RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 SULT6B1Q6IMI4 303 aa23.69■■□□□ 1.38
SEC61A2-213ENST00000475268 FRAT1Q92837 279 aaPredicted RBP23.69■■□□□ 1.38
SEC61A2-213ENST00000475268 EXOSC9Q06265 439 aaKnown RBP23.68■■□□□ 1.38
SEC61A2-213ENST00000475268 AEBP1Q8IUX7 1158 aa23.68■■□□□ 1.38
SEC61A2-213ENST00000475268 AMPHP49418 695 aa23.68■■□□□ 1.38
SEC61A2-213ENST00000475268 BCL2L13Q9BXK5 485 aa23.68■■□□□ 1.38
SEC61A2-213ENST00000475268 SBNO1A3KN83 1393 aa23.67■■□□□ 1.38
SEC61A2-213ENST00000475268 FLT4P35916 1363 aa23.67■■□□□ 1.38
SEC61A2-213ENST00000475268 PSME1Q06323 249 aa23.67■■□□□ 1.38
SEC61A2-213ENST00000475268 CT47B1P0C2W7 299 aaPredicted RBP23.65■■□□□ 1.38
SEC61A2-213ENST00000475268 PDE3AQ14432 1141 aa23.65■■□□□ 1.38
SEC61A2-213ENST00000475268 THUMPD2Q9BTF0 503 aaKnown RBP23.65■■□□□ 1.38
SEC61A2-213ENST00000475268 RBM19Q9Y4C8 960 aaKnown RBP23.64■■□□□ 1.38
SEC61A2-213ENST00000475268 LAS1LQ9Y4W2 734 aaKnown RBP23.64■■□□□ 1.38
SEC61A2-213ENST00000475268 ORAI2Q96SN7 254 aa23.64■■□□□ 1.37
SEC61A2-213ENST00000475268 HSPA2P54652 639 aa23.62■■□□□ 1.37
SEC61A2-213ENST00000475268 CALD1Q05682 793 aaKnown RBP23.62■■□□□ 1.37
SEC61A2-213ENST00000475268 MARF1Q9Y4F3 1742 aaKnown RBP23.62■■□□□ 1.37
SEC61A2-213ENST00000475268 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
SEC61A2-213ENST00000475268 PANK1Q8TE04 598 aa23.62■■□□□ 1.37
SEC61A2-213ENST00000475268 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
SEC61A2-213ENST00000475268 USP54Q70EL1 1684 aa23.6■■□□□ 1.37
SEC61A2-213ENST00000475268 FOXO3O43524 673 aa23.59■■□□□ 1.37
SEC61A2-213ENST00000475268 C19orf44Q9H6X5 657 aa23.59■■□□□ 1.37
SEC61A2-213ENST00000475268 ARHGEF10O15013 1369 aa23.59■■□□□ 1.37
SEC61A2-213ENST00000475268 DLG5Q8TDM6 1919 aa23.58■■□□□ 1.37
SEC61A2-213ENST00000475268 FAM83GA6ND36 823 aa23.58■■□□□ 1.37
SEC61A2-213ENST00000475268 COG6Q9Y2V7 657 aa23.58■■□□□ 1.37
SEC61A2-213ENST00000475268 HOXC9P31274 260 aa23.58■■□□□ 1.36
SEC61A2-213ENST00000475268 SMC4Q9NTJ3 1288 aa23.58■■□□□ 1.36
SEC61A2-213ENST00000475268 XPCQ01831 940 aaPredicted RBP23.57■■□□□ 1.36
SEC61A2-213ENST00000475268 GNAI1P63096 354 aa23.57■■□□□ 1.36
SEC61A2-213ENST00000475268 IFT57Q9NWB7 429 aa23.57■■□□□ 1.36
SEC61A2-213ENST00000475268 DCTN1Q14203 1278 aa23.56■■□□□ 1.36
SEC61A2-213ENST00000475268 SSH1Q8WYL5 1049 aa23.56■■□□□ 1.36
SEC61A2-213ENST00000475268 TNNQ9UQP3 1299 aa23.56■■□□□ 1.36
SEC61A2-213ENST00000475268 KIF24Q5T7B8 1368 aa23.56■■□□□ 1.36
SEC61A2-213ENST00000475268 EYA1Q99502 592 aa23.55■■□□□ 1.36
SEC61A2-213ENST00000475268 TMEM94Q12767 1356 aa23.54■■□□□ 1.36
SEC61A2-213ENST00000475268 RLBP1P12271 317 aa23.54■■□□□ 1.36
SEC61A2-213ENST00000475268 ZKSCAN2Q63HK3 967 aa23.54■■□□□ 1.36
SEC61A2-213ENST00000475268 CLUAP1Q96AJ1 413 aa23.54■■□□□ 1.36
SEC61A2-213ENST00000475268 IGSF1Q8N6C5 1336 aa23.53■■□□□ 1.36
SEC61A2-213ENST00000475268 ZNF853P0CG23 659 aa23.53■■□□□ 1.36
SEC61A2-213ENST00000475268 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
SEC61A2-213ENST00000475268 KDM2BQ8NHM5 1336 aa23.53■■□□□ 1.36
SEC61A2-213ENST00000475268 C1orf167Q5SNV9 1468 aa23.53■■□□□ 1.36
SEC61A2-213ENST00000475268 KDM4FA0A1W2PPD8 638 aa23.52■■□□□ 1.36
SEC61A2-213ENST00000475268 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
SEC61A2-213ENST00000475268 ATF3P18847 181 aa23.52■■□□□ 1.36
SEC61A2-213ENST00000475268 LTV1Q96GA3 475 aaPredicted RBP23.52■■□□□ 1.36
SEC61A2-213ENST00000475268 KDRP35968 1356 aa23.52■■□□□ 1.35
SEC61A2-213ENST00000475268 CENPQQ7L2Z9 268 aaPredicted RBP23.51■■□□□ 1.35
SEC61A2-213ENST00000475268 STRCP1A6NGW2 1772 aa23.51■■□□□ 1.35
SEC61A2-213ENST00000475268 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
SEC61A2-213ENST00000475268 KCNH5Q8NCM2 988 aa23.5■■□□□ 1.35
SEC61A2-213ENST00000475268 PLEKHG5O94827 1062 aa23.5■■□□□ 1.35
SEC61A2-213ENST00000475268 MCM10Q7L590 875 aa23.49■■□□□ 1.35
SEC61A2-213ENST00000475268 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
SEC61A2-213ENST00000475268 FTSJ3Q8IY81 847 aaKnown RBP23.49■■□□□ 1.35
SEC61A2-213ENST00000475268 RTL1A6NKG5 1358 aa23.49■■□□□ 1.35
SEC61A2-213ENST00000475268 NFAT5O94916 1531 aa23.49■■□□□ 1.35
SEC61A2-213ENST00000475268 ZBTB7CA1YPR0 619 aa23.48■■□□□ 1.35
SEC61A2-213ENST00000475268 LTN1O94822 1766 aa23.48■■□□□ 1.35
SEC61A2-213ENST00000475268 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
SEC61A2-213ENST00000475268 ALDH1L2Q3SY69 923 aa23.48■■□□□ 1.35
SEC61A2-213ENST00000475268 DZIP1LQ8IYY4 767 aaKnown RBP23.48■■□□□ 1.35
SEC61A2-213ENST00000475268 NOB1Q9ULX3 412 aaKnown RBP23.48■■□□□ 1.35
SEC61A2-213ENST00000475268 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
SEC61A2-213ENST00000475268 VAMP4O75379 141 aa23.47■■□□□ 1.35
SEC61A2-213ENST00000475268 MS4A1P11836 297 aa23.47■■□□□ 1.35
SEC61A2-213ENST00000475268 IP6K1Q92551 441 aa23.47■■□□□ 1.35
SEC61A2-213ENST00000475268 ELL2O00472 640 aaPredicted RBP23.46■■□□□ 1.35
SEC61A2-213ENST00000475268 TRIM27P14373 513 aa23.46■■□□□ 1.35
SEC61A2-213ENST00000475268 ZNF428Q96B54 188 aa23.46■■□□□ 1.35
SEC61A2-213ENST00000475268 KIF1AQ12756 1690 aa23.46■■□□□ 1.35
SEC61A2-213ENST00000475268 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.35
SEC61A2-213ENST00000475268 SKAP1Q86WV1 359 aa23.45■■□□□ 1.35
SEC61A2-213ENST00000475268 KIF16BQ96L93 1317 aa23.45■■□□□ 1.34
SEC61A2-213ENST00000475268 ATF7IPQ6VMQ6 1270 aa23.45■■□□□ 1.34
SEC61A2-213ENST00000475268 MST1RQ04912 1400 aa23.45■■□□□ 1.34
SEC61A2-213ENST00000475268 GCP02774 474 aa23.44■■□□□ 1.34
SEC61A2-213ENST00000475268 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
SEC61A2-213ENST00000475268 LMTK3Q96Q04 1460 aa23.44■■□□□ 1.34
SEC61A2-213ENST00000475268 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
SEC61A2-213ENST00000475268 TWISTNBQ3B726 338 aaPredicted RBP23.43■■□□□ 1.34
SEC61A2-213ENST00000475268 C8orf58Q8NAV2 365 aa23.43■■□□□ 1.34
SEC61A2-213ENST00000475268 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
SEC61A2-213ENST00000475268 RTF1Q92541 710 aaKnown RBP23.43■■□□□ 1.34
SEC61A2-213ENST00000475268 DCCP43146 1447 aa23.43■■□□□ 1.34
SEC61A2-213ENST00000475268 IPO8O15397 1037 aaKnown RBP23.42■■□□□ 1.34
SEC61A2-213ENST00000475268 AAMPQ13685 434 aa23.42■■□□□ 1.34
SEC61A2-213ENST00000475268 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
SEC61A2-213ENST00000475268 IGHDP01880 384 aa23.41■■□□□ 1.34
SEC61A2-213ENST00000475268 CADPS2Q86UW7 1296 aa23.41■■□□□ 1.34
SEC61A2-213ENST00000475268 USHBP1Q8N6Y0 703 aa23.41■■□□□ 1.34
SEC61A2-213ENST00000475268 CHL1O00533 1208 aa23.4■■□□□ 1.34
SEC61A2-213ENST00000475268 DDX17Q92841 729 aaKnown RBP23.4■■□□□ 1.34
SEC61A2-213ENST00000475268 SLIT3O75094 1523 aa23.39■■□□□ 1.34
SEC61A2-213ENST00000475268 MSH6P52701 1360 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms