RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 RALGAPBQ86X10 1494 aa17.19■□□□□ 0.34
NPHP4-208ENST00000478423 BECN2A8MW95 431 aa17.18■□□□□ 0.34
NPHP4-208ENST00000478423 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
NPHP4-208ENST00000478423 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
NPHP4-208ENST00000478423 TESK2Q96S53 571 aa17.17■□□□□ 0.34
NPHP4-208ENST00000478423 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
NPHP4-208ENST00000478423 NFXL1Q6ZNB6 911 aa17.17■□□□□ 0.34
NPHP4-208ENST00000478423 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
NPHP4-208ENST00000478423 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
NPHP4-208ENST00000478423 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
NPHP4-208ENST00000478423 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
NPHP4-208ENST00000478423 GOLGA6L19H0YKK7 550 aa17.17■□□□□ 0.34
NPHP4-208ENST00000478423 RABEP1Q15276 862 aa17.16■□□□□ 0.34
NPHP4-208ENST00000478423 ZNF518AQ6AHZ1 1483 aa17.16■□□□□ 0.34
NPHP4-208ENST00000478423 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
NPHP4-208ENST00000478423 NSD2O96028 1365 aa17.16■□□□□ 0.34
NPHP4-208ENST00000478423 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-208ENST00000478423 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-208ENST00000478423 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-208ENST00000478423 FYB1O15117 783 aa17.15■□□□□ 0.34
NPHP4-208ENST00000478423 ACEP12821 1306 aa17.15■□□□□ 0.34
NPHP4-208ENST00000478423 ALDH1L2Q3SY69 923 aa17.15■□□□□ 0.34
NPHP4-208ENST00000478423 DISP1Q96F81 1524 aa17.15■□□□□ 0.34
NPHP4-208ENST00000478423 FOSBP53539 338 aa17.15■□□□□ 0.34
NPHP4-208ENST00000478423 NUP160Q12769 1436 aa17.15■□□□□ 0.34
NPHP4-208ENST00000478423 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-208ENST00000478423 PSMA5P28066 241 aa17.14■□□□□ 0.33
NPHP4-208ENST00000478423 TNRQ92752 1358 aa17.14■□□□□ 0.33
NPHP4-208ENST00000478423 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
NPHP4-208ENST00000478423 ERICH2A1L162 156 aa17.13■□□□□ 0.33
NPHP4-208ENST00000478423 RAD21O60216 631 aa17.13■□□□□ 0.33
NPHP4-208ENST00000478423 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
NPHP4-208ENST00000478423 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
NPHP4-208ENST00000478423 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
NPHP4-208ENST00000478423 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
NPHP4-208ENST00000478423 TRIM27P14373 513 aa17.13■□□□□ 0.33
NPHP4-208ENST00000478423 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
NPHP4-208ENST00000478423 HIP1O00291 1037 aa17.12■□□□□ 0.33
NPHP4-208ENST00000478423 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
NPHP4-208ENST00000478423 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-208ENST00000478423 F6X3S4 739 aa17.12■□□□□ 0.33
NPHP4-208ENST00000478423 MCM2P49736 904 aa17.12■□□□□ 0.33
NPHP4-208ENST00000478423 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
NPHP4-208ENST00000478423 LRPPRCP42704 1394 aaKnown RBP17.12■□□□□ 0.33
NPHP4-208ENST00000478423 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
NPHP4-208ENST00000478423 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
NPHP4-208ENST00000478423 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
NPHP4-208ENST00000478423 FBXW7Q969H0 707 aa17.11■□□□□ 0.33
NPHP4-208ENST00000478423 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
NPHP4-208ENST00000478423 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
NPHP4-208ENST00000478423 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
NPHP4-208ENST00000478423 ANKRD36BQ8N2N9 1353 aa17.1■□□□□ 0.33
NPHP4-208ENST00000478423 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
NPHP4-208ENST00000478423 AACSQ86V21 672 aa17.1■□□□□ 0.33
NPHP4-208ENST00000478423 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
NPHP4-208ENST00000478423 ABCC10Q5T3U5 1492 aa17.09■□□□□ 0.33
NPHP4-208ENST00000478423 HSP90AB2PQ58FF8 381 aa17.09■□□□□ 0.33
NPHP4-208ENST00000478423 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
NPHP4-208ENST00000478423 CCDC158Q5M9N0 1113 aa17.09■□□□□ 0.33
NPHP4-208ENST00000478423 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
NPHP4-208ENST00000478423 TPD52L1Q16890 204 aaPredicted RBP17.08■□□□□ 0.33
NPHP4-208ENST00000478423 CCDC57Q2TAC2 916 aa17.08■□□□□ 0.33
NPHP4-208ENST00000478423 ARID3AQ99856 593 aa17.08■□□□□ 0.33
NPHP4-208ENST00000478423 TRAK2O60296 914 aa17.08■□□□□ 0.32
NPHP4-208ENST00000478423 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
NPHP4-208ENST00000478423 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
NPHP4-208ENST00000478423 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
NPHP4-208ENST00000478423 SHANK2Q9UPX8 1470 aa17.07■□□□□ 0.32
NPHP4-208ENST00000478423 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
NPHP4-208ENST00000478423 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
NPHP4-208ENST00000478423 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
NPHP4-208ENST00000478423 PZPP20742 1482 aa17.07■□□□□ 0.32
NPHP4-208ENST00000478423 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
NPHP4-208ENST00000478423 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-208ENST00000478423 MBIPQ9NS73 344 aa17.06■□□□□ 0.32
NPHP4-208ENST00000478423 SMARCA5O60264 1052 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-208ENST00000478423 PDCP20941 246 aa17.05■□□□□ 0.32
NPHP4-208ENST00000478423 CARD14Q9BXL6 1004 aa17.05■□□□□ 0.32
NPHP4-208ENST00000478423 ABCC2Q92887 1545 aa17.05■□□□□ 0.32
NPHP4-208ENST00000478423 PIP4K2BP78356 416 aa17.05■□□□□ 0.32
NPHP4-208ENST00000478423 TTC39AQ5SRH9 613 aa17.05■□□□□ 0.32
NPHP4-208ENST00000478423 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
NPHP4-208ENST00000478423 PER1O15534 1290 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-208ENST00000478423 CYP46A1Q9Y6A2 500 aa17.05■□□□□ 0.32
NPHP4-208ENST00000478423 K7ELQ4 463 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-208ENST00000478423 CWC27Q6UX04 472 aaKnown RBP17.04■□□□□ 0.32
NPHP4-208ENST00000478423 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
NPHP4-208ENST00000478423 KIF1BPQ96EK5 621 aa17.04■□□□□ 0.32
NPHP4-208ENST00000478423 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
NPHP4-208ENST00000478423 FLIIQ13045 1269 aa17.04■□□□□ 0.32
NPHP4-208ENST00000478423 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
NPHP4-208ENST00000478423 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
NPHP4-208ENST00000478423 FKBP4Q02790 459 aaKnown RBP eCLIP17.03■□□□□ 0.32
NPHP4-208ENST00000478423 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
NPHP4-208ENST00000478423 TEX14Q8IWB6 1497 aa17.03■□□□□ 0.32
NPHP4-208ENST00000478423 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
NPHP4-208ENST00000478423 SASS6Q6UVJ0 657 aa17.03■□□□□ 0.32
NPHP4-208ENST00000478423 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
NPHP4-208ENST00000478423 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
NPHP4-208ENST00000478423 DBF4Q9UBU7 674 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms