RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 PPM1GO15355 546 aaPredicted RBP16.35■□□□□ 0.21
CDKAL1-203ENST00000476517 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
CDKAL1-203ENST00000476517 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDKAL1-203ENST00000476517 CADPS2Q86UW7 1296 aa16.35■□□□□ 0.21
CDKAL1-203ENST00000476517 U2SURPO15042 1029 aaKnown RBP16.34■□□□□ 0.21
CDKAL1-203ENST00000476517 RXRBP28702 533 aa16.34■□□□□ 0.21
CDKAL1-203ENST00000476517 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
CDKAL1-203ENST00000476517 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.21
CDKAL1-203ENST00000476517 PSME1Q06323 249 aa16.33■□□□□ 0.2
CDKAL1-203ENST00000476517 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
CDKAL1-203ENST00000476517 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
CDKAL1-203ENST00000476517 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.2
CDKAL1-203ENST00000476517 SBNO1A3KN83 1393 aa16.32■□□□□ 0.2
CDKAL1-203ENST00000476517 APAF1O14727 1248 aa16.32■□□□□ 0.2
CDKAL1-203ENST00000476517 SLIT3O75094 1523 aa16.32■□□□□ 0.2
CDKAL1-203ENST00000476517 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
CDKAL1-203ENST00000476517 NEFMP07197 916 aa16.32■□□□□ 0.2
CDKAL1-203ENST00000476517 ABTB2Q8N961 1025 aa16.32■□□□□ 0.2
CDKAL1-203ENST00000476517 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
CDKAL1-203ENST00000476517 NFAT5O94916 1531 aa16.31■□□□□ 0.2
CDKAL1-203ENST00000476517 FLT4P35916 1363 aa16.31■□□□□ 0.2
CDKAL1-203ENST00000476517 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
CDKAL1-203ENST00000476517 NLRP6P59044 892 aa16.31■□□□□ 0.2
CDKAL1-203ENST00000476517 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
CDKAL1-203ENST00000476517 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
CDKAL1-203ENST00000476517 ZNF521Q96K83 1311 aa16.29■□□□□ 0.2
CDKAL1-203ENST00000476517 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
CDKAL1-203ENST00000476517 SLAIN2Q9P270 581 aa16.29■□□□□ 0.2
CDKAL1-203ENST00000476517 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
CDKAL1-203ENST00000476517 NHSL1Q5SYE7 1610 aa16.28■□□□□ 0.2
CDKAL1-203ENST00000476517 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
CDKAL1-203ENST00000476517 FCHSD2O94868 740 aa16.27■□□□□ 0.2
CDKAL1-203ENST00000476517 IL13P35225 146 aa16.27■□□□□ 0.2
CDKAL1-203ENST00000476517 MEX3CQ5U5Q3 659 aaKnown RBP16.27■□□□□ 0.2
CDKAL1-203ENST00000476517 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
CDKAL1-203ENST00000476517 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
CDKAL1-203ENST00000476517 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
CDKAL1-203ENST00000476517 FBLN1P23142 703 aa16.26■□□□□ 0.19
CDKAL1-203ENST00000476517 CCDC27Q2M243 656 aa16.26■□□□□ 0.19
CDKAL1-203ENST00000476517 KCNH5Q8NCM2 988 aa16.26■□□□□ 0.19
CDKAL1-203ENST00000476517 SUPT16HQ9Y5B9 1047 aaKnown RBP16.26■□□□□ 0.19
CDKAL1-203ENST00000476517 SOX12O15370 315 aa16.25■□□□□ 0.19
CDKAL1-203ENST00000476517 FOXO3O43524 673 aa16.25■□□□□ 0.19
CDKAL1-203ENST00000476517 AMPHP49418 695 aa16.25■□□□□ 0.19
CDKAL1-203ENST00000476517 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
CDKAL1-203ENST00000476517 ARHGEF10O15013 1369 aa16.25■□□□□ 0.19
CDKAL1-203ENST00000476517 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
CDKAL1-203ENST00000476517 PXDNQ92626 1479 aa16.24■□□□□ 0.19
CDKAL1-203ENST00000476517 PLEKHF1Q96S99 279 aa16.24■□□□□ 0.19
CDKAL1-203ENST00000476517 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
CDKAL1-203ENST00000476517 RGS12O14924 1447 aa16.24■□□□□ 0.19
CDKAL1-203ENST00000476517 TNS3Q68CZ2 1445 aa16.24■□□□□ 0.19
CDKAL1-203ENST00000476517 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
CDKAL1-203ENST00000476517 EP400Q96L91 3159 aa16.23■□□□□ 0.19
CDKAL1-203ENST00000476517 E9PSI1 815 aa16.23■□□□□ 0.19
CDKAL1-203ENST00000476517 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
CDKAL1-203ENST00000476517 ABCC6O95255 1503 aa16.23■□□□□ 0.19
CDKAL1-203ENST00000476517 AHDC1Q5TGY3 1603 aaPredicted RBP16.23■□□□□ 0.19
CDKAL1-203ENST00000476517 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
CDKAL1-203ENST00000476517 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
CDKAL1-203ENST00000476517 EIF4A2Q14240 407 aaKnown RBP16.22■□□□□ 0.19
CDKAL1-203ENST00000476517 FKBP8Q14318 412 aa16.22■□□□□ 0.19
CDKAL1-203ENST00000476517 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
CDKAL1-203ENST00000476517 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
CDKAL1-203ENST00000476517 RGPD2P0DJD1 1756 aa16.22■□□□□ 0.19
CDKAL1-203ENST00000476517 USP19O94966 1318 aa16.21■□□□□ 0.19
CDKAL1-203ENST00000476517 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
CDKAL1-203ENST00000476517 TMPOP42166 694 aaKnown RBP16.2■□□□□ 0.18
CDKAL1-203ENST00000476517 XPCQ01831 940 aaPredicted RBP16.2■□□□□ 0.18
CDKAL1-203ENST00000476517 SLFN5Q08AF3 891 aa16.2■□□□□ 0.18
CDKAL1-203ENST00000476517 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
CDKAL1-203ENST00000476517 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
CDKAL1-203ENST00000476517 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
CDKAL1-203ENST00000476517 CAMTA1Q9Y6Y1 1673 aa16.2■□□□□ 0.18
CDKAL1-203ENST00000476517 HMOX1P09601 288 aa16.19■□□□□ 0.18
CDKAL1-203ENST00000476517 HOXC9P31274 260 aa16.19■□□□□ 0.18
CDKAL1-203ENST00000476517 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
CDKAL1-203ENST00000476517 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
CDKAL1-203ENST00000476517 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
CDKAL1-203ENST00000476517 LMOD3Q0VAK6 560 aa16.18■□□□□ 0.18
CDKAL1-203ENST00000476517 DUSP27Q5VZP5 1158 aa16.18■□□□□ 0.18
CDKAL1-203ENST00000476517 AFF2P51816 1311 aa16.18■□□□□ 0.18
CDKAL1-203ENST00000476517 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
CDKAL1-203ENST00000476517 NFE2L2Q16236 605 aa16.17■□□□□ 0.18
CDKAL1-203ENST00000476517 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
CDKAL1-203ENST00000476517 KDRP35968 1356 aa16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 RBM6P78332 1123 aaKnown RBP16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 TRMT2AQ8IZ69 625 aaKnown RBP16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 MYH16Q9H6N6 1097 aa16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 IL16Q14005 1332 aa16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 IGSF1Q8N6C5 1336 aa16.16■□□□□ 0.18
CDKAL1-203ENST00000476517 COL18A1P39060 1754 aa16.15■□□□□ 0.18
CDKAL1-203ENST00000476517 RIPK4P57078 832 aa16.15■□□□□ 0.18
CDKAL1-203ENST00000476517 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
CDKAL1-203ENST00000476517 IP6K1Q92551 441 aa16.14■□□□□ 0.17
CDKAL1-203ENST00000476517 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
CDKAL1-203ENST00000476517 GCP02774 474 aa16.13■□□□□ 0.17
CDKAL1-203ENST00000476517 RRP1P56182 461 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms