RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ANKRD45Q5TZF3 282 aa26.48■■□□□ 1.83
COL18A1-207ENST00000473212 TRAK2O60296 914 aa26.47■■□□□ 1.83
COL18A1-207ENST00000473212 FSD2A1L4K1 749 aa26.47■■□□□ 1.83
COL18A1-207ENST00000473212 SIRT2Q8IXJ6 389 aa26.47■■□□□ 1.83
COL18A1-207ENST00000473212 C8orf58Q8NAV2 365 aa26.47■■□□□ 1.83
COL18A1-207ENST00000473212 RRAGDQ9NQL2 400 aaPredicted RBP26.47■■□□□ 1.83
COL18A1-207ENST00000473212 CDC42BPGQ6DT37 1551 aa26.47■■□□□ 1.83
COL18A1-207ENST00000473212 EIF5BO60841 1220 aaKnown RBP26.46■■□□□ 1.83
COL18A1-207ENST00000473212 ZNF692Q9BU19 519 aaPredicted RBP26.46■■□□□ 1.83
COL18A1-207ENST00000473212 A2ML1A8K2U0 1454 aa26.46■■□□□ 1.83
COL18A1-207ENST00000473212 FAM69CQ0P6D2 419 aa26.46■■□□□ 1.83
COL18A1-207ENST00000473212 RBM25P49756 843 aaKnown RBP26.45■■□□□ 1.83
COL18A1-207ENST00000473212 RIMS2Q9UQ26 1411 aa26.44■■□□□ 1.82
COL18A1-207ENST00000473212 METP08581 1390 aa26.44■■□□□ 1.82
COL18A1-207ENST00000473212 PRKCSHP14314 528 aaPredicted RBP26.43■■□□□ 1.82
COL18A1-207ENST00000473212 WASLO00401 505 aaPredicted RBP26.42■■□□□ 1.82
COL18A1-207ENST00000473212 PANK2Q9BZ23 570 aa26.42■■□□□ 1.82
COL18A1-207ENST00000473212 TSPOAP1O95153 1857 aa26.42■■□□□ 1.82
COL18A1-207ENST00000473212 ATP7BP35670 1465 aa26.42■■□□□ 1.82
COL18A1-207ENST00000473212 CPS1P31327 1500 aa26.42■■□□□ 1.82
COL18A1-207ENST00000473212 KRT24Q2M2I5 525 aa26.41■■□□□ 1.82
COL18A1-207ENST00000473212 TWISTNBQ3B726 338 aaPredicted RBP26.41■■□□□ 1.82
COL18A1-207ENST00000473212 ZNF853P0CG23 659 aa26.4■■□□□ 1.82
COL18A1-207ENST00000473212 NCOA3Q9Y6Q9 1424 aa26.4■■□□□ 1.82
COL18A1-207ENST00000473212 SETD1AO15047 1707 aaKnown RBP26.4■■□□□ 1.82
COL18A1-207ENST00000473212 CD2BP2O95400 341 aaKnown RBP26.4■■□□□ 1.82
COL18A1-207ENST00000473212 SNX21Q969T3 373 aa26.4■■□□□ 1.82
COL18A1-207ENST00000473212 CPSF1Q10570 1443 aaKnown RBP26.39■■□□□ 1.82
COL18A1-207ENST00000473212 DDIT3P35638 169 aa26.39■■□□□ 1.82
COL18A1-207ENST00000473212 AEBP1Q8IUX7 1158 aa26.39■■□□□ 1.82
COL18A1-207ENST00000473212 NUDT16Q96DE0 195 aaKnown RBP26.39■■□□□ 1.82
COL18A1-207ENST00000473212 GNAI1P63096 354 aa26.39■■□□□ 1.81
COL18A1-207ENST00000473212 BMP2KLQ5H9B9 411 aa26.39■■□□□ 1.81
COL18A1-207ENST00000473212 DLG5Q8TDM6 1919 aa26.38■■□□□ 1.81
COL18A1-207ENST00000473212 BRPF1P55201 1214 aaPredicted RBP26.38■■□□□ 1.81
COL18A1-207ENST00000473212 IFT57Q9NWB7 429 aa26.38■■□□□ 1.81
COL18A1-207ENST00000473212 FOXD4L1Q9NU39 408 aa26.38■■□□□ 1.81
COL18A1-207ENST00000473212 NUTM2FA1L443 756 aa26.37■■□□□ 1.81
COL18A1-207ENST00000473212 DDX11L8A8MPP1 907 aa26.37■■□□□ 1.81
COL18A1-207ENST00000473212 KIF2CQ99661 725 aa26.37■■□□□ 1.81
COL18A1-207ENST00000473212 RBM42Q9BTD8 480 aaKnown RBP26.37■■□□□ 1.81
COL18A1-207ENST00000473212 PTCH1Q13635 1447 aa26.37■■□□□ 1.81
COL18A1-207ENST00000473212 ZNF428Q96B54 188 aa26.37■■□□□ 1.81
COL18A1-207ENST00000473212 EDC4Q6P2E9 1401 aaKnown RBP26.36■■□□□ 1.81
COL18A1-207ENST00000473212 HSP90AB1P08238 724 aaKnown RBP26.36■■□□□ 1.81
COL18A1-207ENST00000473212 ABCC4O15439 1325 aa26.36■■□□□ 1.81
COL18A1-207ENST00000473212 GCC1Q96CN9 775 aa26.35■■□□□ 1.81
COL18A1-207ENST00000473212 COG3Q96JB2 828 aa26.35■■□□□ 1.81
COL18A1-207ENST00000473212 DLC1Q96QB1 1528 aa26.35■■□□□ 1.81
COL18A1-207ENST00000473212 TBC1D9Q6ZT07 1266 aa26.34■■□□□ 1.81
COL18A1-207ENST00000473212 TNPO1Q92973 898 aaKnown RBP26.34■■□□□ 1.81
COL18A1-207ENST00000473212 CFAP44Q96MT7 982 aa26.34■■□□□ 1.81
COL18A1-207ENST00000473212 PIK3R4Q99570 1358 aa26.34■■□□□ 1.81
COL18A1-207ENST00000473212 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
COL18A1-207ENST00000473212 NRXN3Q9Y4C0 1643 aa26.33■■□□□ 1.81
COL18A1-207ENST00000473212 ARHGAP45Q92619 1136 aa26.32■■□□□ 1.8
COL18A1-207ENST00000473212 CDK12Q9NYV4 1490 aaPredicted RBP26.32■■□□□ 1.8
COL18A1-207ENST00000473212 SOX12O15370 315 aa26.31■■□□□ 1.8
COL18A1-207ENST00000473212 MRE11P49959 708 aa26.31■■□□□ 1.8
COL18A1-207ENST00000473212 CHMP4BQ9H444 224 aaKnown RBP26.31■■□□□ 1.8
COL18A1-207ENST00000473212 C16orf71Q8IYS4 520 aaPredicted RBP26.3■■□□□ 1.8
COL18A1-207ENST00000473212 CCDC61Q9Y6R9 512 aa26.3■■□□□ 1.8
COL18A1-207ENST00000473212 KNDC1Q76NI1 1749 aa26.29■■□□□ 1.8
COL18A1-207ENST00000473212 GSPT1P15170 499 aaKnown RBP26.29■■□□□ 1.8
COL18A1-207ENST00000473212 CALD1Q05682 793 aaKnown RBP26.29■■□□□ 1.8
COL18A1-207ENST00000473212 MCM10Q7L590 875 aa26.29■■□□□ 1.8
COL18A1-207ENST00000473212 DIP2BQ9P265 1576 aa26.28■■□□□ 1.8
COL18A1-207ENST00000473212 SULT6B1Q6IMI4 303 aa26.28■■□□□ 1.8
COL18A1-207ENST00000473212 CIZ1Q9ULV3 898 aaPredicted RBP26.28■■□□□ 1.8
COL18A1-207ENST00000473212 SPATA31D1Q6ZQQ2 1576 aa26.28■■□□□ 1.8
COL18A1-207ENST00000473212 HSP90AA1P07900 732 aaKnown RBP26.27■■□□□ 1.8
COL18A1-207ENST00000473212 GRPEL1Q9HAV7 217 aa26.27■■□□□ 1.8
COL18A1-207ENST00000473212 RAB3GAP1Q15042 981 aa26.27■■□□□ 1.8
COL18A1-207ENST00000473212 OTUD7AQ8TE49 926 aaPredicted RBP26.27■■□□□ 1.8
COL18A1-207ENST00000473212 AATKQ6ZMQ8 1374 aa26.26■■□□□ 1.79
COL18A1-207ENST00000473212 EIF4A2Q14240 407 aaKnown RBP26.26■■□□□ 1.79
COL18A1-207ENST00000473212 APBB1O00213 710 aa26.25■■□□□ 1.79
COL18A1-207ENST00000473212 GBP4Q96PP9 640 aa26.25■■□□□ 1.79
COL18A1-207ENST00000473212 MIS18AQ9NYP9 233 aa26.24■■□□□ 1.79
COL18A1-207ENST00000473212 K7ELQ4 463 aaPredicted RBP26.23■■□□□ 1.79
COL18A1-207ENST00000473212 HSP90AB2PQ58FF8 381 aa26.22■■□□□ 1.79
COL18A1-207ENST00000473212 PLEKHM2Q8IWE5 1019 aa26.22■■□□□ 1.79
COL18A1-207ENST00000473212 API5Q9BZZ5 524 aaKnown RBP26.22■■□□□ 1.79
COL18A1-207ENST00000473212 SMARCA5O60264 1052 aaPredicted RBP26.21■■□□□ 1.79
COL18A1-207ENST00000473212 LMOD3Q0VAK6 560 aa26.21■■□□□ 1.79
COL18A1-207ENST00000473212 MON2Q7Z3U7 1717 aa26.2■■□□□ 1.79
COL18A1-207ENST00000473212 ROBO2Q9HCK4 1378 aa26.2■■□□□ 1.79
COL18A1-207ENST00000473212 CDC45O75419 566 aa26.19■■□□□ 1.78
COL18A1-207ENST00000473212 GAS2L2Q8NHY3 880 aa26.19■■□□□ 1.78
COL18A1-207ENST00000473212 C3P01024 1663 aa26.19■■□□□ 1.78
COL18A1-207ENST00000473212 GAS2L3Q86XJ1 694 aa26.19■■□□□ 1.78
COL18A1-207ENST00000473212 ISY1Q9ULR0 285 aaKnown RBP26.19■■□□□ 1.78
COL18A1-207ENST00000473212 RGS12O14924 1447 aa26.19■■□□□ 1.78
COL18A1-207ENST00000473212 FOXO3O43524 673 aa26.18■■□□□ 1.78
COL18A1-207ENST00000473212 AGLP35573 1532 aa26.18■■□□□ 1.78
COL18A1-207ENST00000473212 CLCN1P35523 988 aa26.18■■□□□ 1.78
COL18A1-207ENST00000473212 MEIS3Q99687 375 aa26.17■■□□□ 1.78
COL18A1-207ENST00000473212 DCTPP1Q9H773 170 aa26.17■■□□□ 1.78
COL18A1-207ENST00000473212 ACEP12821 1306 aa26.16■■□□□ 1.78
COL18A1-207ENST00000473212 TTC21BQ7Z4L5 1316 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms