RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 ADGRB1O14514 1584 aa10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 SETBP1Q9Y6X0 1596 aa10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 NLRP1Q9C000 1473 aa10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 BRPF1P55201 1214 aaPredicted RBP10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 ZSCAN30Q86W11 494 aa10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 MYCBPQ99417 103 aaPredicted RBP10.33□□□□□ -0.76
CNTNAP3B-205ENST00000476961 RIMS1Q86UR5 1692 aaKnown RBP10.32□□□□□ -0.76
CNTNAP3B-205ENST00000476961 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
CNTNAP3B-205ENST00000476961 TIGD1Q96MW7 591 aa10.32□□□□□ -0.76
CNTNAP3B-205ENST00000476961 SENP3Q9H4L4 574 aaPredicted RBP10.32□□□□□ -0.76
CNTNAP3B-205ENST00000476961 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
CNTNAP3B-205ENST00000476961 UBR1Q8IWV7 1749 aa10.31□□□□□ -0.76
CNTNAP3B-205ENST00000476961 ATP2B3Q16720 1220 aa10.31□□□□□ -0.76
CNTNAP3B-205ENST00000476961 GRPEL1Q9HAV7 217 aa10.31□□□□□ -0.76
CNTNAP3B-205ENST00000476961 ISY1Q9ULR0 285 aaKnown RBP10.31□□□□□ -0.76
CNTNAP3B-205ENST00000476961 KDM5AP29375 1690 aaKnown RBP10.31□□□□□ -0.76
CNTNAP3B-205ENST00000476961 CCDC172P0C7W6 258 aa10.31□□□□□ -0.76
CNTNAP3B-205ENST00000476961 CCDC66A2RUB6 948 aa10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 ZNF771Q7L3S4 317 aaPredicted RBP10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 OTUD6BQ8N6M0 293 aa10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 NCAPGQ9BPX3 1015 aa10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 DISP3Q9P2K9 1392 aa10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 TMEM2Q9UHN6 1383 aa10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 ASXL1Q8IXJ9 1541 aa10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 NBPF10Q6P3W6 841 aaKnown RBP10.3□□□□□ -0.76
CNTNAP3B-205ENST00000476961 SMC4Q9NTJ3 1288 aa10.29□□□□□ -0.76
CNTNAP3B-205ENST00000476961 KIF3AQ9Y496 699 aa10.29□□□□□ -0.76
CNTNAP3B-205ENST00000476961 EIF3AQ14152 1382 aaKnown RBP10.29□□□□□ -0.76
CNTNAP3B-205ENST00000476961 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
CNTNAP3B-205ENST00000476961 SGSM3Q96HU1 749 aa10.28□□□□□ -0.76
CNTNAP3B-205ENST00000476961 TRAK1Q9UPV9 953 aa10.28□□□□□ -0.76
CNTNAP3B-205ENST00000476961 MYO3AQ8NEV4 1616 aa10.28□□□□□ -0.76
CNTNAP3B-205ENST00000476961 PTPRMP28827 1452 aa10.28□□□□□ -0.76
CNTNAP3B-205ENST00000476961 TMF1P82094 1093 aa10.27□□□□□ -0.76
CNTNAP3B-205ENST00000476961 BORCS6Q96GS4 357 aa10.27□□□□□ -0.76
CNTNAP3B-205ENST00000476961 LTKP29376 864 aa10.27□□□□□ -0.77
CNTNAP3B-205ENST00000476961 TERF2IPQ9NYB0 399 aa10.27□□□□□ -0.77
CNTNAP3B-205ENST00000476961 MSNP26038 577 aaKnown RBP10.26□□□□□ -0.77
CNTNAP3B-205ENST00000476961 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
CNTNAP3B-205ENST00000476961 SASS6Q6UVJ0 657 aa10.26□□□□□ -0.77
CNTNAP3B-205ENST00000476961 NRXN3Q9Y4C0 1643 aa10.26□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ARHGAP23Q9P227 1491 aa10.26□□□□□ -0.77
CNTNAP3B-205ENST00000476961 SLIT1O75093 1534 aa10.26□□□□□ -0.77
CNTNAP3B-205ENST00000476961 SETD1AO15047 1707 aaKnown RBP10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 NBPF6Q5VWK0 638 aa10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 NBPF5PQ86XG9 351 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 THEMISQ8N1K5 641 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 NBPF4Q96M43 638 aa10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 YTHDC2Q9H6S0 1430 aaKnown RBP10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 CEP170BQ9Y4F5 1589 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 KIF16BQ96L93 1317 aa10.25□□□□□ -0.77
CNTNAP3B-205ENST00000476961 NOP2P46087 812 aaKnown RBP10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 TXNDC2Q86VQ3 553 aa10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 FEZ2Q9UHY8 353 aaPredicted RBP10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 GTF2A1P52655 376 aaPredicted RBP10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 FAM9BQ8IZU0 186 aa10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ARHGEF28Q8N1W1 1705 aaKnown RBP10.24□□□□□ -0.77
CNTNAP3B-205ENST00000476961 MFAP1P55081 439 aaKnown RBP10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 PPP1R9BQ96SB3 815 aa10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 BSDC1Q9NW68 430 aaPredicted RBP10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 METP08581 1390 aa10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 PLEKHG1Q9ULL1 1385 aa10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ADAMTS13Q76LX8 1427 aa10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 SSR1P43307 286 aaKnown RBP10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 GABPB1Q06547 395 aaPredicted RBP10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ZKSCAN8Q15776 578 aaPredicted RBP10.23□□□□□ -0.77
CNTNAP3B-205ENST00000476961 CALCOCO1Q9P1Z2 691 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 EID1Q9Y6B2 187 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 SMG6Q86US8 1419 aaKnown RBP10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 CCDC173Q0VFZ6 552 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 CASC1Q6TDU7 716 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 TMTC2Q8N394 836 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ZNF513Q8N8E2 541 aaPredicted RBP10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 DONSONQ9NYP3 566 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 LRPPRCP42704 1394 aaKnown RBP10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 NINLQ9Y2I6 1382 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 QRICH2Q9H0J4 1663 aa10.22□□□□□ -0.77
CNTNAP3B-205ENST00000476961 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
CNTNAP3B-205ENST00000476961 GZF1Q9H116 711 aaPredicted RBP10.21□□□□□ -0.77
CNTNAP3B-205ENST00000476961 ZNF142P52746 1687 aaPredicted RBP10.21□□□□□ -0.77
CNTNAP3B-205ENST00000476961 BECN1Q14457 450 aa10.21□□□□□ -0.78
CNTNAP3B-205ENST00000476961 CCDC96Q2M329 555 aa10.21□□□□□ -0.78
CNTNAP3B-205ENST00000476961 MED14O60244 1454 aa10.21□□□□□ -0.78
CNTNAP3B-205ENST00000476961 ABCC11Q96J66 1382 aa10.21□□□□□ -0.78
CNTNAP3B-205ENST00000476961 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 TNNT3P45378 269 aaPredicted RBP10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 SAFB2Q14151 953 aaKnown RBP eCLIP10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 RBM28Q9NW13 759 aaKnown RBP10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 SETD1BQ9UPS6 1966 aaKnown RBP10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 DLC1Q96QB1 1528 aa10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 SLFN14P0C7P3 912 aa10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 CALR3Q96L12 384 aaKnown RBP10.2□□□□□ -0.78
CNTNAP3B-205ENST00000476961 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms