480057 LMOD3Q0VAK6 560 aa14.37□□□□□ -0.11
VTI1A-204ENST00000480057 TRIM35Q9UPQ4 493 aa14.37□□□□□ -0.11
VTI1A-204ENST00000480057 USP19O94966 1318 aa14.37□□□□□ -0.11
VTI1A-204ENST00000480057 RIPK4P57078 832 aa14.36□□□□□ -0.11
VTI1A-204ENST00000480057 NEUROD2Q15784 382 aa14.36□□□□□ -0.11
VTI1A-204ENST00000480057 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
VTI1A-204ENST00000480057 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
VTI1A-204ENST00000480057 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-204ENST00000480057 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-204ENST00000480057 KDRP35968 1356 aa14.35□□□□□ -0.11
VTI1A-204ENST00000480057 LTN1O94822 1766 aa14.35□□□□□ -0.11
VTI1A-204ENST00000480057 FOXO3O43524 673 aa14.35□□□□□ -0.11
VTI1A-204ENST00000480057 NPHP3Q7Z494 1330 aa14.35□□□□□ -0.11
VTI1A-204ENST00000480057 IGSF1Q8N6C5 1336 aa14.35□□□□□ -0.11
VTI1A-204ENST00000480057 HMOX1P09601 288 aa14.34□□□□□ -0.11
VTI1A-204ENST00000480057 HOXC9P31274 260 aa14.34□□□□□ -0.11
VTI1A-204ENST00000480057 IP6K1Q92551 441 aa14.33□□□□□ -0.12
VTI1A-204ENST00000480057 IRX6P78412 446 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-204ENST00000480057 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
VTI1A-204ENST00000480057 PHACTR3Q96KR7 559 aa14.32□□□□□ -0.12
VTI1A-204ENST00000480057 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-204ENST00000480057 PXDNQ92626 1479 aa14.31□□□□□ -0.12
VTI1A-204ENST00000480057 ABCC6O95255 1503 aa14.31□□□□□ -0.12
VTI1A-204ENST00000480057 MED1Q15648 1581 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-204ENST00000480057 SOX12O15370 315 aa14.31□□□□□ -0.12
VTI1A-204ENST00000480057 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
VTI1A-204ENST00000480057 TNS3Q68CZ2 1445 aa14.31□□□□□ -0.12
VTI1A-204ENST00000480057 DLG5Q8TDM6 1919 aa14.31□□□□□ -0.12
VTI1A-204ENST00000480057 GCP02774 474 aa14.3□□□□□ -0.12
VTI1A-204ENST00000480057 ARHGEF25Q86VW2 580 aa14.29□□□□□ -0.12
VTI1A-204ENST00000480057 ZNF428Q96B54 188 aa14.29□□□□□ -0.12
VTI1A-204ENST00000480057 EYA1Q99502 592 aa14.29□□□□□ -0.12
VTI1A-204ENST00000480057 IFT57Q9NWB7 429 aa14.29□□□□□ -0.12
VTI1A-204ENST00000480057 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
VTI1A-204ENST00000480057 NCAPD2Q15021 1401 aa14.28□□□□□ -0.12
VTI1A-204ENST00000480057 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
VTI1A-204ENST00000480057 CRYBG1Q9Y4K1 1723 aa14.27□□□□□ -0.12
VTI1A-204ENST00000480057 CAMTA1Q9Y6Y1 1673 aa14.27□□□□□ -0.12
VTI1A-204ENST00000480057 HTATSF1O43719 755 aaKnown RBP14.27□□□□□ -0.13
VTI1A-204ENST00000480057 GNAI1P63096 354 aa14.27□□□□□ -0.13
VTI1A-204ENST00000480057 GAS2L2Q8NHY3 880 aa14.27□□□□□ -0.13
VTI1A-204ENST00000480057 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
VTI1A-204ENST00000480057 ZNF853P0CG23 659 aa14.26□□□□□ -0.13
VTI1A-204ENST00000480057 XPCQ01831 940 aaPredicted RBP14.26□□□□□ -0.13
VTI1A-204ENST00000480057 BRINP3Q76B58 766 aa14.26□□□□□ -0.13
VTI1A-204ENST00000480057 SLAIN2Q9P270 581 aa14.26□□□□□ -0.13
VTI1A-204ENST00000480057 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
VTI1A-204ENST00000480057 SOS2Q07890 1332 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-204ENST00000480057 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
VTI1A-204ENST00000480057 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
VTI1A-204ENST00000480057 NHSL1Q5SYE7 1610 aa14.24□□□□□ -0.13
VTI1A-204ENST00000480057 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
VTI1A-204ENST00000480057 CPDO75976 1380 aa14.23□□□□□ -0.13
VTI1A-204ENST00000480057 FAM208AQ9UK61 1670 aaKnown RBP14.23□□□□□ -0.13
VTI1A-204ENST00000480057 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
VTI1A-204ENST00000480057 AAMPQ13685 434 aa14.22□□□□□ -0.13
VTI1A-204ENST00000480057 ALDH1L2Q3SY69 923 aa14.22□□□□□ -0.13
VTI1A-204ENST00000480057 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
VTI1A-204ENST00000480057 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
VTI1A-204ENST00000480057 LRRC37A3O60309 1634 aa14.22□□□□□ -0.13
VTI1A-204ENST00000480057 COL18A1P39060 1754 aa14.22□□□□□ -0.13
VTI1A-204ENST00000480057 PLIN1O60240 522 aa14.21□□□□□ -0.13
VTI1A-204ENST00000480057 BCAR3O75815 825 aa14.21□□□□□ -0.13
VTI1A-204ENST00000480057 MS4A1P11836 297 aa14.21□□□□□ -0.13
VTI1A-204ENST00000480057 HAP1P54257 671 aaPredicted RBP14.21□□□□□ -0.13
VTI1A-204ENST00000480057 BRPF1P55201 1214 aaPredicted RBP14.21□□□□□ -0.13
VTI1A-204ENST00000480057 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
VTI1A-204ENST00000480057 TSR2Q969E8 191 aaKnown RBP14.21□□□□□ -0.13
VTI1A-204ENST00000480057 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
VTI1A-204ENST00000480057 LTBP4Q8N2S1 1624 aa14.2□□□□□ -0.14
VTI1A-204ENST00000480057 MTHFSDQ2M296 383 aaKnown RBP14.2□□□□□ -0.14
VTI1A-204ENST00000480057 CRBNQ96SW2 442 aa14.2□□□□□ -0.14
VTI1A-204ENST00000480057 CRB1P82279 1406 aa14.2□□□□□ -0.14
VTI1A-204ENST00000480057 RTF1Q92541 710 aaKnown RBP14.19□□□□□ -0.14
VTI1A-204ENST00000480057 BABAM1Q9NWV8 329 aa14.19□□□□□ -0.14
VTI1A-204ENST00000480057 KIAA0232Q92628 1395 aa14.19□□□□□ -0.14
VTI1A-204ENST00000480057 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
VTI1A-204ENST00000480057 CHL1O00533 1208 aa14.18□□□□□ -0.14
VTI1A-204ENST00000480057 NBPF6Q5VWK0 638 aa14.18□□□□□ -0.14
VTI1A-204ENST00000480057 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
VTI1A-204ENST00000480057 ANKRD24Q8TF21 1146 aa14.18□□□□□ -0.14
VTI1A-204ENST00000480057 LTV1Q96GA3 475 aaPredicted RBP14.18□□□□□ -0.14
VTI1A-204ENST00000480057 NBPF4Q96M43 638 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms