RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 USP54Q70EL1 1684 aa18.83■□□□□ 0.61
CLDN18-203ENST00000479660 MST1RQ04912 1400 aa18.83■□□□□ 0.6
CLDN18-203ENST00000479660 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
CLDN18-203ENST00000479660 MSH6P52701 1360 aa18.82■□□□□ 0.6
CLDN18-203ENST00000479660 MARF1Q9Y4F3 1742 aaKnown RBP18.82■□□□□ 0.6
CLDN18-203ENST00000479660 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
CLDN18-203ENST00000479660 PPP4R2Q9NY27 417 aa18.82■□□□□ 0.6
CLDN18-203ENST00000479660 SULT6B1Q6IMI4 303 aa18.81■□□□□ 0.6
CLDN18-203ENST00000479660 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
CLDN18-203ENST00000479660 KIF1AQ12756 1690 aa18.8■□□□□ 0.6
CLDN18-203ENST00000479660 KIF24Q5T7B8 1368 aa18.8■□□□□ 0.6
CLDN18-203ENST00000479660 NFE2L2Q16236 605 aa18.79■□□□□ 0.6
CLDN18-203ENST00000479660 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
CLDN18-203ENST00000479660 LMOD2Q6P5Q4 547 aa18.79■□□□□ 0.6
CLDN18-203ENST00000479660 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
CLDN18-203ENST00000479660 HOXC9P31274 260 aa18.78■□□□□ 0.6
CLDN18-203ENST00000479660 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
CLDN18-203ENST00000479660 PLIN1O60240 522 aa18.78■□□□□ 0.6
CLDN18-203ENST00000479660 IL16Q14005 1332 aa18.76■□□□□ 0.59
CLDN18-203ENST00000479660 XIRP1Q702N8 1843 aaKnown RBP18.75■□□□□ 0.59
CLDN18-203ENST00000479660 ARHGEF10O15013 1369 aa18.75■□□□□ 0.59
CLDN18-203ENST00000479660 PELP1Q8IZL8 1130 aaKnown RBP18.74■□□□□ 0.59
CLDN18-203ENST00000479660 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
CLDN18-203ENST00000479660 TRPM3Q9HCF6 1732 aaPredicted RBP18.74■□□□□ 0.59
CLDN18-203ENST00000479660 GCP02774 474 aa18.74■□□□□ 0.59
CLDN18-203ENST00000479660 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.74■□□□□ 0.59
CLDN18-203ENST00000479660 DDX17Q92841 729 aaKnown RBP18.74■□□□□ 0.59
CLDN18-203ENST00000479660 EYA1Q99502 592 aa18.74■□□□□ 0.59
CLDN18-203ENST00000479660 RTL1A6NKG5 1358 aa18.74■□□□□ 0.59
CLDN18-203ENST00000479660 NFAT5O94916 1531 aa18.74■□□□□ 0.59
CLDN18-203ENST00000479660 NPHP3Q7Z494 1330 aa18.73■□□□□ 0.59
CLDN18-203ENST00000479660 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
CLDN18-203ENST00000479660 IP6K1Q92551 441 aa18.73■□□□□ 0.59
CLDN18-203ENST00000479660 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
CLDN18-203ENST00000479660 BCAR3O75815 825 aa18.72■□□□□ 0.59
CLDN18-203ENST00000479660 LMOD3Q0VAK6 560 aa18.72■□□□□ 0.59
CLDN18-203ENST00000479660 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
CLDN18-203ENST00000479660 TSR2Q969E8 191 aaKnown RBP18.72■□□□□ 0.59
CLDN18-203ENST00000479660 LTV1Q96GA3 475 aaPredicted RBP18.72■□□□□ 0.59
CLDN18-203ENST00000479660 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
CLDN18-203ENST00000479660 ZBTB7CA1YPR0 619 aa18.71■□□□□ 0.59
CLDN18-203ENST00000479660 LTN1O94822 1766 aa18.71■□□□□ 0.59
CLDN18-203ENST00000479660 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
CLDN18-203ENST00000479660 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
CLDN18-203ENST00000479660 USP19O94966 1318 aa18.7■□□□□ 0.58
CLDN18-203ENST00000479660 KDRP35968 1356 aa18.7■□□□□ 0.58
CLDN18-203ENST00000479660 SLIT3O75094 1523 aa18.69■□□□□ 0.58
CLDN18-203ENST00000479660 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
CLDN18-203ENST00000479660 ARHGEF25Q86VW2 580 aa18.69■□□□□ 0.58
CLDN18-203ENST00000479660 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
CLDN18-203ENST00000479660 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
CLDN18-203ENST00000479660 CT47B1P0C2W7 299 aaPredicted RBP18.67■□□□□ 0.58
CLDN18-203ENST00000479660 RARSP54136 660 aaKnown RBP18.67■□□□□ 0.58
CLDN18-203ENST00000479660 EXOSC9Q06265 439 aaKnown RBP18.67■□□□□ 0.58
CLDN18-203ENST00000479660 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
CLDN18-203ENST00000479660 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
CLDN18-203ENST00000479660 DLG5Q8TDM6 1919 aa18.67■□□□□ 0.58
CLDN18-203ENST00000479660 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
CLDN18-203ENST00000479660 ALS2Q96Q42 1657 aa18.67■□□□□ 0.58
CLDN18-203ENST00000479660 CCDC136Q96JN2 1154 aa18.66■□□□□ 0.58
CLDN18-203ENST00000479660 CRBNQ96SW2 442 aa18.66■□□□□ 0.58
CLDN18-203ENST00000479660 GNAI1P63096 354 aa18.65■□□□□ 0.58
CLDN18-203ENST00000479660 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
CLDN18-203ENST00000479660 IFT57Q9NWB7 429 aa18.65■□□□□ 0.58
CLDN18-203ENST00000479660 MTHFSDQ2M296 383 aaKnown RBP18.64■□□□□ 0.58
CLDN18-203ENST00000479660 PXDNQ92626 1479 aa18.64■□□□□ 0.57
CLDN18-203ENST00000479660 PHRF1Q9P1Y6 1649 aaKnown RBP18.64■□□□□ 0.57
CLDN18-203ENST00000479660 TNS3Q68CZ2 1445 aa18.64■□□□□ 0.57
CLDN18-203ENST00000479660 CFAP44Q96MT7 982 aa18.63■□□□□ 0.57
CLDN18-203ENST00000479660 SPATA31A3Q5VYP0 1347 aa18.63■□□□□ 0.57
CLDN18-203ENST00000479660 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
CLDN18-203ENST00000479660 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
CLDN18-203ENST00000479660 ZC3H6P61129 1189 aaKnown RBP18.62■□□□□ 0.57
CLDN18-203ENST00000479660 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
CLDN18-203ENST00000479660 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
CLDN18-203ENST00000479660 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
CLDN18-203ENST00000479660 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
CLDN18-203ENST00000479660 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
CLDN18-203ENST00000479660 MED1Q15648 1581 aaPredicted RBP18.61■□□□□ 0.57
CLDN18-203ENST00000479660 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
CLDN18-203ENST00000479660 MCM10Q7L590 875 aa18.61■□□□□ 0.57
CLDN18-203ENST00000479660 MBIPQ9NS73 344 aa18.61■□□□□ 0.57
CLDN18-203ENST00000479660 CABLES1Q8TDN4 633 aa18.6■□□□□ 0.57
CLDN18-203ENST00000479660 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
CLDN18-203ENST00000479660 AXIN2Q9Y2T1 843 aa18.6■□□□□ 0.57
CLDN18-203ENST00000479660 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
CLDN18-203ENST00000479660 PDE3AQ14432 1141 aa18.59■□□□□ 0.57
CLDN18-203ENST00000479660 LRRC59Q96AG4 307 aaKnown RBP18.59■□□□□ 0.57
CLDN18-203ENST00000479660 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
CLDN18-203ENST00000479660 SMC4Q9NTJ3 1288 aa18.57■□□□□ 0.56
CLDN18-203ENST00000479660 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
CLDN18-203ENST00000479660 HTATSF1O43719 755 aaKnown RBP18.56■□□□□ 0.56
CLDN18-203ENST00000479660 ZNF428Q96B54 188 aa18.56■□□□□ 0.56
CLDN18-203ENST00000479660 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
CLDN18-203ENST00000479660 CHL1O00533 1208 aa18.54■□□□□ 0.56
CLDN18-203ENST00000479660 VAMP4O75379 141 aa18.54■□□□□ 0.56
CLDN18-203ENST00000479660 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
CLDN18-203ENST00000479660 ERBB3P21860 1342 aa18.54■□□□□ 0.56
CLDN18-203ENST00000479660 RGPD2P0DJD1 1756 aa18.54■□□□□ 0.56
CLDN18-203ENST00000479660 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms