RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 IFT172Q9UG01 1749 aa25.56■■□□□ 1.68
COL13A1-208ENST00000479733 NEURL4Q96JN8 1562 aa25.56■■□□□ 1.68
COL13A1-208ENST00000479733 SETBP1Q9Y6X0 1596 aa25.56■■□□□ 1.68
COL13A1-208ENST00000479733 TULP4Q9NRJ4 1543 aa25.56■■□□□ 1.68
COL13A1-208ENST00000479733 MROH1Q8NDA8 1641 aa25.56■■□□□ 1.68
COL13A1-208ENST00000479733 CFAP74Q9C0B2 1584 aa25.55■■□□□ 1.68
COL13A1-208ENST00000479733 RABEP1Q15276 862 aa25.55■■□□□ 1.68
COL13A1-208ENST00000479733 CLEC17AQ6ZS10 378 aa25.55■■□□□ 1.68
COL13A1-208ENST00000479733 PLEKHM2Q8IWE5 1019 aa25.55■■□□□ 1.68
COL13A1-208ENST00000479733 ZNF445P59923 1031 aa25.54■■□□□ 1.68
COL13A1-208ENST00000479733 NUCB2P80303 420 aa25.54■■□□□ 1.68
COL13A1-208ENST00000479733 ZBTB7CA1YPR0 619 aa25.54■■□□□ 1.68
COL13A1-208ENST00000479733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.54■■□□□ 1.68
COL13A1-208ENST00000479733 OTUD7AQ8TE49 926 aaPredicted RBP25.54■■□□□ 1.68
COL13A1-208ENST00000479733 PPRC1Q5VV67 1664 aaKnown RBP25.53■■□□□ 1.68
COL13A1-208ENST00000479733 USP32Q8NFA0 1604 aa25.53■■□□□ 1.68
COL13A1-208ENST00000479733 UHRF1BP1LA0JNW5 1464 aa25.52■■□□□ 1.68
COL13A1-208ENST00000479733 ADGRB3O60242 1522 aa25.52■■□□□ 1.68
COL13A1-208ENST00000479733 CHMP4BQ9H444 224 aaKnown RBP25.52■■□□□ 1.68
COL13A1-208ENST00000479733 TERF2IPQ9NYB0 399 aa25.52■■□□□ 1.68
COL13A1-208ENST00000479733 ZC3H13Q5T200 1668 aaKnown RBP25.51■■□□□ 1.67
COL13A1-208ENST00000479733 COL3A1P02461 1466 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-208ENST00000479733 IBTKQ9P2D0 1353 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-208ENST00000479733 FCHSD2O94868 740 aa25.51■■□□□ 1.67
COL13A1-208ENST00000479733 GPT2Q8TD30 523 aa25.51■■□□□ 1.67
COL13A1-208ENST00000479733 USP26Q9BXU7 913 aa25.51■■□□□ 1.67
COL13A1-208ENST00000479733 NPATQ14207 1427 aa25.5■■□□□ 1.67
COL13A1-208ENST00000479733 VGFO15240 615 aaPredicted RBP25.5■■□□□ 1.67
COL13A1-208ENST00000479733 RNF214Q8ND24 703 aa25.5■■□□□ 1.67
COL13A1-208ENST00000479733 MBIPQ9NS73 344 aa25.5■■□□□ 1.67
COL13A1-208ENST00000479733 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.5■■□□□ 1.67
COL13A1-208ENST00000479733 PUS7Q96PZ0 661 aaKnown RBP25.49■■□□□ 1.67
COL13A1-208ENST00000479733 INO80Q9ULG1 1556 aaPredicted RBP25.49■■□□□ 1.67
COL13A1-208ENST00000479733 SYCE3A1L190 88 aa25.49■■□□□ 1.67
COL13A1-208ENST00000479733 SMARCA5O60264 1052 aaPredicted RBP25.49■■□□□ 1.67
COL13A1-208ENST00000479733 TWISTNBQ3B726 338 aaPredicted RBP25.49■■□□□ 1.67
COL13A1-208ENST00000479733 NOL7Q9UMY1 257 aaKnown RBP25.49■■□□□ 1.67
COL13A1-208ENST00000479733 MED14O60244 1454 aa25.48■■□□□ 1.67
COL13A1-208ENST00000479733 TTC22Q5TAA0 569 aa25.48■■□□□ 1.67
COL13A1-208ENST00000479733 C8orf58Q8NAV2 365 aa25.48■■□□□ 1.67
COL13A1-208ENST00000479733 NSFL1CQ9UNZ2 370 aaKnown RBP25.48■■□□□ 1.67
COL13A1-208ENST00000479733 CYP2E1P05181 493 aaPredicted RBP25.47■■□□□ 1.67
COL13A1-208ENST00000479733 ARHGAP45Q92619 1136 aa25.47■■□□□ 1.67
COL13A1-208ENST00000479733 UQCRHLA0A096LP55 91 aa25.47■■□□□ 1.67
COL13A1-208ENST00000479733 UQCRHP07919 91 aa25.47■■□□□ 1.67
COL13A1-208ENST00000479733 PRAM1Q96QH2 718 aa25.46■■□□□ 1.67
COL13A1-208ENST00000479733 BRPF1P55201 1214 aaPredicted RBP25.46■■□□□ 1.67
COL13A1-208ENST00000479733 ZNF428Q96B54 188 aa25.46■■□□□ 1.67
COL13A1-208ENST00000479733 CABP1Q9NZU7 370 aa25.46■■□□□ 1.67
COL13A1-208ENST00000479733 RPGRIP1LQ68CZ1 1315 aa25.45■■□□□ 1.67
COL13A1-208ENST00000479733 NFE2L2Q16236 605 aa25.45■■□□□ 1.67
COL13A1-208ENST00000479733 OSCARQ8IYS5 282 aa25.45■■□□□ 1.67
COL13A1-208ENST00000479733 TMEM63CQ9P1W3 806 aa25.45■■□□□ 1.67
COL13A1-208ENST00000479733 ZDHHC9Q9Y397 364 aa25.45■■□□□ 1.67
COL13A1-208ENST00000479733 ABCC4O15439 1325 aa25.45■■□□□ 1.66
COL13A1-208ENST00000479733 INTS3Q68E01 1043 aaKnown RBP25.45■■□□□ 1.66
COL13A1-208ENST00000479733 GLI2P10070 1586 aa25.44■■□□□ 1.66
COL13A1-208ENST00000479733 FAM83GA6ND36 823 aa25.44■■□□□ 1.66
COL13A1-208ENST00000479733 ST18O60284 1047 aa25.44■■□□□ 1.66
COL13A1-208ENST00000479733 SDSP20132 328 aa25.44■■□□□ 1.66
COL13A1-208ENST00000479733 HDGFL2Q7Z4V5 671 aaPredicted RBP25.44■■□□□ 1.66
COL13A1-208ENST00000479733 DCTN1Q14203 1278 aa25.43■■□□□ 1.66
COL13A1-208ENST00000479733 GNAI1P63096 354 aa25.43■■□□□ 1.66
COL13A1-208ENST00000479733 FOXD4L6Q3SYB3 417 aaPredicted RBP25.43■■□□□ 1.66
COL13A1-208ENST00000479733 FOXD4L3Q6VB84 417 aaPredicted RBP25.43■■□□□ 1.66
COL13A1-208ENST00000479733 PDLIM2Q96JY6 352 aa25.43■■□□□ 1.66
COL13A1-208ENST00000479733 MPNDQ8N594 471 aa25.42■■□□□ 1.66
COL13A1-208ENST00000479733 DCTPP1Q9H773 170 aa25.42■■□□□ 1.66
COL13A1-208ENST00000479733 POLKQ9UBT6 870 aa25.42■■□□□ 1.66
COL13A1-208ENST00000479733 ZNF500O60304 480 aaPredicted RBP25.41■■□□□ 1.66
COL13A1-208ENST00000479733 HS1BP3Q53T59 392 aa25.41■■□□□ 1.66
COL13A1-208ENST00000479733 NOL8Q76FK4 1167 aaKnown RBP25.41■■□□□ 1.66
COL13A1-208ENST00000479733 CWC22Q9HCG8 908 aaKnown RBP25.41■■□□□ 1.66
COL13A1-208ENST00000479733 ZKSCAN5Q9Y2L8 839 aa25.41■■□□□ 1.66
COL13A1-208ENST00000479733 PPLO60437 1756 aa25.41■■□□□ 1.66
COL13A1-208ENST00000479733 API5Q9BZZ5 524 aaKnown RBP25.4■■□□□ 1.66
COL13A1-208ENST00000479733 PTCH1Q13635 1447 aa25.4■■□□□ 1.66
COL13A1-208ENST00000479733 PIK3R4Q99570 1358 aa25.39■■□□□ 1.65
COL13A1-208ENST00000479733 LRRC7Q96NW7 1537 aa25.39■■□□□ 1.65
COL13A1-208ENST00000479733 IFT57Q9NWB7 429 aa25.39■■□□□ 1.65
COL13A1-208ENST00000479733 EMILIN1Q9Y6C2 1016 aa25.39■■□□□ 1.65
COL13A1-208ENST00000479733 TPRNQ4KMQ1 711 aa25.38■■□□□ 1.65
COL13A1-208ENST00000479733 CASC1Q6TDU7 716 aa25.38■■□□□ 1.65
COL13A1-208ENST00000479733 LRSAM1Q6UWE0 723 aa25.38■■□□□ 1.65
COL13A1-208ENST00000479733 PNPLA6Q8IY17 1366 aa25.38■■□□□ 1.65
COL13A1-208ENST00000479733 KRT24Q2M2I5 525 aa25.37■■□□□ 1.65
COL13A1-208ENST00000479733 CDK19Q9BWU1 502 aa25.37■■□□□ 1.65
COL13A1-208ENST00000479733 PTMAP06454 111 aaKnown RBP25.37■■□□□ 1.65
COL13A1-208ENST00000479733 ARAP3Q8WWN8 1544 aa25.36■■□□□ 1.65
COL13A1-208ENST00000479733 TERF1P54274 439 aa25.36■■□□□ 1.65
COL13A1-208ENST00000479733 IDI1Q13907 227 aa25.36■■□□□ 1.65
COL13A1-208ENST00000479733 NEK4P51957 841 aa25.35■■□□□ 1.65
COL13A1-208ENST00000479733 FAM135BQ49AJ0 1406 aa25.34■■□□□ 1.65
COL13A1-208ENST00000479733 ARHGEF28Q8N1W1 1705 aaKnown RBP25.34■■□□□ 1.65
COL13A1-208ENST00000479733 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
COL13A1-208ENST00000479733 ZNF853P0CG23 659 aa25.33■■□□□ 1.64
COL13A1-208ENST00000479733 CCDC39Q9UFE4 941 aa25.33■■□□□ 1.64
COL13A1-208ENST00000479733 TSHZ3Q63HK5 1081 aa25.32■■□□□ 1.64
COL13A1-208ENST00000479733 CFAP44Q96MT7 982 aa25.32■■□□□ 1.64
COL13A1-208ENST00000479733 REC8O95072 547 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms