RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CCDC39Q9UFE4 941 aa22.93■■□□□ 1.26
ECHDC1-214ENST00000474289 SETBP1Q9Y6X0 1596 aa22.92■■□□□ 1.26
ECHDC1-214ENST00000474289 ALDH1L2Q3SY69 923 aa22.92■■□□□ 1.26
ECHDC1-214ENST00000474289 LRSAM1Q6UWE0 723 aa22.92■■□□□ 1.26
ECHDC1-214ENST00000474289 PRDM10Q9NQV6 1147 aa22.91■■□□□ 1.26
ECHDC1-214ENST00000474289 TMEM63CQ9P1W3 806 aa22.91■■□□□ 1.26
ECHDC1-214ENST00000474289 NSD2O96028 1365 aa22.91■■□□□ 1.26
ECHDC1-214ENST00000474289 GSPT1P15170 499 aaKnown RBP22.91■■□□□ 1.26
ECHDC1-214ENST00000474289 REREQ9P2R6 1566 aa22.91■■□□□ 1.26
ECHDC1-214ENST00000474289 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
ECHDC1-214ENST00000474289 ADGRB3O60242 1522 aa22.9■■□□□ 1.26
ECHDC1-214ENST00000474289 SYCE3A1L190 88 aa22.9■■□□□ 1.26
ECHDC1-214ENST00000474289 C14orf93Q9H972 538 aaKnown RBP22.9■■□□□ 1.26
ECHDC1-214ENST00000474289 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
ECHDC1-214ENST00000474289 ZGPATQ8N5A5 531 aaKnown RBP22.88■■□□□ 1.25
ECHDC1-214ENST00000474289 CWC22Q9HCG8 908 aaKnown RBP22.88■■□□□ 1.25
ECHDC1-214ENST00000474289 ZDHHC9Q9Y397 364 aa22.88■■□□□ 1.25
ECHDC1-214ENST00000474289 ABCA9Q8IUA7 1624 aa22.88■■□□□ 1.25
ECHDC1-214ENST00000474289 CCDC94Q9BW85 323 aaPredicted RBP22.88■■□□□ 1.25
ECHDC1-214ENST00000474289 NSFL1CQ9UNZ2 370 aaKnown RBP22.87■■□□□ 1.25
ECHDC1-214ENST00000474289 CHAMP1Q96JM3 812 aa22.87■■□□□ 1.25
ECHDC1-214ENST00000474289 ANKRD36BQ8N2N9 1353 aa22.87■■□□□ 1.25
ECHDC1-214ENST00000474289 ZHX1Q9UKY1 873 aaPredicted RBP22.86■■□□□ 1.25
ECHDC1-214ENST00000474289 COL3A1P02461 1466 aaPredicted RBP22.86■■□□□ 1.25
ECHDC1-214ENST00000474289 USP26Q9BXU7 913 aa22.86■■□□□ 1.25
ECHDC1-214ENST00000474289 CFAP65Q6ZU64 1925 aaKnown RBP22.85■■□□□ 1.25
ECHDC1-214ENST00000474289 BRPF1P55201 1214 aaPredicted RBP22.85■■□□□ 1.25
ECHDC1-214ENST00000474289 RNF214Q8ND24 703 aa22.85■■□□□ 1.25
ECHDC1-214ENST00000474289 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
ECHDC1-214ENST00000474289 PIK3R4Q99570 1358 aa22.84■■□□□ 1.25
ECHDC1-214ENST00000474289 NUTM2DQ5VT03 806 aaPredicted RBP22.83■■□□□ 1.25
ECHDC1-214ENST00000474289 PLEKHM2Q8IWE5 1019 aa22.83■■□□□ 1.25
ECHDC1-214ENST00000474289 CHMP4BQ9H444 224 aaKnown RBP22.83■■□□□ 1.25
ECHDC1-214ENST00000474289 PPLO60437 1756 aa22.83■■□□□ 1.25
ECHDC1-214ENST00000474289 DMTNQ08495 405 aa22.83■■□□□ 1.25
ECHDC1-214ENST00000474289 KIAA2012Q0VF49 1180 aa22.82■■□□□ 1.24
ECHDC1-214ENST00000474289 CABP2Q9NPB3 220 aa22.82■■□□□ 1.24
ECHDC1-214ENST00000474289 UTP14CQ5TAP6 766 aaKnown RBP22.82■■□□□ 1.24
ECHDC1-214ENST00000474289 MYRIPQ8NFW9 859 aa22.82■■□□□ 1.24
ECHDC1-214ENST00000474289 ZSCAN20P17040 1043 aaPredicted RBP22.81■■□□□ 1.24
ECHDC1-214ENST00000474289 PTCH1Q13635 1447 aa22.81■■□□□ 1.24
ECHDC1-214ENST00000474289 TULP4Q9NRJ4 1543 aa22.81■■□□□ 1.24
ECHDC1-214ENST00000474289 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
ECHDC1-214ENST00000474289 ST18O60284 1047 aa22.8■■□□□ 1.24
ECHDC1-214ENST00000474289 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
ECHDC1-214ENST00000474289 PTMAP06454 111 aaKnown RBP22.8■■□□□ 1.24
ECHDC1-214ENST00000474289 TTC22Q5TAA0 569 aa22.8■■□□□ 1.24
ECHDC1-214ENST00000474289 ZNF428Q96B54 188 aa22.8■■□□□ 1.24
ECHDC1-214ENST00000474289 SAFB2Q14151 953 aaKnown RBP eCLIP22.79■■□□□ 1.24
ECHDC1-214ENST00000474289 NPATQ14207 1427 aa22.79■■□□□ 1.24
ECHDC1-214ENST00000474289 CFAP44Q96MT7 982 aa22.79■■□□□ 1.24
ECHDC1-214ENST00000474289 KIDINS220Q9ULH0 1771 aa22.79■■□□□ 1.24
ECHDC1-214ENST00000474289 EVC2Q86UK5 1308 aa22.79■■□□□ 1.24
ECHDC1-214ENST00000474289 MRPL50Q8N5N7 158 aaKnown RBP22.79■■□□□ 1.24
ECHDC1-214ENST00000474289 ARHGAP45Q92619 1136 aa22.79■■□□□ 1.24
ECHDC1-214ENST00000474289 LMTK2Q8IWU2 1503 aa22.78■■□□□ 1.24
ECHDC1-214ENST00000474289 A0A0U1RQG5 324 aaPredicted RBP22.78■■□□□ 1.24
ECHDC1-214ENST00000474289 ZBTB7CA1YPR0 619 aa22.78■■□□□ 1.24
ECHDC1-214ENST00000474289 MBD3O95983 291 aa22.78■■□□□ 1.24
ECHDC1-214ENST00000474289 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
ECHDC1-214ENST00000474289 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.24
ECHDC1-214ENST00000474289 ABCC4O15439 1325 aa22.77■■□□□ 1.24
ECHDC1-214ENST00000474289 DNTTIP2Q5QJE6 756 aaKnown RBP22.77■■□□□ 1.24
ECHDC1-214ENST00000474289 ZNF710Q8N1W2 664 aa22.77■■□□□ 1.24
ECHDC1-214ENST00000474289 TSC1Q92574 1164 aa22.77■■□□□ 1.24
ECHDC1-214ENST00000474289 GLI2P10070 1586 aa22.76■■□□□ 1.23
ECHDC1-214ENST00000474289 FOXD4L5Q5VV16 416 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-214ENST00000474289 FOXD4L4Q8WXT5 416 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-214ENST00000474289 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-214ENST00000474289 VAMP4O75379 141 aa22.76■■□□□ 1.23
ECHDC1-214ENST00000474289 GGT6Q6P531 493 aa22.75■■□□□ 1.23
ECHDC1-214ENST00000474289 C16orf71Q8IYS4 520 aaPredicted RBP22.74■■□□□ 1.23
ECHDC1-214ENST00000474289 PUS7Q96PZ0 661 aaKnown RBP22.74■■□□□ 1.23
ECHDC1-214ENST00000474289 TSPY26PQ9H489 355 aa22.74■■□□□ 1.23
ECHDC1-214ENST00000474289 TSPYL6Q8N831 410 aa22.73■■□□□ 1.23
ECHDC1-214ENST00000474289 PRIMPOLQ96LW4 560 aa22.73■■□□□ 1.23
ECHDC1-214ENST00000474289 KNDC1Q76NI1 1749 aa22.73■■□□□ 1.23
ECHDC1-214ENST00000474289 A0A1W2PP64 1363 aa22.73■■□□□ 1.23
ECHDC1-214ENST00000474289 ARHGEF28Q8N1W1 1705 aaKnown RBP22.73■■□□□ 1.23
ECHDC1-214ENST00000474289 GTF2F1P35269 517 aaKnown RBP eCLIP22.72■■□□□ 1.23
ECHDC1-214ENST00000474289 DCTPP1Q9H773 170 aa22.72■■□□□ 1.23
ECHDC1-214ENST00000474289 DIAPH1O60610 1272 aaKnown RBP22.71■■□□□ 1.23
ECHDC1-214ENST00000474289 OTUD7AQ8TE49 926 aaPredicted RBP22.71■■□□□ 1.23
ECHDC1-214ENST00000474289 PIBF1Q8WXW3 757 aa22.71■■□□□ 1.23
ECHDC1-214ENST00000474289 ATAD2Q6PL18 1390 aa22.71■■□□□ 1.23
ECHDC1-214ENST00000474289 SDSP20132 328 aa22.71■■□□□ 1.23
ECHDC1-214ENST00000474289 MPNDQ8N594 471 aa22.7■■□□□ 1.22
ECHDC1-214ENST00000474289 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.22
ECHDC1-214ENST00000474289 HMGN5P82970 282 aaKnown RBP22.7■■□□□ 1.22
ECHDC1-214ENST00000474289 CBX1P83916 185 aa22.69■■□□□ 1.22
ECHDC1-214ENST00000474289 ZNF830Q96NB3 372 aaPredicted RBP22.69■■□□□ 1.22
ECHDC1-214ENST00000474289 ELL2O00472 640 aaPredicted RBP22.69■■□□□ 1.22
ECHDC1-214ENST00000474289 NOLC1Q14978 699 aaKnown RBP eCLIP22.69■■□□□ 1.22
ECHDC1-214ENST00000474289 CASC1Q6TDU7 716 aa22.68■■□□□ 1.22
ECHDC1-214ENST00000474289 THUMPD2Q9BTF0 503 aaKnown RBP22.68■■□□□ 1.22
ECHDC1-214ENST00000474289 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
ECHDC1-214ENST00000474289 BRD1O95696 1058 aa22.68■■□□□ 1.22
ECHDC1-214ENST00000474289 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
ECHDC1-214ENST00000474289 SRPK2P78362 688 aaKnown RBP22.67■■□□□ 1.22
ECHDC1-214ENST00000474289 STK26Q9P289 416 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms