RNA–Protein interactions for RNA: ENST00000473515.5

SCML4-209, Transcript of Scm polycomb group protein like 4, human

TSL 2

Gene SCML4, Length 4,297 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCML4-209	ENST00000473515	ACE	P12821	1306 aa		11.47	□□□□□ -0.57
SCML4-209	ENST00000473515	GNAI2	P04899	355 aa		11.46	□□□□□ -0.57
SCML4-209	ENST00000473515	TOMM22	Q9NS69	142 aa		11.46	□□□□□ -0.57
SCML4-209	ENST00000473515	PRDM15	P57071	1507 aa	Predicted RBP	11.46	□□□□□ -0.57
SCML4-209	ENST00000473515	CDC42BPA	Q5VT25	1732 aa		11.46	□□□□□ -0.58
SCML4-209	ENST00000473515	SYAP1	Q96A49	352 aa	Predicted RBP	11.46	□□□□□ -0.58
SCML4-209	ENST00000473515	KIAA2012	Q0VF49	1180 aa		11.46	□□□□□ -0.58
SCML4-209	ENST00000473515	HSP90AB2P	Q58FF8	381 aa		11.46	□□□□□ -0.58
SCML4-209	ENST00000473515	ANKRD36B	Q8N2N9	1353 aa		11.45	□□□□□ -0.58
SCML4-209	ENST00000473515	PIK3C2G	O75747	1445 aa		11.45	□□□□□ -0.58
SCML4-209	ENST00000473515		F6X3S4	739 aa		11.45	□□□□□ -0.58
SCML4-209	ENST00000473515	SEC24B	O95487	1268 aa		11.45	□□□□□ -0.58
SCML4-209	ENST00000473515	DRC7	Q8IY82	874 aa		11.45	□□□□□ -0.58
SCML4-209	ENST00000473515	NEUROD6	Q96NK8	337 aa		11.45	□□□□□ -0.58
SCML4-209	ENST00000473515	VSIG10	Q8N0Z9	540 aa		11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	RUFY2	Q8WXA3	655 aa		11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	EXOC6B	Q9Y2D4	811 aa		11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	CLASRP	Q8N2M8	674 aa	Known RBP	11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	ISY1	Q9ULR0	285 aa	Known RBP	11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	MYL6B	P14649	208 aa		11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	IL1RAPL2	Q9NP60	686 aa		11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	PHF8	Q9UPP1	1060 aa		11.44	□□□□□ -0.58
SCML4-209	ENST00000473515	ZKSCAN1	P17029	563 aa	Predicted RBP	11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	IFT57	Q9NWB7	429 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	ZNF521	Q96K83	1311 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	ATP7A	Q04656	1500 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	TNR	Q92752	1358 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	GNAT3	A8MTJ3	354 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	TULP1	O00294	542 aa	Predicted RBP	11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	RLBP1	P12271	317 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	TAT	P17735	454 aa	Predicted RBP	11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	NASP	P49321	788 aa	Predicted RBP	11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	HSP90AB4P	Q58FF6	505 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	DDX54	Q8TDD1	881 aa	Known RBP	11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	SRCIN1	Q9C0H9	1055 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	NSD2	O96028	1365 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	ABCC11	Q96J66	1382 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	CAVIN1	Q6NZI2	390 aa	Known RBP	11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	AEBP1	Q8IUX7	1158 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	PPP6R1	Q9UPN7	881 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	DMRT2	Q9Y5R5	561 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	CCT4	P50991	539 aa	Known RBP	11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	NUCB2	P80303	420 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	UBE2Q2	Q8WVN8	375 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	POLK	Q9UBT6	870 aa		11.43	□□□□□ -0.58
SCML4-209	ENST00000473515	ABCA8	O94911	1581 aa		11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	NEK4	P51957	841 aa		11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	SIL1	Q9H173	461 aa		11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	MAP4K4	O95819	1239 aa	Predicted RBP	11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	CHAF1A	Q13111	956 aa	Predicted RBP	11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	MBIP	Q9NS73	344 aa		11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	LAMC1	P11047	1609 aa		11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	RNF214	Q8ND24	703 aa		11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	GRPEL1	Q9HAV7	217 aa		11.42	□□□□□ -0.58
SCML4-209	ENST00000473515	BTBD11	A6QL63	1104 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	SMARCA5	O60264	1052 aa	Predicted RBP	11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	TOM1L2	Q6ZVM7	507 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	TBC1D32	Q96NH3	1257 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	PRDM11	Q9NQV5	511 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	UHRF1BP1L	A0JNW5	1464 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	ERC2	O15083	957 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515		A0A1W2PP64	1363 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	RIMS2	Q9UQ26	1411 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	MAST1	Q9Y2H9	1570 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	SRGAP3	O43295	1099 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	MAGI2	Q86UL8	1455 aa		11.41	□□□□□ -0.58
SCML4-209	ENST00000473515	FAM177B	A6PVY3	158 aa		11.4	□□□□□ -0.58
SCML4-209	ENST00000473515	ALDH1L2	Q3SY69	923 aa		11.4	□□□□□ -0.58
SCML4-209	ENST00000473515	MPRIP	Q6WCQ1	1025 aa		11.4	□□□□□ -0.58
SCML4-209	ENST00000473515	LRRCC1	Q9C099	1032 aa		11.4	□□□□□ -0.58
SCML4-209	ENST00000473515	POLR3A	O14802	1390 aa	Predicted RBP	11.4	□□□□□ -0.58
SCML4-209	ENST00000473515		K7ELQ4	463 aa	Predicted RBP	11.4	□□□□□ -0.58
SCML4-209	ENST00000473515	NPC1L1	Q9UHC9	1359 aa		11.4	□□□□□ -0.59
SCML4-209	ENST00000473515	VPS37C	A5D8V6	355 aa	Predicted RBP	11.4	□□□□□ -0.59
SCML4-209	ENST00000473515	PRPF40A	O75400	957 aa	Known RBP	11.4	□□□□□ -0.59
SCML4-209	ENST00000473515	PHACTR3	Q96KR7	559 aa		11.4	□□□□□ -0.59
SCML4-209	ENST00000473515	TTC21B	Q7Z4L5	1316 aa		11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	TRMT2A	Q8IZ69	625 aa	Known RBP	11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	RBM42	Q9BTD8	480 aa	Known RBP	11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	FAM184A	Q8NB25	1140 aa		11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	FAM13B	Q9NYF5	915 aa		11.39	□□□□□ -0.59
SCML4-209	ENST00000473515		H3BQV1	296 aa		11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	IFFO2	Q5TF58	517 aa		11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	PPIP5K1	Q6PFW1	1433 aa		11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	SAMD9L	Q8IVG5	1584 aa		11.39	□□□□□ -0.59
SCML4-209	ENST00000473515	PLA2R1	Q13018	1463 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	FSD1	Q9BTV5	496 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	APP	P05067	770 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	CABP4	P57796	275 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	CLASP1	Q7Z460	1538 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	HTATSF1	O43719	755 aa	Known RBP	11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	RABEP1	Q15276	862 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	CNTROB	Q8N137	903 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	KCNH5	Q8NCM2	988 aa		11.38	□□□□□ -0.59
SCML4-209	ENST00000473515	FOSB	P53539	338 aa		11.37	□□□□□ -0.59
SCML4-209	ENST00000473515	TAF7	Q15545	349 aa	Predicted RBP	11.37	□□□□□ -0.59
SCML4-209	ENST00000473515	KRT24	Q2M2I5	525 aa		11.37	□□□□□ -0.59
SCML4-209	ENST00000473515	DNAJC2	Q99543	621 aa	Known RBP	11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms