RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 TRIM27P14373 513 aa20.43■□□□□ 0.86
VARS2-207ENST00000476162 THUMPD2Q9BTF0 503 aaKnown RBP20.42■□□□□ 0.86
VARS2-207ENST00000476162 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
VARS2-207ENST00000476162 NOB1Q9ULX3 412 aaKnown RBP20.42■□□□□ 0.86
VARS2-207ENST00000476162 SLIT1O75093 1534 aa20.41■□□□□ 0.86
VARS2-207ENST00000476162 ARHGAP23Q9P227 1491 aa20.41■□□□□ 0.86
VARS2-207ENST00000476162 TBX22Q9Y458 520 aa20.41■□□□□ 0.86
VARS2-207ENST00000476162 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
VARS2-207ENST00000476162 THEMISQ8N1K5 641 aaPredicted RBP20.39■□□□□ 0.86
VARS2-207ENST00000476162 USP35Q9P2H5 1018 aa20.39■□□□□ 0.85
VARS2-207ENST00000476162 USP6P35125 1406 aa20.38■□□□□ 0.85
VARS2-207ENST00000476162 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
VARS2-207ENST00000476162 TOPAZ1Q8N9V7 1692 aa20.37■□□□□ 0.85
VARS2-207ENST00000476162 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
VARS2-207ENST00000476162 FER1L4A9Z1Z3 1794 aa20.37■□□□□ 0.85
VARS2-207ENST00000476162 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
VARS2-207ENST00000476162 ALDH1L2Q3SY69 923 aa20.36■□□□□ 0.85
VARS2-207ENST00000476162 NRKQ7Z2Y5 1582 aa20.36■□□□□ 0.85
VARS2-207ENST00000476162 ITPRIPQ8IWB1 547 aa20.36■□□□□ 0.85
VARS2-207ENST00000476162 KIF16BQ96L93 1317 aa20.36■□□□□ 0.85
VARS2-207ENST00000476162 OVOS2A0A0J9YW53 1432 aa20.35■□□□□ 0.85
VARS2-207ENST00000476162 OVOS2Q6IE36 1432 aa20.35■□□□□ 0.85
VARS2-207ENST00000476162 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
VARS2-207ENST00000476162 EIF4A2Q14240 407 aaKnown RBP20.35■□□□□ 0.85
VARS2-207ENST00000476162 IFT57Q9NWB7 429 aa20.35■□□□□ 0.85
VARS2-207ENST00000476162 DDX19BQ9UMR2 479 aa20.35■□□□□ 0.85
VARS2-207ENST00000476162 GNAI1P63096 354 aa20.34■□□□□ 0.85
VARS2-207ENST00000476162 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
VARS2-207ENST00000476162 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
VARS2-207ENST00000476162 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
VARS2-207ENST00000476162 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
VARS2-207ENST00000476162 ZNF853P0CG23 659 aa20.33■□□□□ 0.85
VARS2-207ENST00000476162 ZNF428Q96B54 188 aa20.33■□□□□ 0.85
VARS2-207ENST00000476162 VAMP4O75379 141 aa20.33■□□□□ 0.84
VARS2-207ENST00000476162 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.84
VARS2-207ENST00000476162 AEBP1Q8IUX7 1158 aa20.33■□□□□ 0.84
VARS2-207ENST00000476162 TSPYL6Q8N831 410 aa20.33■□□□□ 0.84
VARS2-207ENST00000476162 MBIPQ9NS73 344 aa20.33■□□□□ 0.84
VARS2-207ENST00000476162 FAM83GA6ND36 823 aa20.32■□□□□ 0.84
VARS2-207ENST00000476162 SOX12O15370 315 aa20.32■□□□□ 0.84
VARS2-207ENST00000476162 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
VARS2-207ENST00000476162 SSH2Q76I76 1423 aa20.32■□□□□ 0.84
VARS2-207ENST00000476162 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
VARS2-207ENST00000476162 USP31Q70CQ4 1352 aa20.3■□□□□ 0.84
VARS2-207ENST00000476162 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
VARS2-207ENST00000476162 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
VARS2-207ENST00000476162 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
VARS2-207ENST00000476162 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
VARS2-207ENST00000476162 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
VARS2-207ENST00000476162 NGDNQ8NEJ9 315 aaKnown RBP20.29■□□□□ 0.84
VARS2-207ENST00000476162 ZBTB40Q9NUA8 1239 aa20.29■□□□□ 0.84
VARS2-207ENST00000476162 TTC21AQ8NDW8 1320 aa20.28■□□□□ 0.84
VARS2-207ENST00000476162 DLG5Q8TDM6 1919 aa20.28■□□□□ 0.84
VARS2-207ENST00000476162 DIP2AQ14689 1571 aa20.28■□□□□ 0.84
VARS2-207ENST00000476162 KCNA6P17658 529 aa20.27■□□□□ 0.84
VARS2-207ENST00000476162 HDAC1Q13547 482 aaPredicted RBP20.27■□□□□ 0.84
VARS2-207ENST00000476162 MRPL50Q8N5N7 158 aaKnown RBP20.27■□□□□ 0.84
VARS2-207ENST00000476162 TWISTNBQ3B726 338 aaPredicted RBP20.26■□□□□ 0.83
VARS2-207ENST00000476162 C8orf58Q8NAV2 365 aa20.26■□□□□ 0.83
VARS2-207ENST00000476162 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
VARS2-207ENST00000476162 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
VARS2-207ENST00000476162 PKNOX2Q96KN3 472 aa20.26■□□□□ 0.83
VARS2-207ENST00000476162 BRPF3Q9ULD4 1205 aa20.26■□□□□ 0.83
VARS2-207ENST00000476162 MAP3K19Q56UN5 1328 aa20.25■□□□□ 0.83
VARS2-207ENST00000476162 SEC24BO95487 1268 aa20.25■□□□□ 0.83
VARS2-207ENST00000476162 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
VARS2-207ENST00000476162 RGPD8O14715 1765 aaPredicted RBP20.24■□□□□ 0.83
VARS2-207ENST00000476162 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
VARS2-207ENST00000476162 XRN1Q8IZH2 1706 aaKnown RBP20.23■□□□□ 0.83
VARS2-207ENST00000476162 USP19O94966 1318 aa20.23■□□□□ 0.83
VARS2-207ENST00000476162 VIRMAQ69YN4 1812 aaKnown RBP20.22■□□□□ 0.83
VARS2-207ENST00000476162 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
VARS2-207ENST00000476162 MCM10Q7L590 875 aa20.21■□□□□ 0.83
VARS2-207ENST00000476162 SMC5Q8IY18 1101 aa20.21■□□□□ 0.83
VARS2-207ENST00000476162 DAXXQ9UER7 740 aaPredicted RBP20.2■□□□□ 0.82
VARS2-207ENST00000476162 PIK3R4Q99570 1358 aa20.2■□□□□ 0.82
VARS2-207ENST00000476162 ZBTB7BO15156 539 aaPredicted RBP20.19■□□□□ 0.82
VARS2-207ENST00000476162 SBNO1A3KN83 1393 aa20.19■□□□□ 0.82
VARS2-207ENST00000476162 ANKARQ7Z5J8 1434 aa20.19■□□□□ 0.82
VARS2-207ENST00000476162 RGPD1P0DJD0 1748 aa20.19■□□□□ 0.82
VARS2-207ENST00000476162 FLT4P35916 1363 aa20.19■□□□□ 0.82
VARS2-207ENST00000476162 AMPHP49418 695 aa20.18■□□□□ 0.82
VARS2-207ENST00000476162 NLRP6P59044 892 aa20.18■□□□□ 0.82
VARS2-207ENST00000476162 CHL1O00533 1208 aa20.18■□□□□ 0.82
VARS2-207ENST00000476162 ARHGEF10O15013 1369 aa20.18■□□□□ 0.82
VARS2-207ENST00000476162 ABCC4O15439 1325 aa20.17■□□□□ 0.82
VARS2-207ENST00000476162 KRT24Q2M2I5 525 aa20.17■□□□□ 0.82
VARS2-207ENST00000476162 NUTM2GQ5VZR2 741 aa20.17■□□□□ 0.82
VARS2-207ENST00000476162 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
VARS2-207ENST00000476162 GSE1Q14687 1217 aa20.16■□□□□ 0.82
VARS2-207ENST00000476162 ANKLE2Q86XL3 938 aa20.16■□□□□ 0.82
VARS2-207ENST00000476162 EYA1Q99502 592 aa20.15■□□□□ 0.82
VARS2-207ENST00000476162 CHMP4BQ9H444 224 aaKnown RBP20.15■□□□□ 0.82
VARS2-207ENST00000476162 FOXO3O43524 673 aa20.14■□□□□ 0.81
VARS2-207ENST00000476162 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
VARS2-207ENST00000476162 API5Q9BZZ5 524 aaKnown RBP20.14■□□□□ 0.81
VARS2-207ENST00000476162 C1orf115Q9H7X2 142 aa20.14■□□□□ 0.81
VARS2-207ENST00000476162 RIMS1Q86UR5 1692 aaKnown RBP20.14■□□□□ 0.81
VARS2-207ENST00000476162 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.81
VARS2-207ENST00000476162 NUCB1Q02818 461 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms