RNA–Protein interactions for RNA: ENST00000473657.1

PHACTR3-207, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2

Gene PHACTR3, Length 2,408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-207ENST00000473657 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
PHACTR3-207ENST00000473657 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
PHACTR3-207ENST00000473657 PANK1Q8TE04 598 aa11.58□□□□□ -0.56
PHACTR3-207ENST00000473657 SBNO1A3KN83 1393 aa11.58□□□□□ -0.56
PHACTR3-207ENST00000473657 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
PHACTR3-207ENST00000473657 ZNF853P0CG23 659 aa11.58□□□□□ -0.56
PHACTR3-207ENST00000473657 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 FLT4P35916 1363 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 RLBP1P12271 317 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 MAP3K19Q56UN5 1328 aa11.57□□□□□ -0.56
PHACTR3-207ENST00000473657 BRPF1P55201 1214 aaPredicted RBP11.56□□□□□ -0.56
PHACTR3-207ENST00000473657 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
PHACTR3-207ENST00000473657 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
PHACTR3-207ENST00000473657 HSP90AB2PQ58FF8 381 aa11.56□□□□□ -0.56
PHACTR3-207ENST00000473657 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
PHACTR3-207ENST00000473657 SSH1Q8WYL5 1049 aa11.56□□□□□ -0.56
PHACTR3-207ENST00000473657 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
PHACTR3-207ENST00000473657 KDRP35968 1356 aa11.55□□□□□ -0.56
PHACTR3-207ENST00000473657 GNAI1P63096 354 aa11.55□□□□□ -0.56
PHACTR3-207ENST00000473657 TNNQ9UQP3 1299 aa11.55□□□□□ -0.56
PHACTR3-207ENST00000473657 AEBP1Q8IUX7 1158 aa11.54□□□□□ -0.56
PHACTR3-207ENST00000473657 SMC4Q9NTJ3 1288 aa11.54□□□□□ -0.56
PHACTR3-207ENST00000473657 MVPQ14764 893 aaKnown RBP11.54□□□□□ -0.56
PHACTR3-207ENST00000473657 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
PHACTR3-207ENST00000473657 BACH2Q9BYV9 841 aa11.54□□□□□ -0.56
PHACTR3-207ENST00000473657 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
PHACTR3-207ENST00000473657 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-207ENST00000473657 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
PHACTR3-207ENST00000473657 PHRF1Q9P1Y6 1649 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-207ENST00000473657 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
PHACTR3-207ENST00000473657 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
PHACTR3-207ENST00000473657 IGHDP01880 384 aa11.52□□□□□ -0.56
PHACTR3-207ENST00000473657 TRIM27P14373 513 aa11.52□□□□□ -0.56
PHACTR3-207ENST00000473657 PDE4AP27815 886 aa11.52□□□□□ -0.56
PHACTR3-207ENST00000473657 THUMPD2Q9BTF0 503 aaKnown RBP11.52□□□□□ -0.56
PHACTR3-207ENST00000473657 MSH5O43196 834 aa11.52□□□□□ -0.57
PHACTR3-207ENST00000473657 ATF7IPQ6VMQ6 1270 aa11.52□□□□□ -0.57
PHACTR3-207ENST00000473657 NFAT5O94916 1531 aa11.52□□□□□ -0.57
PHACTR3-207ENST00000473657 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
PHACTR3-207ENST00000473657 VAMP4O75379 141 aa11.51□□□□□ -0.57
PHACTR3-207ENST00000473657 NLRP6P59044 892 aa11.51□□□□□ -0.57
PHACTR3-207ENST00000473657 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
PHACTR3-207ENST00000473657 SKAP1Q86WV1 359 aa11.51□□□□□ -0.57
PHACTR3-207ENST00000473657 LTN1O94822 1766 aa11.51□□□□□ -0.57
PHACTR3-207ENST00000473657 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
PHACTR3-207ENST00000473657 PCDHB15Q9Y5E8 787 aa11.5□□□□□ -0.57
PHACTR3-207ENST00000473657 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 HOXC9P31274 260 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 FTSJ3Q8IY81 847 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 ABTB2Q8N961 1025 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 AMPHP49418 695 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 DDX19BQ9UMR2 479 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 CRB1P82279 1406 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 TRPM3Q9HCF6 1732 aaPredicted RBP11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
PHACTR3-207ENST00000473657 SOX12O15370 315 aa11.48□□□□□ -0.57
PHACTR3-207ENST00000473657 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
PHACTR3-207ENST00000473657 EYA1Q99502 592 aa11.48□□□□□ -0.57
PHACTR3-207ENST00000473657 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
PHACTR3-207ENST00000473657 CHL1O00533 1208 aa11.48□□□□□ -0.57
PHACTR3-207ENST00000473657 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
PHACTR3-207ENST00000473657 VIRMAQ69YN4 1812 aaKnown RBP11.48□□□□□ -0.57
PHACTR3-207ENST00000473657 MST1RQ04912 1400 aa11.47□□□□□ -0.57
PHACTR3-207ENST00000473657 SLIT3O75094 1523 aa11.47□□□□□ -0.57
PHACTR3-207ENST00000473657 RBM33Q96EV2 1170 aaKnown RBP11.47□□□□□ -0.57
PHACTR3-207ENST00000473657 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
PHACTR3-207ENST00000473657 DCTN1Q14203 1278 aa11.47□□□□□ -0.57
PHACTR3-207ENST00000473657 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.57
PHACTR3-207ENST00000473657 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
PHACTR3-207ENST00000473657 C8orf58Q8NAV2 365 aa11.46□□□□□ -0.57
PHACTR3-207ENST00000473657 STRCP1A6NGW2 1772 aa11.46□□□□□ -0.58
PHACTR3-207ENST00000473657 MTHFSDQ2M296 383 aaKnown RBP11.46□□□□□ -0.58
PHACTR3-207ENST00000473657 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.58
PHACTR3-207ENST00000473657 NCOA3Q9Y6Q9 1424 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 HTATSF1O43719 755 aaKnown RBP11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 HDAC1Q13547 482 aaPredicted RBP11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 NUTM2GQ5VZR2 741 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 ZBTB40Q9NUA8 1239 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 C1orf167Q5SNV9 1468 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 ANP32AP39687 249 aaKnown RBP11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 FAM161AQ3B820 660 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 C8orf34Q49A92 452 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 DCCP43146 1447 aa11.45□□□□□ -0.58
PHACTR3-207ENST00000473657 ABCC4O15439 1325 aa11.44□□□□□ -0.58
PHACTR3-207ENST00000473657 PSME1Q06323 249 aa11.44□□□□□ -0.58
PHACTR3-207ENST00000473657 MCM10Q7L590 875 aa11.44□□□□□ -0.58
PHACTR3-207ENST00000473657 ITPRIPQ8IWB1 547 aa11.44□□□□□ -0.58
PHACTR3-207ENST00000473657 IP6K1Q92551 441 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms