RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 OVOS2A0A0J9YW53 1432 aa21.11■□□□□ 0.97
TMEM53-208ENST00000476724 OVOS2Q6IE36 1432 aa21.11■□□□□ 0.97
TMEM53-208ENST00000476724 AATKQ6ZMQ8 1374 aa21.09■□□□□ 0.97
TMEM53-208ENST00000476724 FCHSD2O94868 740 aa21.09■□□□□ 0.97
TMEM53-208ENST00000476724 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
TMEM53-208ENST00000476724 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
TMEM53-208ENST00000476724 RGS3P49796 1198 aa21.08■□□□□ 0.97
TMEM53-208ENST00000476724 C14orf37Q86TY3 774 aa21.08■□□□□ 0.96
TMEM53-208ENST00000476724 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.96
TMEM53-208ENST00000476724 PIK3C2AO00443 1686 aa21.08■□□□□ 0.96
TMEM53-208ENST00000476724 ZKSCAN2Q63HK3 967 aa21.06■□□□□ 0.96
TMEM53-208ENST00000476724 PROSER2Q86WR7 435 aaPredicted RBP21.06■□□□□ 0.96
TMEM53-208ENST00000476724 TTC21AQ8NDW8 1320 aa21.06■□□□□ 0.96
TMEM53-208ENST00000476724 CDK12Q9NYV4 1490 aaPredicted RBP21.05■□□□□ 0.96
TMEM53-208ENST00000476724 RIPK4P57078 832 aa21.05■□□□□ 0.96
TMEM53-208ENST00000476724 STRCQ7RTU9 1775 aa21.04■□□□□ 0.96
TMEM53-208ENST00000476724 NEFMP07197 916 aa21.04■□□□□ 0.96
TMEM53-208ENST00000476724 PHF8Q9UPP1 1060 aa21.04■□□□□ 0.96
TMEM53-208ENST00000476724 RLBP1P12271 317 aa21.03■□□□□ 0.96
TMEM53-208ENST00000476724 NBR1Q14596 966 aa21.03■□□□□ 0.96
TMEM53-208ENST00000476724 MARF1Q9Y4F3 1742 aaKnown RBP21.03■□□□□ 0.96
TMEM53-208ENST00000476724 EXOSC9Q06265 439 aaKnown RBP21.03■□□□□ 0.96
TMEM53-208ENST00000476724 MVPQ14764 893 aaKnown RBP21.03■□□□□ 0.96
TMEM53-208ENST00000476724 BCL2L13Q9BXK5 485 aa21.03■□□□□ 0.96
TMEM53-208ENST00000476724 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
TMEM53-208ENST00000476724 DZIP1LQ8IYY4 767 aaKnown RBP21.02■□□□□ 0.96
TMEM53-208ENST00000476724 RWDD1Q9H446 243 aaPredicted RBP21.02■□□□□ 0.96
TMEM53-208ENST00000476724 USP31Q70CQ4 1352 aa21.02■□□□□ 0.96
TMEM53-208ENST00000476724 PEAK1Q9H792 1746 aa21.02■□□□□ 0.96
TMEM53-208ENST00000476724 SOX12O15370 315 aa21.01■□□□□ 0.95
TMEM53-208ENST00000476724 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
TMEM53-208ENST00000476724 RTL5Q5HYW3 569 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-208ENST00000476724 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
TMEM53-208ENST00000476724 IL13P35225 146 aa21■□□□□ 0.95
TMEM53-208ENST00000476724 FTSJ3Q8IY81 847 aaKnown RBP21■□□□□ 0.95
TMEM53-208ENST00000476724 LRRC7Q96NW7 1537 aa21■□□□□ 0.95
TMEM53-208ENST00000476724 SMC4Q9NTJ3 1288 aa21■□□□□ 0.95
TMEM53-208ENST00000476724 PCDHB15Q9Y5E8 787 aa21■□□□□ 0.95
TMEM53-208ENST00000476724 ORAI2Q96SN7 254 aa20.99■□□□□ 0.95
TMEM53-208ENST00000476724 RSPH6AQ9H0K4 717 aa20.99■□□□□ 0.95
TMEM53-208ENST00000476724 NUTM2GQ5VZR2 741 aa20.98■□□□□ 0.95
TMEM53-208ENST00000476724 ZNF428Q96B54 188 aa20.98■□□□□ 0.95
TMEM53-208ENST00000476724 USP35Q9P2H5 1018 aa20.98■□□□□ 0.95
TMEM53-208ENST00000476724 TNNQ9UQP3 1299 aa20.98■□□□□ 0.95
TMEM53-208ENST00000476724 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
TMEM53-208ENST00000476724 DAXXQ9UER7 740 aaPredicted RBP20.97■□□□□ 0.95
TMEM53-208ENST00000476724 NLRP6P59044 892 aa20.97■□□□□ 0.95
TMEM53-208ENST00000476724 CALD1Q05682 793 aaKnown RBP20.97■□□□□ 0.95
TMEM53-208ENST00000476724 USP54Q70EL1 1684 aa20.96■□□□□ 0.95
TMEM53-208ENST00000476724 HMOX1P09601 288 aa20.96■□□□□ 0.95
TMEM53-208ENST00000476724 PRKAR2BP31323 418 aa20.96■□□□□ 0.95
TMEM53-208ENST00000476724 ALDH1L2Q3SY69 923 aa20.96■□□□□ 0.95
TMEM53-208ENST00000476724 SSH1Q8WYL5 1049 aa20.96■□□□□ 0.95
TMEM53-208ENST00000476724 DDX19BQ9UMR2 479 aa20.96■□□□□ 0.95
TMEM53-208ENST00000476724 IPO8O15397 1037 aaKnown RBP20.95■□□□□ 0.94
TMEM53-208ENST00000476724 ATF7IPQ6VMQ6 1270 aa20.95■□□□□ 0.94
TMEM53-208ENST00000476724 C19orf44Q9H6X5 657 aa20.95■□□□□ 0.94
TMEM53-208ENST00000476724 KIF16BQ96L93 1317 aa20.95■□□□□ 0.94
TMEM53-208ENST00000476724 ABTB2Q8N961 1025 aa20.95■□□□□ 0.94
TMEM53-208ENST00000476724 MAP3K19Q56UN5 1328 aa20.94■□□□□ 0.94
TMEM53-208ENST00000476724 TRIM27P14373 513 aa20.93■□□□□ 0.94
TMEM53-208ENST00000476724 NFE2L2Q16236 605 aa20.93■□□□□ 0.94
TMEM53-208ENST00000476724 XIRP1Q702N8 1843 aaKnown RBP20.93■□□□□ 0.94
TMEM53-208ENST00000476724 BRPF1P55201 1214 aaPredicted RBP20.93■□□□□ 0.94
TMEM53-208ENST00000476724 HSP90AB2PQ58FF8 381 aa20.93■□□□□ 0.94
TMEM53-208ENST00000476724 C1orf167Q5SNV9 1468 aa20.93■□□□□ 0.94
TMEM53-208ENST00000476724 PSME1Q06323 249 aa20.92■□□□□ 0.94
TMEM53-208ENST00000476724 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
TMEM53-208ENST00000476724 FOXO3O43524 673 aa20.92■□□□□ 0.94
TMEM53-208ENST00000476724 DEKP35659 375 aaKnown RBP20.92■□□□□ 0.94
TMEM53-208ENST00000476724 PDZRN3Q9UPQ7 1066 aa20.92■□□□□ 0.94
TMEM53-208ENST00000476724 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
TMEM53-208ENST00000476724 NOB1Q9ULX3 412 aaKnown RBP20.9■□□□□ 0.94
TMEM53-208ENST00000476724 HDAC1Q13547 482 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-208ENST00000476724 PHACTR3Q96KR7 559 aa20.9■□□□□ 0.94
TMEM53-208ENST00000476724 MST1RQ04912 1400 aa20.89■□□□□ 0.93
TMEM53-208ENST00000476724 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
TMEM53-208ENST00000476724 RGPD1P0DJD0 1748 aa20.88■□□□□ 0.93
TMEM53-208ENST00000476724 GNAI1P63096 354 aa20.88■□□□□ 0.93
TMEM53-208ENST00000476724 LAS1LQ9Y4W2 734 aaKnown RBP20.88■□□□□ 0.93
TMEM53-208ENST00000476724 KIF1AQ12756 1690 aa20.88■□□□□ 0.93
TMEM53-208ENST00000476724 SBNO1A3KN83 1393 aa20.88■□□□□ 0.93
TMEM53-208ENST00000476724 ITPRIPQ8IWB1 547 aa20.87■□□□□ 0.93
TMEM53-208ENST00000476724 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
TMEM53-208ENST00000476724 TRPM3Q9HCF6 1732 aaPredicted RBP20.87■□□□□ 0.93
TMEM53-208ENST00000476724 ATF3P18847 181 aa20.87■□□□□ 0.93
TMEM53-208ENST00000476724 IFT57Q9NWB7 429 aa20.87■□□□□ 0.93
TMEM53-208ENST00000476724 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
TMEM53-208ENST00000476724 FLT4P35916 1363 aa20.86■□□□□ 0.93
TMEM53-208ENST00000476724 LTN1O94822 1766 aa20.85■□□□□ 0.93
TMEM53-208ENST00000476724 CHMP4BQ9H444 224 aaKnown RBP20.85■□□□□ 0.93
TMEM53-208ENST00000476724 ZNF335Q9H4Z2 1342 aaPredicted RBP20.85■□□□□ 0.93
TMEM53-208ENST00000476724 DCCP43146 1447 aa20.85■□□□□ 0.93
TMEM53-208ENST00000476724 DLG5Q8TDM6 1919 aa20.85■□□□□ 0.93
TMEM53-208ENST00000476724 AMPHP49418 695 aa20.84■□□□□ 0.93
TMEM53-208ENST00000476724 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
TMEM53-208ENST00000476724 USP19O94966 1318 aa20.84■□□□□ 0.93
TMEM53-208ENST00000476724 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
TMEM53-208ENST00000476724 ZNF853P0CG23 659 aa20.83■□□□□ 0.93
TMEM53-208ENST00000476724 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms