RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
LRRFIP1-211ENST00000478958 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
LRRFIP1-211ENST00000478958 ZSCAN30Q86W11 494 aa13.65□□□□□ -0.22
LRRFIP1-211ENST00000478958 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
LRRFIP1-211ENST00000478958 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
LRRFIP1-211ENST00000478958 NSD2O96028 1365 aa13.64□□□□□ -0.23
LRRFIP1-211ENST00000478958 ABCC11Q96J66 1382 aa13.64□□□□□ -0.23
LRRFIP1-211ENST00000478958 SSFA2P28290 1259 aa13.64□□□□□ -0.23
LRRFIP1-211ENST00000478958 TEX2Q8IWB9 1127 aa13.64□□□□□ -0.23
LRRFIP1-211ENST00000478958 KIF2CQ99661 725 aa13.64□□□□□ -0.23
LRRFIP1-211ENST00000478958 RPGRIP1LQ68CZ1 1315 aa13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 ZBTB7BO15156 539 aaPredicted RBP13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 BMP2KLQ5H9B9 411 aa13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 ATAD2Q6PL18 1390 aa13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 MYO3AQ8NEV4 1616 aa13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 DYNC1I1O14576 645 aa13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 DNTTIP2Q5QJE6 756 aaKnown RBP13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
LRRFIP1-211ENST00000478958 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
LRRFIP1-211ENST00000478958 SNX21Q969T3 373 aa13.62□□□□□ -0.23
LRRFIP1-211ENST00000478958 ASXL2Q76L83 1435 aa13.62□□□□□ -0.23
LRRFIP1-211ENST00000478958 DDIT3P35638 169 aa13.62□□□□□ -0.23
LRRFIP1-211ENST00000478958 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
LRRFIP1-211ENST00000478958 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 RAB3GAP1Q15042 981 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 IL16Q14005 1332 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 VAMP4O75379 141 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 TAF3Q5VWG9 929 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 SECISBP2LQ93073 1101 aaKnown RBP13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 ARAP3Q8WWN8 1544 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 DCTN1Q14203 1278 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
LRRFIP1-211ENST00000478958 FCHSD2O94868 740 aa13.6□□□□□ -0.23
LRRFIP1-211ENST00000478958 DDX49Q9Y6V7 483 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-211ENST00000478958 IFT172Q9UG01 1749 aa13.6□□□□□ -0.23
LRRFIP1-211ENST00000478958 NEURL4Q96JN8 1562 aa13.6□□□□□ -0.23
LRRFIP1-211ENST00000478958 C16orf71Q8IYS4 520 aaPredicted RBP13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 GCC1Q96CN9 775 aa13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 GLI2P10070 1586 aa13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 CCDC173Q0VFZ6 552 aa13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 MBIPQ9NS73 344 aa13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
LRRFIP1-211ENST00000478958 ADGRB2O60241 1585 aa13.58□□□□□ -0.23
LRRFIP1-211ENST00000478958 ABCA9Q8IUA7 1624 aa13.58□□□□□ -0.23
LRRFIP1-211ENST00000478958 TWISTNBQ3B726 338 aaPredicted RBP13.58□□□□□ -0.23
LRRFIP1-211ENST00000478958 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.23
LRRFIP1-211ENST00000478958 PUS7Q96PZ0 661 aaKnown RBP13.58□□□□□ -0.23
LRRFIP1-211ENST00000478958 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
LRRFIP1-211ENST00000478958 C8orf58Q8NAV2 365 aa13.58□□□□□ -0.24
LRRFIP1-211ENST00000478958 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
LRRFIP1-211ENST00000478958 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
LRRFIP1-211ENST00000478958 CHMP4AQ9BY43 222 aa13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 GOLGA6L22H0YM25 854 aa13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 GSPT1P15170 499 aaKnown RBP13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 NFE2L2Q16236 605 aa13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 NCOA3Q9Y6Q9 1424 aa13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 ZBTB22O15209 634 aa13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
LRRFIP1-211ENST00000478958 CDC45O75419 566 aa13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 CBX1P83916 185 aa13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 RRS1Q15050 365 aaKnown RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 KRT24Q2M2I5 525 aa13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 FOXD4L5Q5VV16 416 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 FOXD4L4Q8WXT5 416 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 COL3A1P02461 1466 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 CHRM1P11229 460 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 NASPP49321 788 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 IRX3P78415 501 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 PKP1Q13835 747 aa13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 SKOR2Q2VWA4 1001 aaPredicted RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
LRRFIP1-211ENST00000478958 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
LRRFIP1-211ENST00000478958 CHAMP1Q96JM3 812 aa13.55□□□□□ -0.24
LRRFIP1-211ENST00000478958 BAG4O95429 457 aaKnown RBP13.55□□□□□ -0.24
LRRFIP1-211ENST00000478958 GNAI1P63096 354 aa13.55□□□□□ -0.24
LRRFIP1-211ENST00000478958 PPLO60437 1756 aa13.55□□□□□ -0.24
LRRFIP1-211ENST00000478958 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
LRRFIP1-211ENST00000478958 CAVIN1Q6NZI2 390 aaKnown RBP13.54□□□□□ -0.24
LRRFIP1-211ENST00000478958 NME9Q86XW9 330 aa13.54□□□□□ -0.24
LRRFIP1-211ENST00000478958 ZC3H13Q5T200 1668 aaKnown RBP13.54□□□□□ -0.24
LRRFIP1-211ENST00000478958 LMTK2Q8IWU2 1503 aa13.54□□□□□ -0.24
LRRFIP1-211ENST00000478958 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
LRRFIP1-211ENST00000478958 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
LRRFIP1-211ENST00000478958 CAMSAP1Q5T5Y3 1602 aa13.53□□□□□ -0.24
LRRFIP1-211ENST00000478958 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
LRRFIP1-211ENST00000478958 PPP1R9BQ96SB3 815 aa13.53□□□□□ -0.24
LRRFIP1-211ENST00000478958 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
LRRFIP1-211ENST00000478958 ABCC3O15438 1527 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 CD163L1Q9NR16 1453 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms