RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PNPLA6Q8IY17 1366 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 ABCC11Q96J66 1382 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 PPLO60437 1756 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 PPP2R1AP30153 589 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 DEKP35659 375 aaKnown RBP9.02□□□□□ -0.97
UBR4-212ENST00000475973 ANP32AP39687 249 aaKnown RBP9.02□□□□□ -0.97
UBR4-212ENST00000475973 PSEN1P49768 467 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 STK26Q9P289 416 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 SETD1AO15047 1707 aaKnown RBP9.02□□□□□ -0.97
UBR4-212ENST00000475973 NPHP3Q7Z494 1330 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
UBR4-212ENST00000475973 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
UBR4-212ENST00000475973 IFT172Q9UG01 1749 aa9.01□□□□□ -0.97
UBR4-212ENST00000475973 YTHDC2Q9H6S0 1430 aaKnown RBP9□□□□□ -0.97
UBR4-212ENST00000475973 SLFN5Q08AF3 891 aa9□□□□□ -0.97
UBR4-212ENST00000475973 CDCA8Q53HL2 280 aa9□□□□□ -0.97
UBR4-212ENST00000475973 ESCO1Q5FWF5 840 aa9□□□□□ -0.97
UBR4-212ENST00000475973 DDX17Q92841 729 aaKnown RBP9□□□□□ -0.97
UBR4-212ENST00000475973 ADAMTS8Q9UP79 889 aa9□□□□□ -0.97
UBR4-212ENST00000475973 SOS2Q07890 1332 aaPredicted RBP9□□□□□ -0.97
UBR4-212ENST00000475973 EIF3AQ14152 1382 aaKnown RBP8.99□□□□□ -0.97
UBR4-212ENST00000475973 C8orf37Q96NL8 207 aa8.99□□□□□ -0.97
UBR4-212ENST00000475973 ORAI2Q96SN7 254 aa8.99□□□□□ -0.97
UBR4-212ENST00000475973 AFF2P51816 1311 aa8.99□□□□□ -0.97
UBR4-212ENST00000475973 POLR3AO14802 1390 aaPredicted RBP8.99□□□□□ -0.97
UBR4-212ENST00000475973 RXRBP28702 533 aa8.98□□□□□ -0.97
UBR4-212ENST00000475973 TMEM132EQ6IEE7 984 aa8.98□□□□□ -0.97
UBR4-212ENST00000475973 CHRDL2Q6WN34 429 aa8.98□□□□□ -0.97
UBR4-212ENST00000475973 CENPQQ7L2Z9 268 aaPredicted RBP8.98□□□□□ -0.97
UBR4-212ENST00000475973 PIP4P2Q8N4L2 257 aa8.98□□□□□ -0.97
UBR4-212ENST00000475973 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
UBR4-212ENST00000475973 PUS7Q96PZ0 661 aaKnown RBP8.98□□□□□ -0.97
UBR4-212ENST00000475973 CRBNQ96SW2 442 aa8.98□□□□□ -0.97
UBR4-212ENST00000475973 C14orf93Q9H972 538 aaKnown RBP8.98□□□□□ -0.97
UBR4-212ENST00000475973 CDK12Q9NYV4 1490 aaPredicted RBP8.97□□□□□ -0.97
UBR4-212ENST00000475973 WAPLQ7Z5K2 1190 aa8.97□□□□□ -0.97
UBR4-212ENST00000475973 IFNL1Q8IU54 200 aa8.97□□□□□ -0.97
UBR4-212ENST00000475973 KIF12Q96FN5 646 aa8.97□□□□□ -0.97
UBR4-212ENST00000475973 MFRPQ9BY79 579 aa8.97□□□□□ -0.97
UBR4-212ENST00000475973 USP32Q8NFA0 1604 aa8.97□□□□□ -0.97
UBR4-212ENST00000475973 KNDC1Q76NI1 1749 aa8.97□□□□□ -0.97
UBR4-212ENST00000475973 NUTM2FA1L443 756 aa8.96□□□□□ -0.98
UBR4-212ENST00000475973 MAP3K13O43283 966 aa8.96□□□□□ -0.98
UBR4-212ENST00000475973 ADAMTS2O95450 1211 aa8.96□□□□□ -0.98
UBR4-212ENST00000475973 CFAP70Q5T0N1 1121 aa8.96□□□□□ -0.98
UBR4-212ENST00000475973 POLR3GLQ9BT43 218 aa8.96□□□□□ -0.98
UBR4-212ENST00000475973 POGKQ9P215 609 aa8.96□□□□□ -0.98
UBR4-212ENST00000475973 NINLQ9Y2I6 1382 aa8.96□□□□□ -0.98
UBR4-212ENST00000475973 DLC1Q96QB1 1528 aa8.95□□□□□ -0.98
UBR4-212ENST00000475973 PPM1GO15355 546 aaPredicted RBP8.95□□□□□ -0.98
UBR4-212ENST00000475973 FOXO3O43524 673 aa8.95□□□□□ -0.98
UBR4-212ENST00000475973 GOLGA2Q08379 1002 aa8.95□□□□□ -0.98
UBR4-212ENST00000475973 NGLY1Q96IV0 654 aa8.95□□□□□ -0.98
UBR4-212ENST00000475973 PRAM1Q96QH2 718 aa8.95□□□□□ -0.98
UBR4-212ENST00000475973 PXDNQ92626 1479 aa8.95□□□□□ -0.98
UBR4-212ENST00000475973 ADGRB1O14514 1584 aa8.95□□□□□ -0.98
UBR4-212ENST00000475973 RBM6P78332 1123 aaKnown RBP8.94□□□□□ -0.98
UBR4-212ENST00000475973 AAMPQ13685 434 aa8.94□□□□□ -0.98
UBR4-212ENST00000475973 C8orf34Q49A92 452 aa8.94□□□□□ -0.98
UBR4-212ENST00000475973 CC2D1BQ5T0F9 858 aaKnown RBP8.94□□□□□ -0.98
UBR4-212ENST00000475973 C20orf194Q5TEA3 1177 aa8.94□□□□□ -0.98
UBR4-212ENST00000475973 ANKARQ7Z5J8 1434 aa8.94□□□□□ -0.98
UBR4-212ENST00000475973 XPCQ01831 940 aaPredicted RBP8.93□□□□□ -0.98
UBR4-212ENST00000475973 SAFB2Q14151 953 aaKnown RBP eCLIP8.93□□□□□ -0.98
UBR4-212ENST00000475973 PDE3AQ14432 1141 aa8.93□□□□□ -0.98
UBR4-212ENST00000475973 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
UBR4-212ENST00000475973 CARD14Q9BXL6 1004 aa8.93□□□□□ -0.98
UBR4-212ENST00000475973 QTRT2Q9H974 415 aaKnown RBP8.93□□□□□ -0.98
UBR4-212ENST00000475973 USP21Q9UK80 565 aa8.93□□□□□ -0.98
UBR4-212ENST00000475973 TRPC5Q9UL62 973 aaPredicted RBP8.93□□□□□ -0.98
UBR4-212ENST00000475973 PHF8Q9UPP1 1060 aa8.93□□□□□ -0.98
UBR4-212ENST00000475973 KNSTRNQ9Y448 316 aa8.93□□□□□ -0.98
UBR4-212ENST00000475973 KIF1AQ12756 1690 aa8.93□□□□□ -0.98
UBR4-212ENST00000475973 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
UBR4-212ENST00000475973 RGS12O14924 1447 aa8.92□□□□□ -0.98
UBR4-212ENST00000475973 TNS3Q68CZ2 1445 aa8.92□□□□□ -0.98
UBR4-212ENST00000475973 USP19O94966 1318 aa8.92□□□□□ -0.98
UBR4-212ENST00000475973 PLIN1O60240 522 aa8.92□□□□□ -0.98
UBR4-212ENST00000475973 PSME1Q06323 249 aa8.92□□□□□ -0.98
UBR4-212ENST00000475973 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
UBR4-212ENST00000475973 ADGRB2O60241 1585 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 ARHGEF10O15013 1369 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 SPATA31A3Q5VYP0 1347 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 E9PSI1 815 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 SOX12O15370 315 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 CCDC27Q2M243 656 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 FAM161AQ3B820 660 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 FNBP4Q8N3X1 1017 aaPredicted RBP8.91□□□□□ -0.98
UBR4-212ENST00000475973 EFCAB3Q8N7B9 438 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.91□□□□□ -0.98
UBR4-212ENST00000475973 TRAK1Q9UPV9 953 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 FMN2Q9NZ56 1722 aa8.91□□□□□ -0.98
UBR4-212ENST00000475973 SBNO1A3KN83 1393 aa8.9□□□□□ -0.98
UBR4-212ENST00000475973 KRT28Q7Z3Y7 464 aa8.9□□□□□ -0.98
UBR4-212ENST00000475973 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
UBR4-212ENST00000475973 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
UBR4-212ENST00000475973 ATRNO75882 1429 aa8.89□□□□□ -0.99
UBR4-212ENST00000475973 ATAD2Q6PL18 1390 aa8.89□□□□□ -0.99
UBR4-212ENST00000475973 MINK1Q8N4C8 1332 aaPredicted RBP8.89□□□□□ -0.99
UBR4-212ENST00000475973 PPP1R37O75864 691 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms