RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
CCDC66-216ENST00000476142 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
CCDC66-216ENST00000476142 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
CCDC66-216ENST00000476142 TMEM57Q8N5G2 664 aa11.38□□□□□ -0.59
CCDC66-216ENST00000476142 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
CCDC66-216ENST00000476142 PTPRUQ92729 1446 aa11.38□□□□□ -0.59
CCDC66-216ENST00000476142 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
CCDC66-216ENST00000476142 DDX19BQ9UMR2 479 aa11.38□□□□□ -0.59
CCDC66-216ENST00000476142 DCTN1Q14203 1278 aa11.37□□□□□ -0.59
CCDC66-216ENST00000476142 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
CCDC66-216ENST00000476142 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
CCDC66-216ENST00000476142 GNAI1P63096 354 aa11.37□□□□□ -0.59
CCDC66-216ENST00000476142 ITSN1Q15811 1721 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 MON2Q7Z3U7 1717 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.36□□□□□ -0.59
CCDC66-216ENST00000476142 EIF4A2Q14240 407 aaKnown RBP11.36□□□□□ -0.59
CCDC66-216ENST00000476142 SULT6B1Q6IMI4 303 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
CCDC66-216ENST00000476142 NGDNQ8NEJ9 315 aaKnown RBP11.36□□□□□ -0.59
CCDC66-216ENST00000476142 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 PLEKHG3A1L390 1219 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 LMOD3Q0VAK6 560 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 TSPYL6Q8N831 410 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 IFT57Q9NWB7 429 aa11.36□□□□□ -0.59
CCDC66-216ENST00000476142 HSP90AB2PQ58FF8 381 aa11.35□□□□□ -0.59
CCDC66-216ENST00000476142 USP6P35125 1406 aa11.35□□□□□ -0.59
CCDC66-216ENST00000476142 C3P01024 1663 aa11.35□□□□□ -0.59
CCDC66-216ENST00000476142 TBX22Q9Y458 520 aa11.34□□□□□ -0.59
CCDC66-216ENST00000476142 AKAP12Q02952 1782 aa11.34□□□□□ -0.59
CCDC66-216ENST00000476142 VAMP4O75379 141 aa11.33□□□□□ -0.59
CCDC66-216ENST00000476142 SEC24BO95487 1268 aa11.33□□□□□ -0.59
CCDC66-216ENST00000476142 TWISTNBQ3B726 338 aaPredicted RBP11.33□□□□□ -0.59
CCDC66-216ENST00000476142 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
CCDC66-216ENST00000476142 OVOS2A0A0J9YW53 1432 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 OVOS2Q6IE36 1432 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
CCDC66-216ENST00000476142 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 MCM10Q7L590 875 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 ZNF428Q96B54 188 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
CCDC66-216ENST00000476142 SLIT1O75093 1534 aa11.31□□□□□ -0.6
CCDC66-216ENST00000476142 KCNA6P17658 529 aa11.31□□□□□ -0.6
CCDC66-216ENST00000476142 HDAC1Q13547 482 aaPredicted RBP11.31□□□□□ -0.6
CCDC66-216ENST00000476142 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
CCDC66-216ENST00000476142 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
CCDC66-216ENST00000476142 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
CCDC66-216ENST00000476142 AMPHP49418 695 aa11.3□□□□□ -0.6
CCDC66-216ENST00000476142 MAP3K19Q56UN5 1328 aa11.3□□□□□ -0.6
CCDC66-216ENST00000476142 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
CCDC66-216ENST00000476142 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
CCDC66-216ENST00000476142 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
CCDC66-216ENST00000476142 TOPAZ1Q8N9V7 1692 aa11.29□□□□□ -0.6
CCDC66-216ENST00000476142 PTCH1Q13635 1447 aa11.29□□□□□ -0.6
CCDC66-216ENST00000476142 NRKQ7Z2Y5 1582 aa11.29□□□□□ -0.6
CCDC66-216ENST00000476142 TTC21AQ8NDW8 1320 aa11.29□□□□□ -0.6
CCDC66-216ENST00000476142 NLRP6P59044 892 aa11.29□□□□□ -0.6
CCDC66-216ENST00000476142 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
CCDC66-216ENST00000476142 DIP2AQ14689 1571 aa11.28□□□□□ -0.6
CCDC66-216ENST00000476142 KRT24Q2M2I5 525 aa11.28□□□□□ -0.6
CCDC66-216ENST00000476142 USP19O94966 1318 aa11.28□□□□□ -0.6
CCDC66-216ENST00000476142 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
CCDC66-216ENST00000476142 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
CCDC66-216ENST00000476142 FOXO3O43524 673 aa11.27□□□□□ -0.61
CCDC66-216ENST00000476142 ARHGAP45Q92619 1136 aa11.27□□□□□ -0.61
CCDC66-216ENST00000476142 LNPKQ9C0E8 428 aa11.27□□□□□ -0.61
CCDC66-216ENST00000476142 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
CCDC66-216ENST00000476142 SSH2Q76I76 1423 aa11.27□□□□□ -0.61
CCDC66-216ENST00000476142 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
CCDC66-216ENST00000476142 SMC5Q8IY18 1101 aa11.27□□□□□ -0.61
CCDC66-216ENST00000476142 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
CCDC66-216ENST00000476142 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
CCDC66-216ENST00000476142 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
CCDC66-216ENST00000476142 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
CCDC66-216ENST00000476142 FLT4P35916 1363 aa11.26□□□□□ -0.61
CCDC66-216ENST00000476142 LTV1Q96GA3 475 aaPredicted RBP11.26□□□□□ -0.61
CCDC66-216ENST00000476142 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
CCDC66-216ENST00000476142 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
CCDC66-216ENST00000476142 ABTB2Q8N961 1025 aa11.25□□□□□ -0.61
CCDC66-216ENST00000476142 FBXO41Q8TF61 875 aa11.25□□□□□ -0.61
CCDC66-216ENST00000476142 SBNO1A3KN83 1393 aa11.25□□□□□ -0.61
CCDC66-216ENST00000476142 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
CCDC66-216ENST00000476142 ABCC4O15439 1325 aa11.25□□□□□ -0.61
CCDC66-216ENST00000476142 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
CCDC66-216ENST00000476142 ANKRD45Q5TZF3 282 aa11.25□□□□□ -0.61
CCDC66-216ENST00000476142 ARHGEF10O15013 1369 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 NUCB1Q02818 461 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 EYA1Q99502 592 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 ZBTB7CA1YPR0 619 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 CHL1O00533 1208 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 CHD1LQ86WJ1 897 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
CCDC66-216ENST00000476142 PIK3R4Q99570 1358 aa11.23□□□□□ -0.61
CCDC66-216ENST00000476142 BECN1Q14457 450 aa11.23□□□□□ -0.61
CCDC66-216ENST00000476142 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
CCDC66-216ENST00000476142 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
CCDC66-216ENST00000476142 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms