RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 SRCIN1Q9C0H9 1055 aa11.63□□□□□ -0.55
CDH23-211ENST00000475158 G3V3G9 751 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 ATP10BO94823 1461 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 ATP2B1P20020 1258 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 TSHZ3Q63HK5 1081 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 RPGRIP1LQ68CZ1 1315 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 NUP153P49790 1475 aaKnown RBP11.62□□□□□ -0.55
CDH23-211ENST00000475158 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
CDH23-211ENST00000475158 NCBP3Q53F19 620 aaKnown RBP11.62□□□□□ -0.55
CDH23-211ENST00000475158 TESK2Q96S53 571 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 LRRCC1Q9C099 1032 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 ANXA1P04083 346 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 CNTROBQ8N137 903 aa11.62□□□□□ -0.55
CDH23-211ENST00000475158 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
CDH23-211ENST00000475158 VPS37DQ86XT2 251 aa11.61□□□□□ -0.55
CDH23-211ENST00000475158 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
CDH23-211ENST00000475158 PCDHB15Q9Y5E8 787 aa11.61□□□□□ -0.55
CDH23-211ENST00000475158 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
CDH23-211ENST00000475158 TRDNQ13061 729 aa11.6□□□□□ -0.55
CDH23-211ENST00000475158 NFXL1Q6ZNB6 911 aa11.6□□□□□ -0.55
CDH23-211ENST00000475158 PTCD1O75127 700 aaKnown RBP11.6□□□□□ -0.55
CDH23-211ENST00000475158 CCAR2Q8N163 923 aaKnown RBP11.6□□□□□ -0.55
CDH23-211ENST00000475158 KIF14Q15058 1648 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 TPM4P67936 248 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 AKAP17AQ02040 695 aaKnown RBP11.59□□□□□ -0.55
CDH23-211ENST00000475158 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
CDH23-211ENST00000475158 C14orf93Q9H972 538 aaKnown RBP11.59□□□□□ -0.55
CDH23-211ENST00000475158 RABEP1Q15276 862 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 TOM1L2Q6ZVM7 507 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 CHMP4CQ96CF2 233 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 MPRIPQ6WCQ1 1025 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 FMNL2Q96PY5 1086 aa11.59□□□□□ -0.55
CDH23-211ENST00000475158 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
CDH23-211ENST00000475158 K7ELQ4 463 aaPredicted RBP11.58□□□□□ -0.55
CDH23-211ENST00000475158 MCM4P33991 863 aa11.58□□□□□ -0.55
CDH23-211ENST00000475158 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.55
CDH23-211ENST00000475158 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.55
CDH23-211ENST00000475158 SYNE3Q6ZMZ3 975 aa11.58□□□□□ -0.55
CDH23-211ENST00000475158 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.55
CDH23-211ENST00000475158 CARD14Q9BXL6 1004 aa11.58□□□□□ -0.55
CDH23-211ENST00000475158 AMOTL2Q9Y2J4 779 aa11.58□□□□□ -0.55
CDH23-211ENST00000475158 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
CDH23-211ENST00000475158 BTBD11A6QL63 1104 aa11.58□□□□□ -0.56
CDH23-211ENST00000475158 WASLO00401 505 aaPredicted RBP11.58□□□□□ -0.56
CDH23-211ENST00000475158 MTERF4Q7Z6M4 381 aaKnown RBP11.58□□□□□ -0.56
CDH23-211ENST00000475158 FANCAO15360 1455 aa11.58□□□□□ -0.56
CDH23-211ENST00000475158 MARCH6O60337 910 aa11.58□□□□□ -0.56
CDH23-211ENST00000475158 CT47B1P0C2W7 299 aaPredicted RBP11.58□□□□□ -0.56
CDH23-211ENST00000475158 RLBP1P12271 317 aa11.58□□□□□ -0.56
CDH23-211ENST00000475158 PRDM11Q9NQV5 511 aa11.58□□□□□ -0.56
CDH23-211ENST00000475158 UGGT2Q9NYU1 1516 aa11.57□□□□□ -0.56
CDH23-211ENST00000475158 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
CDH23-211ENST00000475158 AACSQ86V21 672 aa11.57□□□□□ -0.56
CDH23-211ENST00000475158 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
CDH23-211ENST00000475158 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
CDH23-211ENST00000475158 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
CDH23-211ENST00000475158 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
CDH23-211ENST00000475158 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
CDH23-211ENST00000475158 FERMT3Q86UX7 667 aa11.56□□□□□ -0.56
CDH23-211ENST00000475158 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
CDH23-211ENST00000475158 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
CDH23-211ENST00000475158 DHX16O60231 1041 aaKnown RBP11.56□□□□□ -0.56
CDH23-211ENST00000475158 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
CDH23-211ENST00000475158 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
CDH23-211ENST00000475158 CCDC34Q96HJ3 373 aa11.56□□□□□ -0.56
CDH23-211ENST00000475158 GNAT3A8MTJ3 354 aa11.56□□□□□ -0.56
CDH23-211ENST00000475158 PER1O15534 1290 aaPredicted RBP11.56□□□□□ -0.56
CDH23-211ENST00000475158 CABP4P57796 275 aa11.56□□□□□ -0.56
CDH23-211ENST00000475158 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
CDH23-211ENST00000475158 SDF4Q9BRK5 362 aa11.56□□□□□ -0.56
CDH23-211ENST00000475158 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
CDH23-211ENST00000475158 TRIM29Q14134 588 aa11.55□□□□□ -0.56
CDH23-211ENST00000475158 TPD52L1Q16890 204 aaPredicted RBP11.55□□□□□ -0.56
CDH23-211ENST00000475158 JARID2Q92833 1246 aaPredicted RBP11.55□□□□□ -0.56
CDH23-211ENST00000475158 MBIPQ9NS73 344 aa11.55□□□□□ -0.56
CDH23-211ENST00000475158 PLEKHH1Q9ULM0 1364 aa11.55□□□□□ -0.56
CDH23-211ENST00000475158 UQCRHLA0A096LP55 91 aa11.55□□□□□ -0.56
CDH23-211ENST00000475158 UQCRHP07919 91 aa11.55□□□□□ -0.56
CDH23-211ENST00000475158 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDH23-211ENST00000475158 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 GRPEL1Q9HAV7 217 aa11.54□□□□□ -0.56
CDH23-211ENST00000475158 DMRT2Q9Y5R5 561 aa11.54□□□□□ -0.56
CDH23-211ENST00000475158 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 SASS6Q6UVJ0 657 aa11.54□□□□□ -0.56
CDH23-211ENST00000475158 LRRFIP2Q9Y608 721 aaKnown RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
CDH23-211ENST00000475158 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 CCDC73Q6ZRK6 1079 aa11.54□□□□□ -0.56
CDH23-211ENST00000475158 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
CDH23-211ENST00000475158 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.54□□□□□ -0.56
CDH23-211ENST00000475158 PDIA4P13667 645 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms