RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
RPGR-206ENST00000474584 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
RPGR-206ENST00000474584 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
RPGR-206ENST00000474584 TRAK2O60296 914 aa17.6■□□□□ 0.41
RPGR-206ENST00000474584 FBLN1P23142 703 aa17.6■□□□□ 0.41
RPGR-206ENST00000474584 THUMPD2Q9BTF0 503 aaKnown RBP17.6■□□□□ 0.41
RPGR-206ENST00000474584 ABCC4O15439 1325 aa17.6■□□□□ 0.41
RPGR-206ENST00000474584 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
RPGR-206ENST00000474584 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
RPGR-206ENST00000474584 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.59■□□□□ 0.41
RPGR-206ENST00000474584 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
RPGR-206ENST00000474584 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
RPGR-206ENST00000474584 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
RPGR-206ENST00000474584 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
RPGR-206ENST00000474584 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.41
RPGR-206ENST00000474584 IL13P35225 146 aa17.58■□□□□ 0.4
RPGR-206ENST00000474584 TSPYL6Q8N831 410 aa17.58■□□□□ 0.4
RPGR-206ENST00000474584 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.4
RPGR-206ENST00000474584 C1orf115Q9H7X2 142 aa17.58■□□□□ 0.4
RPGR-206ENST00000474584 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.4
RPGR-206ENST00000474584 AATKQ6ZMQ8 1374 aa17.58■□□□□ 0.4
RPGR-206ENST00000474584 RIMS2Q9UQ26 1411 aa17.58■□□□□ 0.4
RPGR-206ENST00000474584 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.4
RPGR-206ENST00000474584 ZNF853P0CG23 659 aa17.58■□□□□ 0.4
RPGR-206ENST00000474584 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
RPGR-206ENST00000474584 CIZ1Q9ULV3 898 aaPredicted RBP17.58■□□□□ 0.4
RPGR-206ENST00000474584 SPATA31D1Q6ZQQ2 1576 aa17.57■□□□□ 0.4
RPGR-206ENST00000474584 DDIT3P35638 169 aa17.57■□□□□ 0.4
RPGR-206ENST00000474584 ARXQ96QS3 562 aa17.56■□□□□ 0.4
RPGR-206ENST00000474584 ITSN1Q15811 1721 aa17.56■□□□□ 0.4
RPGR-206ENST00000474584 CFAP44Q96MT7 982 aa17.56■□□□□ 0.4
RPGR-206ENST00000474584 API5Q9BZZ5 524 aaKnown RBP17.56■□□□□ 0.4
RPGR-206ENST00000474584 XRCC6P12956 609 aaKnown RBP eCLIP17.55■□□□□ 0.4
RPGR-206ENST00000474584 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
RPGR-206ENST00000474584 AGLP35573 1532 aa17.55■□□□□ 0.4
RPGR-206ENST00000474584 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
RPGR-206ENST00000474584 ELL2O00472 640 aaPredicted RBP17.55■□□□□ 0.4
RPGR-206ENST00000474584 NME9Q86XW9 330 aa17.55■□□□□ 0.4
RPGR-206ENST00000474584 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
RPGR-206ENST00000474584 TBC1D9Q6ZT07 1266 aa17.54■□□□□ 0.4
RPGR-206ENST00000474584 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
RPGR-206ENST00000474584 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
RPGR-206ENST00000474584 EIF5BO60841 1220 aaKnown RBP17.54■□□□□ 0.4
RPGR-206ENST00000474584 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
RPGR-206ENST00000474584 COG3Q96JB2 828 aa17.54■□□□□ 0.4
RPGR-206ENST00000474584 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
RPGR-206ENST00000474584 KIF24Q5T7B8 1368 aa17.53■□□□□ 0.4
RPGR-206ENST00000474584 SIRT2Q8IXJ6 389 aa17.52■□□□□ 0.4
RPGR-206ENST00000474584 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.4
RPGR-206ENST00000474584 C3P01024 1663 aa17.52■□□□□ 0.4
RPGR-206ENST00000474584 MRE11P49959 708 aa17.52■□□□□ 0.4
RPGR-206ENST00000474584 KIF2CQ99661 725 aa17.52■□□□□ 0.4
RPGR-206ENST00000474584 CDC45O75419 566 aa17.51■□□□□ 0.39
RPGR-206ENST00000474584 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
RPGR-206ENST00000474584 TNPO1Q92973 898 aaKnown RBP17.51■□□□□ 0.39
RPGR-206ENST00000474584 PTMSP20962 102 aa17.51■□□□□ 0.39
RPGR-206ENST00000474584 NRKQ7Z2Y5 1582 aa17.51■□□□□ 0.39
RPGR-206ENST00000474584 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
RPGR-206ENST00000474584 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
RPGR-206ENST00000474584 HAP1P54257 671 aaPredicted RBP17.5■□□□□ 0.39
RPGR-206ENST00000474584 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
RPGR-206ENST00000474584 CPS1P31327 1500 aa17.5■□□□□ 0.39
RPGR-206ENST00000474584 NUDT16Q96DE0 195 aaKnown RBP17.49■□□□□ 0.39
RPGR-206ENST00000474584 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
RPGR-206ENST00000474584 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
RPGR-206ENST00000474584 PANK2Q9BZ23 570 aa17.49■□□□□ 0.39
RPGR-206ENST00000474584 RRAGDQ9NQL2 400 aaPredicted RBP17.49■□□□□ 0.39
RPGR-206ENST00000474584 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
RPGR-206ENST00000474584 TSPOAP1O95153 1857 aa17.48■□□□□ 0.39
RPGR-206ENST00000474584 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
RPGR-206ENST00000474584 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
RPGR-206ENST00000474584 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPGR-206ENST00000474584 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
RPGR-206ENST00000474584 METP08581 1390 aa17.47■□□□□ 0.39
RPGR-206ENST00000474584 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
RPGR-206ENST00000474584 DCTPP1Q9H773 170 aa17.46■□□□□ 0.39
RPGR-206ENST00000474584 TECPR2O15040 1411 aa17.46■□□□□ 0.38
RPGR-206ENST00000474584 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
RPGR-206ENST00000474584 INTS3Q68E01 1043 aaKnown RBP17.45■□□□□ 0.38
RPGR-206ENST00000474584 TXNDC2Q86VQ3 553 aa17.45■□□□□ 0.38
RPGR-206ENST00000474584 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
RPGR-206ENST00000474584 GSPT1P15170 499 aaKnown RBP17.45■□□□□ 0.38
RPGR-206ENST00000474584 PLEKHM2Q8IWE5 1019 aa17.45■□□□□ 0.38
RPGR-206ENST00000474584 ATP10DQ9P241 1426 aa17.43■□□□□ 0.38
RPGR-206ENST00000474584 GOLGA6L22H0YM25 854 aa17.43■□□□□ 0.38
RPGR-206ENST00000474584 TTC22Q5TAA0 569 aa17.43■□□□□ 0.38
RPGR-206ENST00000474584 SIRT1Q96EB6 747 aa17.43■□□□□ 0.38
RPGR-206ENST00000474584 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
RPGR-206ENST00000474584 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
RPGR-206ENST00000474584 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
RPGR-206ENST00000474584 RABEP1Q15276 862 aa17.42■□□□□ 0.38
RPGR-206ENST00000474584 ANKRD44Q8N8A2 993 aa17.42■□□□□ 0.38
RPGR-206ENST00000474584 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
RPGR-206ENST00000474584 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
RPGR-206ENST00000474584 RGS12O14924 1447 aa17.42■□□□□ 0.38
RPGR-206ENST00000474584 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
RPGR-206ENST00000474584 PTPRCP08575 1304 aa17.41■□□□□ 0.38
RPGR-206ENST00000474584 HDGFP51858 240 aaKnown RBP17.41■□□□□ 0.38
RPGR-206ENST00000474584 SULT6B1Q6IMI4 303 aa17.41■□□□□ 0.38
RPGR-206ENST00000474584 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms