RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 MON2Q7Z3U7 1717 aa21.26■□□□□ 0.99
TVP23B-202ENST00000476139 AEBP1Q8IUX7 1158 aa21.26■□□□□ 0.99
TVP23B-202ENST00000476139 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
TVP23B-202ENST00000476139 DCTN1Q14203 1278 aa21.26■□□□□ 0.99
TVP23B-202ENST00000476139 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
TVP23B-202ENST00000476139 AAMPQ13685 434 aa21.25■□□□□ 0.99
TVP23B-202ENST00000476139 TBX22Q9Y458 520 aa21.25■□□□□ 0.99
TVP23B-202ENST00000476139 C3P01024 1663 aa21.25■□□□□ 0.99
TVP23B-202ENST00000476139 EIF4A2Q14240 407 aaKnown RBP21.24■□□□□ 0.99
TVP23B-202ENST00000476139 HSP90AB2PQ58FF8 381 aa21.24■□□□□ 0.99
TVP23B-202ENST00000476139 TMEM57Q8N5G2 664 aa21.24■□□□□ 0.99
TVP23B-202ENST00000476139 RWDD1Q9H446 243 aaPredicted RBP21.23■□□□□ 0.99
TVP23B-202ENST00000476139 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
TVP23B-202ENST00000476139 MBIPQ9NS73 344 aa21.23■□□□□ 0.99
TVP23B-202ENST00000476139 PDZRN3Q9UPQ7 1066 aa21.23■□□□□ 0.99
TVP23B-202ENST00000476139 AKAP12Q02952 1782 aa21.23■□□□□ 0.99
TVP23B-202ENST00000476139 USP6P35125 1406 aa21.22■□□□□ 0.99
TVP23B-202ENST00000476139 VAMP4O75379 141 aa21.22■□□□□ 0.99
TVP23B-202ENST00000476139 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
TVP23B-202ENST00000476139 ARHGAP23Q9P227 1491 aa21.21■□□□□ 0.99
TVP23B-202ENST00000476139 SLIT1O75093 1534 aa21.2■□□□□ 0.98
TVP23B-202ENST00000476139 SEC24BO95487 1268 aa21.2■□□□□ 0.98
TVP23B-202ENST00000476139 ZNF853P0CG23 659 aa21.2■□□□□ 0.98
TVP23B-202ENST00000476139 DDX19BQ9UMR2 479 aa21.2■□□□□ 0.98
TVP23B-202ENST00000476139 ALDH1L2Q3SY69 923 aa21.19■□□□□ 0.98
TVP23B-202ENST00000476139 IFT57Q9NWB7 429 aa21.19■□□□□ 0.98
TVP23B-202ENST00000476139 KCNA6P17658 529 aa21.19■□□□□ 0.98
TVP23B-202ENST00000476139 GNAI1P63096 354 aa21.19■□□□□ 0.98
TVP23B-202ENST00000476139 NGDNQ8NEJ9 315 aaKnown RBP21.19■□□□□ 0.98
TVP23B-202ENST00000476139 KIF16BQ96L93 1317 aa21.18■□□□□ 0.98
TVP23B-202ENST00000476139 IPO8O15397 1037 aaKnown RBP21.18■□□□□ 0.98
TVP23B-202ENST00000476139 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
TVP23B-202ENST00000476139 DAXXQ9UER7 740 aaPredicted RBP21.18■□□□□ 0.98
TVP23B-202ENST00000476139 OVOS2A0A0J9YW53 1432 aa21.18■□□□□ 0.98
TVP23B-202ENST00000476139 OVOS2Q6IE36 1432 aa21.18■□□□□ 0.98
TVP23B-202ENST00000476139 C8orf58Q8NAV2 365 aa21.18■□□□□ 0.98
TVP23B-202ENST00000476139 CALD1Q05682 793 aaKnown RBP21.17■□□□□ 0.98
TVP23B-202ENST00000476139 CFAP44Q96MT7 982 aa21.17■□□□□ 0.98
TVP23B-202ENST00000476139 ZBTB40Q9NUA8 1239 aa21.16■□□□□ 0.98
TVP23B-202ENST00000476139 RBM33Q96EV2 1170 aaKnown RBP21.15■□□□□ 0.98
TVP23B-202ENST00000476139 FER1L4A9Z1Z3 1794 aa21.15■□□□□ 0.98
TVP23B-202ENST00000476139 SSH2Q76I76 1423 aa21.15■□□□□ 0.98
TVP23B-202ENST00000476139 TWISTNBQ3B726 338 aaPredicted RBP21.15■□□□□ 0.98
TVP23B-202ENST00000476139 MRPL50Q8N5N7 158 aaKnown RBP21.15■□□□□ 0.98
TVP23B-202ENST00000476139 MAP3K19Q56UN5 1328 aa21.14■□□□□ 0.97
TVP23B-202ENST00000476139 TOPAZ1Q8N9V7 1692 aa21.14■□□□□ 0.97
TVP23B-202ENST00000476139 NUTM2GQ5VZR2 741 aa21.14■□□□□ 0.97
TVP23B-202ENST00000476139 MCM10Q7L590 875 aa21.14■□□□□ 0.97
TVP23B-202ENST00000476139 NRKQ7Z2Y5 1582 aa21.14■□□□□ 0.97
TVP23B-202ENST00000476139 LMOD3Q0VAK6 560 aa21.13■□□□□ 0.97
TVP23B-202ENST00000476139 USP31Q70CQ4 1352 aa21.12■□□□□ 0.97
TVP23B-202ENST00000476139 KRT24Q2M2I5 525 aa21.12■□□□□ 0.97
TVP23B-202ENST00000476139 ZNF428Q96B54 188 aa21.12■□□□□ 0.97
TVP23B-202ENST00000476139 USP19O94966 1318 aa21.12■□□□□ 0.97
TVP23B-202ENST00000476139 PTCH1Q13635 1447 aa21.12■□□□□ 0.97
TVP23B-202ENST00000476139 BRPF1P55201 1214 aaPredicted RBP21.12■□□□□ 0.97
TVP23B-202ENST00000476139 HDAC1Q13547 482 aaPredicted RBP21.12■□□□□ 0.97
TVP23B-202ENST00000476139 DLG5Q8TDM6 1919 aa21.1■□□□□ 0.97
TVP23B-202ENST00000476139 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
TVP23B-202ENST00000476139 RGPD8O14715 1765 aaPredicted RBP21.09■□□□□ 0.97
TVP23B-202ENST00000476139 TTC21AQ8NDW8 1320 aa21.09■□□□□ 0.97
TVP23B-202ENST00000476139 FOXO3O43524 673 aa21.09■□□□□ 0.97
TVP23B-202ENST00000476139 NLRP6P59044 892 aa21.09■□□□□ 0.97
TVP23B-202ENST00000476139 DIP2AQ14689 1571 aa21.08■□□□□ 0.97
TVP23B-202ENST00000476139 ZBTB7BO15156 539 aaPredicted RBP21.08■□□□□ 0.97
TVP23B-202ENST00000476139 C1orf115Q9H7X2 142 aa21.08■□□□□ 0.97
TVP23B-202ENST00000476139 AMPHP49418 695 aa21.07■□□□□ 0.96
TVP23B-202ENST00000476139 MIS18AQ9NYP9 233 aa21.06■□□□□ 0.96
TVP23B-202ENST00000476139 SMC5Q8IY18 1101 aa21.06■□□□□ 0.96
TVP23B-202ENST00000476139 ARHGAP45Q92619 1136 aa21.06■□□□□ 0.96
TVP23B-202ENST00000476139 NFKBIBQ15653 356 aa21.05■□□□□ 0.96
TVP23B-202ENST00000476139 EYA1Q99502 592 aa21.05■□□□□ 0.96
TVP23B-202ENST00000476139 MTHFSDQ2M296 383 aaKnown RBP21.04■□□□□ 0.96
TVP23B-202ENST00000476139 CHL1O00533 1208 aa21.03■□□□□ 0.96
TVP23B-202ENST00000476139 ABTB2Q8N961 1025 aa21.03■□□□□ 0.96
TVP23B-202ENST00000476139 NALCNQ8IZF0 1738 aa21.02■□□□□ 0.96
TVP23B-202ENST00000476139 FLT4P35916 1363 aa21.02■□□□□ 0.96
TVP23B-202ENST00000476139 ANKLE2Q86XL3 938 aa21.02■□□□□ 0.96
TVP23B-202ENST00000476139 SBNO1A3KN83 1393 aa21.01■□□□□ 0.95
TVP23B-202ENST00000476139 C14orf37Q86TY3 774 aa21.01■□□□□ 0.95
TVP23B-202ENST00000476139 LNPKQ9C0E8 428 aa21.01■□□□□ 0.95
TVP23B-202ENST00000476139 ABCC4O15439 1325 aa21.01■□□□□ 0.95
TVP23B-202ENST00000476139 CEP170BQ9Y4F5 1589 aaPredicted RBP21■□□□□ 0.95
TVP23B-202ENST00000476139 XRN1Q8IZH2 1706 aaKnown RBP21■□□□□ 0.95
TVP23B-202ENST00000476139 USP35Q9P2H5 1018 aa21■□□□□ 0.95
TVP23B-202ENST00000476139 SIRT2Q8IXJ6 389 aa20.99■□□□□ 0.95
TVP23B-202ENST00000476139 LTV1Q96GA3 475 aaPredicted RBP20.99■□□□□ 0.95
TVP23B-202ENST00000476139 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
TVP23B-202ENST00000476139 NUCB1Q02818 461 aa20.98■□□□□ 0.95
TVP23B-202ENST00000476139 ARHGEF10O15013 1369 aa20.97■□□□□ 0.95
TVP23B-202ENST00000476139 PIK3C2AO00443 1686 aa20.97■□□□□ 0.95
TVP23B-202ENST00000476139 RGPD1P0DJD0 1748 aa20.97■□□□□ 0.95
TVP23B-202ENST00000476139 HOXC9P31274 260 aa20.97■□□□□ 0.95
TVP23B-202ENST00000476139 IGSF1Q8N6C5 1336 aa20.96■□□□□ 0.95
TVP23B-202ENST00000476139 FRAT2O75474 233 aaPredicted RBP20.96■□□□□ 0.95
TVP23B-202ENST00000476139 RTF1Q92541 710 aaKnown RBP20.96■□□□□ 0.95
TVP23B-202ENST00000476139 API5Q9BZZ5 524 aaKnown RBP20.96■□□□□ 0.95
TVP23B-202ENST00000476139 CRB1P82279 1406 aa20.96■□□□□ 0.95
TVP23B-202ENST00000476139 ANKARQ7Z5J8 1434 aa20.96■□□□□ 0.95
TVP23B-202ENST00000476139 VIRMAQ69YN4 1812 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms