RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
MRPL55-227ENST00000475832 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
MRPL55-227ENST00000475832 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
MRPL55-227ENST00000475832 BLMP54132 1417 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-227ENST00000475832 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
MRPL55-227ENST00000475832 POLKQ9UBT6 870 aa16.22■□□□□ 0.19
MRPL55-227ENST00000475832 YY1P25490 414 aa16.21■□□□□ 0.19
MRPL55-227ENST00000475832 CABLES1Q8TDN4 633 aa16.21■□□□□ 0.19
MRPL55-227ENST00000475832 ATRNO75882 1429 aa16.2■□□□□ 0.18
MRPL55-227ENST00000475832 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
MRPL55-227ENST00000475832 LMOD2Q6P5Q4 547 aa16.2■□□□□ 0.18
MRPL55-227ENST00000475832 KCNH5Q8NCM2 988 aa16.2■□□□□ 0.18
MRPL55-227ENST00000475832 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
MRPL55-227ENST00000475832 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-227ENST00000475832 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
MRPL55-227ENST00000475832 U2AF1L5P0DN76 240 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-227ENST00000475832 U2AF1Q01081 240 aaKnown RBP eCLIP16.19■□□□□ 0.18
MRPL55-227ENST00000475832 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
MRPL55-227ENST00000475832 SLIT2O94813 1529 aa16.19■□□□□ 0.18
MRPL55-227ENST00000475832 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
MRPL55-227ENST00000475832 NEFMP07197 916 aa16.18■□□□□ 0.18
MRPL55-227ENST00000475832 SOX12O15370 315 aa16.17■□□□□ 0.18
MRPL55-227ENST00000475832 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
MRPL55-227ENST00000475832 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
MRPL55-227ENST00000475832 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
MRPL55-227ENST00000475832 EMILIN1Q9Y6C2 1016 aa16.17■□□□□ 0.18
MRPL55-227ENST00000475832 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
MRPL55-227ENST00000475832 AMPHP49418 695 aa16.16■□□□□ 0.18
MRPL55-227ENST00000475832 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
MRPL55-227ENST00000475832 USP19O94966 1318 aa16.16■□□□□ 0.18
MRPL55-227ENST00000475832 PIK3C2AO00443 1686 aa16.15■□□□□ 0.18
MRPL55-227ENST00000475832 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
MRPL55-227ENST00000475832 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
MRPL55-227ENST00000475832 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
MRPL55-227ENST00000475832 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
MRPL55-227ENST00000475832 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-227ENST00000475832 MAPK8IP3Q9UPT6 1336 aa16.14■□□□□ 0.17
MRPL55-227ENST00000475832 FLT4P35916 1363 aa16.13■□□□□ 0.17
MRPL55-227ENST00000475832 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
MRPL55-227ENST00000475832 FBLN1P23142 703 aa16.13■□□□□ 0.17
MRPL55-227ENST00000475832 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
MRPL55-227ENST00000475832 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
MRPL55-227ENST00000475832 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
MRPL55-227ENST00000475832 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
MRPL55-227ENST00000475832 MAP3K19Q56UN5 1328 aa16.12■□□□□ 0.17
MRPL55-227ENST00000475832 RTL1A6NKG5 1358 aa16.12■□□□□ 0.17
MRPL55-227ENST00000475832 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
MRPL55-227ENST00000475832 FCHSD2O94868 740 aa16.11■□□□□ 0.17
MRPL55-227ENST00000475832 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
MRPL55-227ENST00000475832 PLCH1Q4KWH8 1693 aa16.11■□□□□ 0.17
MRPL55-227ENST00000475832 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
MRPL55-227ENST00000475832 IL13P35225 146 aa16.1■□□□□ 0.17
MRPL55-227ENST00000475832 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-227ENST00000475832 CPDO75976 1380 aa16.1■□□□□ 0.17
MRPL55-227ENST00000475832 SLIT3O75094 1523 aa16.09■□□□□ 0.17
MRPL55-227ENST00000475832 APAF1O14727 1248 aa16.09■□□□□ 0.17
MRPL55-227ENST00000475832 GCP02774 474 aa16.09■□□□□ 0.17
MRPL55-227ENST00000475832 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
MRPL55-227ENST00000475832 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
MRPL55-227ENST00000475832 MAP2P11137 1827 aaKnown RBP16.08■□□□□ 0.17
MRPL55-227ENST00000475832 BAG6P46379 1132 aa16.08■□□□□ 0.16
MRPL55-227ENST00000475832 ZBTB7CA1YPR0 619 aa16.07■□□□□ 0.16
MRPL55-227ENST00000475832 HOXC9P31274 260 aa16.07■□□□□ 0.16
MRPL55-227ENST00000475832 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
MRPL55-227ENST00000475832 VPS72Q15906 364 aa16.07■□□□□ 0.16
MRPL55-227ENST00000475832 HSP90AB2PQ58FF8 381 aa16.07■□□□□ 0.16
MRPL55-227ENST00000475832 PRDM11Q9NQV5 511 aa16.07■□□□□ 0.16
MRPL55-227ENST00000475832 NRAPQ86VF7 1730 aa16.07■□□□□ 0.16
MRPL55-227ENST00000475832 TCP11L2Q8N4U5 519 aa16.06■□□□□ 0.16
MRPL55-227ENST00000475832 IP6K1Q92551 441 aa16.06■□□□□ 0.16
MRPL55-227ENST00000475832 BTG4Q9NY30 223 aa16.06■□□□□ 0.16
MRPL55-227ENST00000475832 ZC3H6P61129 1189 aaKnown RBP16.05■□□□□ 0.16
MRPL55-227ENST00000475832 GLI3P10071 1580 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 NFAT5O94916 1531 aa16.04■□□□□ 0.16
MRPL55-227ENST00000475832 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-227ENST00000475832 HMOX1P09601 288 aa16.03■□□□□ 0.16
MRPL55-227ENST00000475832 R3HDM1Q15032 1099 aaKnown RBP16.03■□□□□ 0.16
MRPL55-227ENST00000475832 CHRNA2Q15822 529 aa16.03■□□□□ 0.16
MRPL55-227ENST00000475832 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
MRPL55-227ENST00000475832 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
MRPL55-227ENST00000475832 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
MRPL55-227ENST00000475832 CCDC27Q2M243 656 aa16.02■□□□□ 0.16
MRPL55-227ENST00000475832 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.16
MRPL55-227ENST00000475832 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.15
MRPL55-227ENST00000475832 LMOD3Q0VAK6 560 aa16.01■□□□□ 0.15
MRPL55-227ENST00000475832 SULT6B1Q6IMI4 303 aa16.01■□□□□ 0.15
MRPL55-227ENST00000475832 KRT27Q7Z3Y8 459 aa16.01■□□□□ 0.15
MRPL55-227ENST00000475832 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
MRPL55-227ENST00000475832 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
MRPL55-227ENST00000475832 PEAK1Q9H792 1746 aa16■□□□□ 0.15
MRPL55-227ENST00000475832 NEFLP07196 543 aa16■□□□□ 0.15
MRPL55-227ENST00000475832 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
MRPL55-227ENST00000475832 LTV1Q96GA3 475 aaPredicted RBP16■□□□□ 0.15
MRPL55-227ENST00000475832 E9PSI1 815 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms