RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	SENP3-EIF4A1	A0A087X0R7	540 aa		12.54	□□□□□ -0.4
ATG7-223	ENST00000478638	ADAMTS2	O95450	1211 aa		12.54	□□□□□ -0.4
ATG7-223	ENST00000478638	CCDC146	Q8IYE0	955 aa		12.54	□□□□□ -0.4
ATG7-223	ENST00000478638	CABLES1	Q8TDN4	633 aa		12.54	□□□□□ -0.4
ATG7-223	ENST00000478638	SALL2	Q9Y467	1007 aa	Predicted RBP	12.54	□□□□□ -0.4
ATG7-223	ENST00000478638	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.53	□□□□□ -0.4
ATG7-223	ENST00000478638	TCP11L2	Q8N4U5	519 aa		12.52	□□□□□ -0.41
ATG7-223	ENST00000478638	POLK	Q9UBT6	870 aa		12.52	□□□□□ -0.41
ATG7-223	ENST00000478638	USP31	Q70CQ4	1352 aa		12.52	□□□□□ -0.41
ATG7-223	ENST00000478638	COL16A1	Q07092	1604 aa	Predicted RBP	12.51	□□□□□ -0.41
ATG7-223	ENST00000478638	B4GALNT3	Q6L9W6	998 aa		12.51	□□□□□ -0.41
ATG7-223	ENST00000478638	NME9	Q86XW9	330 aa		12.51	□□□□□ -0.41
ATG7-223	ENST00000478638	NHSL1	Q5SYE7	1610 aa		12.51	□□□□□ -0.41
ATG7-223	ENST00000478638	GC	P02774	474 aa		12.5	□□□□□ -0.41
ATG7-223	ENST00000478638	TNNT2	P45379	298 aa	Predicted RBP	12.5	□□□□□ -0.41
ATG7-223	ENST00000478638	NGLY1	Q96IV0	654 aa		12.5	□□□□□ -0.41
ATG7-223	ENST00000478638	COG3	Q96JB2	828 aa		12.5	□□□□□ -0.41
ATG7-223	ENST00000478638	RGPD8	O14715	1765 aa	Predicted RBP	12.49	□□□□□ -0.41
ATG7-223	ENST00000478638	RGPD1	P0DJD0	1748 aa		12.49	□□□□□ -0.41
ATG7-223	ENST00000478638	IL16	Q14005	1332 aa		12.49	□□□□□ -0.41
ATG7-223	ENST00000478638	ZC3H6	P61129	1189 aa	Known RBP	12.49	□□□□□ -0.41
ATG7-223	ENST00000478638	C8orf37	Q96NL8	207 aa		12.49	□□□□□ -0.41
ATG7-223	ENST00000478638	ZRANB1	Q9UGI0	708 aa		12.49	□□□□□ -0.41
ATG7-223	ENST00000478638	MARF1	Q9Y4F3	1742 aa	Known RBP	12.48	□□□□□ -0.41
ATG7-223	ENST00000478638	ZBTB7C	A1YPR0	619 aa		12.48	□□□□□ -0.41
ATG7-223	ENST00000478638	SOX12	O15370	315 aa		12.48	□□□□□ -0.41
ATG7-223	ENST00000478638	DIAPH1	O60610	1272 aa	Known RBP	12.48	□□□□□ -0.41
ATG7-223	ENST00000478638	FCHSD2	O94868	740 aa		12.48	□□□□□ -0.41
ATG7-223	ENST00000478638	KCNH5	Q8NCM2	988 aa		12.48	□□□□□ -0.41
ATG7-223	ENST00000478638	EXOC6	Q8TAG9	804 aa		12.48	□□□□□ -0.41
ATG7-223	ENST00000478638	CT47B1	P0C2W7	299 aa	Predicted RBP	12.47	□□□□□ -0.41
ATG7-223	ENST00000478638	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.47	□□□□□ -0.41
ATG7-223	ENST00000478638	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
ATG7-223	ENST00000478638	PNN	Q9H307	717 aa	Known RBP	12.47	□□□□□ -0.41
ATG7-223	ENST00000478638	USP19	O94966	1318 aa		12.46	□□□□□ -0.41
ATG7-223	ENST00000478638	IL13	P35225	146 aa		12.46	□□□□□ -0.41
ATG7-223	ENST00000478638	TMPO	P42166	694 aa	Known RBP	12.46	□□□□□ -0.41
ATG7-223	ENST00000478638	CCDC136	Q96JN2	1154 aa		12.46	□□□□□ -0.41
ATG7-223	ENST00000478638	RSPH6A	Q9H0K4	717 aa		12.46	□□□□□ -0.41
ATG7-223	ENST00000478638	PRDM11	Q9NQV5	511 aa		12.46	□□□□□ -0.41
ATG7-223	ENST00000478638	PEAK1	Q9H792	1746 aa		12.45	□□□□□ -0.42
ATG7-223	ENST00000478638	PIK3C2A	O00443	1686 aa		12.45	□□□□□ -0.42
ATG7-223	ENST00000478638	FAM83G	A6ND36	823 aa		12.45	□□□□□ -0.42
ATG7-223	ENST00000478638	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.45	□□□□□ -0.42
ATG7-223	ENST00000478638	TRIM35	Q9UPQ4	493 aa		12.45	□□□□□ -0.42
ATG7-223	ENST00000478638	PDE3A	Q14432	1141 aa		12.44	□□□□□ -0.42
ATG7-223	ENST00000478638	CHRNA2	Q15822	529 aa		12.44	□□□□□ -0.42
ATG7-223	ENST00000478638	ZNF772	Q68DY9	489 aa	Predicted RBP	12.44	□□□□□ -0.42
ATG7-223	ENST00000478638	AFF2	P51816	1311 aa		12.43	□□□□□ -0.42
ATG7-223	ENST00000478638	CRBN	Q96SW2	442 aa		12.43	□□□□□ -0.42
ATG7-223	ENST00000478638	MYH16	Q9H6N6	1097 aa		12.43	□□□□□ -0.42
ATG7-223	ENST00000478638	USP21	Q9UK80	565 aa		12.43	□□□□□ -0.42
ATG7-223	ENST00000478638	KIF24	Q5T7B8	1368 aa		12.43	□□□□□ -0.42
ATG7-223	ENST00000478638	LRP6	O75581	1613 aa		12.42	□□□□□ -0.42
ATG7-223	ENST00000478638	EVA1C	P58658	441 aa		12.42	□□□□□ -0.42
ATG7-223	ENST00000478638	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.42	□□□□□ -0.42
ATG7-223	ENST00000478638	DLG5	Q8TDM6	1919 aa		12.42	□□□□□ -0.42
ATG7-223	ENST00000478638	KIAA0232	Q92628	1395 aa		12.42	□□□□□ -0.42
ATG7-223	ENST00000478638	KDM2B	Q8NHM5	1336 aa		12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	PLIN1	O60240	522 aa		12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	C20orf194	Q5TEA3	1177 aa		12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	ARHGEF25	Q86VW2	580 aa		12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	QTRT2	Q9H974	415 aa	Known RBP	12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	BTG4	Q9NY30	223 aa		12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	RRP7A	Q9Y3A4	280 aa	Known RBP	12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	RBM19	Q9Y4C8	960 aa	Known RBP	12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	EMILIN1	Q9Y6C2	1016 aa		12.41	□□□□□ -0.42
ATG7-223	ENST00000478638	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	MED1	Q15648	1581 aa	Predicted RBP	12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	U2SURP	O15042	1029 aa	Known RBP	12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	FBLN1	P23142	703 aa		12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	AMPH	P49418	695 aa		12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	RARS	P54136	660 aa	Known RBP	12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	AAMP	Q13685	434 aa		12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	UNC5CL	Q8IV45	518 aa		12.4	□□□□□ -0.42
ATG7-223	ENST00000478638	MAPK8IP3	Q9UPT6	1336 aa		12.39	□□□□□ -0.43
ATG7-223	ENST00000478638	STRN4	Q9NRL3	753 aa		12.39	□□□□□ -0.43
ATG7-223	ENST00000478638	CCDC9	Q9Y3X0	531 aa	Known RBP	12.39	□□□□□ -0.43
ATG7-223	ENST00000478638	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.39	□□□□□ -0.43
ATG7-223	ENST00000478638	CPD	O75976	1380 aa		12.39	□□□□□ -0.43
ATG7-223	ENST00000478638	FANCI	Q9NVI1	1328 aa		12.38	□□□□□ -0.43
ATG7-223	ENST00000478638	PPM1G	O15355	546 aa	Predicted RBP	12.38	□□□□□ -0.43
ATG7-223	ENST00000478638	RRS1	Q15050	365 aa	Known RBP	12.38	□□□□□ -0.43
ATG7-223	ENST00000478638	NFE2L2	Q16236	605 aa		12.38	□□□□□ -0.43
ATG7-223	ENST00000478638	RGS17	Q9UGC6	210 aa	Predicted RBP	12.38	□□□□□ -0.43
ATG7-223	ENST00000478638	TRPC5	Q9UL62	973 aa	Predicted RBP	12.38	□□□□□ -0.43
ATG7-223	ENST00000478638	ALS2	Q96Q42	1657 aa		12.38	□□□□□ -0.43
ATG7-223	ENST00000478638	BCAR3	O75815	825 aa		12.37	□□□□□ -0.43
ATG7-223	ENST00000478638	CSB-PGBD3	P0DP91	1061 aa		12.37	□□□□□ -0.43
ATG7-223	ENST00000478638	PRKAR2B	P31323	418 aa		12.37	□□□□□ -0.43
ATG7-223	ENST00000478638	BRPF1	P55201	1214 aa	Predicted RBP	12.37	□□□□□ -0.43
ATG7-223	ENST00000478638	IP6K1	Q92551	441 aa		12.37	□□□□□ -0.43
ATG7-223	ENST00000478638	KDR	P35968	1356 aa		12.37	□□□□□ -0.43
ATG7-223	ENST00000478638	MAP3K19	Q56UN5	1328 aa		12.37	□□□□□ -0.43
ATG7-223	ENST00000478638	ZNF853	P0CG23	659 aa		12.36	□□□□□ -0.43
ATG7-223	ENST00000478638	RXRB	P28702	533 aa		12.36	□□□□□ -0.43
ATG7-223	ENST00000478638	POTEA	Q6S8J7	498 aa		12.36	□□□□□ -0.43
ATG7-223	ENST00000478638	ZNF428	Q96B54	188 aa		12.36	□□□□□ -0.43
ATG7-223	ENST00000478638	AXIN2	Q9Y2T1	843 aa		12.36	□□□□□ -0.43

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