RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 PHACTR3Q96KR7 559 aa23.76■■□□□ 1.39
GCFC2-208ENST00000472230 KDM4FA0A1W2PPD8 638 aa23.75■■□□□ 1.39
GCFC2-208ENST00000472230 BCAR3O75815 825 aa23.75■■□□□ 1.39
GCFC2-208ENST00000472230 SULT6B1Q6IMI4 303 aa23.73■■□□□ 1.39
GCFC2-208ENST00000472230 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
GCFC2-208ENST00000472230 STRCP1A6NGW2 1772 aa23.73■■□□□ 1.39
GCFC2-208ENST00000472230 CALD1Q05682 793 aaKnown RBP23.72■■□□□ 1.39
GCFC2-208ENST00000472230 LMOD3Q0VAK6 560 aa23.72■■□□□ 1.39
GCFC2-208ENST00000472230 KIF1AQ12756 1690 aa23.72■■□□□ 1.39
GCFC2-208ENST00000472230 C20orf194Q5TEA3 1177 aa23.72■■□□□ 1.39
GCFC2-208ENST00000472230 FANCIQ9NVI1 1328 aa23.72■■□□□ 1.39
GCFC2-208ENST00000472230 RGPD1P0DJD0 1748 aa23.72■■□□□ 1.39
GCFC2-208ENST00000472230 KIF24Q5T7B8 1368 aa23.72■■□□□ 1.39
GCFC2-208ENST00000472230 CANXP27824 592 aaKnown RBP23.72■■□□□ 1.39
GCFC2-208ENST00000472230 TMEM94Q12767 1356 aa23.71■■□□□ 1.39
GCFC2-208ENST00000472230 ATF3P18847 181 aa23.71■■□□□ 1.39
GCFC2-208ENST00000472230 TSR2Q969E8 191 aaKnown RBP23.71■■□□□ 1.39
GCFC2-208ENST00000472230 DLG5Q8TDM6 1919 aa23.7■■□□□ 1.39
GCFC2-208ENST00000472230 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
GCFC2-208ENST00000472230 CT47B1P0C2W7 299 aaPredicted RBP23.7■■□□□ 1.38
GCFC2-208ENST00000472230 C1orf167Q5SNV9 1468 aa23.69■■□□□ 1.38
GCFC2-208ENST00000472230 ARHGEF10O15013 1369 aa23.69■■□□□ 1.38
GCFC2-208ENST00000472230 FOXO3O43524 673 aa23.69■■□□□ 1.38
GCFC2-208ENST00000472230 RARSP54136 660 aaKnown RBP23.69■■□□□ 1.38
GCFC2-208ENST00000472230 LMTK3Q96Q04 1460 aa23.69■■□□□ 1.38
GCFC2-208ENST00000472230 AEBP1Q8IUX7 1158 aa23.68■■□□□ 1.38
GCFC2-208ENST00000472230 TSHZ2Q9NRE2 1034 aa23.68■■□□□ 1.38
GCFC2-208ENST00000472230 EXOSC9Q06265 439 aaKnown RBP23.67■■□□□ 1.38
GCFC2-208ENST00000472230 DCCP43146 1447 aa23.66■■□□□ 1.38
GCFC2-208ENST00000472230 LTN1O94822 1766 aa23.66■■□□□ 1.38
GCFC2-208ENST00000472230 HOXC9P31274 260 aa23.66■■□□□ 1.38
GCFC2-208ENST00000472230 LAS1LQ9Y4W2 734 aaKnown RBP23.66■■□□□ 1.38
GCFC2-208ENST00000472230 KCNH5Q8NCM2 988 aa23.65■■□□□ 1.38
GCFC2-208ENST00000472230 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
GCFC2-208ENST00000472230 XPCQ01831 940 aaPredicted RBP23.64■■□□□ 1.37
GCFC2-208ENST00000472230 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.37
GCFC2-208ENST00000472230 STRCQ7RTU9 1775 aa23.64■■□□□ 1.37
GCFC2-208ENST00000472230 PDE3AQ14432 1141 aa23.63■■□□□ 1.37
GCFC2-208ENST00000472230 KRT28Q7Z3Y7 464 aa23.63■■□□□ 1.37
GCFC2-208ENST00000472230 MST1RQ04912 1400 aa23.62■■□□□ 1.37
GCFC2-208ENST00000472230 GNAI1P63096 354 aa23.62■■□□□ 1.37
GCFC2-208ENST00000472230 LMOD2Q6P5Q4 547 aa23.62■■□□□ 1.37
GCFC2-208ENST00000472230 CADPS2Q86UW7 1296 aa23.62■■□□□ 1.37
GCFC2-208ENST00000472230 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
GCFC2-208ENST00000472230 MSH6P52701 1360 aa23.61■■□□□ 1.37
GCFC2-208ENST00000472230 EYA1Q99502 592 aa23.61■■□□□ 1.37
GCFC2-208ENST00000472230 THUMPD2Q9BTF0 503 aaKnown RBP23.61■■□□□ 1.37
GCFC2-208ENST00000472230 IFT57Q9NWB7 429 aa23.61■■□□□ 1.37
GCFC2-208ENST00000472230 NFAT5O94916 1531 aa23.61■■□□□ 1.37
GCFC2-208ENST00000472230 IGSF1Q8N6C5 1336 aa23.61■■□□□ 1.37
GCFC2-208ENST00000472230 BCL2L13Q9BXK5 485 aa23.61■■□□□ 1.37
GCFC2-208ENST00000472230 ZBTB7CA1YPR0 619 aa23.58■■□□□ 1.37
GCFC2-208ENST00000472230 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
GCFC2-208ENST00000472230 KDRP35968 1356 aa23.58■■□□□ 1.37
GCFC2-208ENST00000472230 IP6K1Q92551 441 aa23.58■■□□□ 1.36
GCFC2-208ENST00000472230 SMC4Q9NTJ3 1288 aa23.58■■□□□ 1.36
GCFC2-208ENST00000472230 FAM83GA6ND36 823 aa23.56■■□□□ 1.36
GCFC2-208ENST00000472230 SLIT3O75094 1523 aa23.56■■□□□ 1.36
GCFC2-208ENST00000472230 CFAP44Q96MT7 982 aa23.55■■□□□ 1.36
GCFC2-208ENST00000472230 XIRP1Q702N8 1843 aaKnown RBP23.55■■□□□ 1.36
GCFC2-208ENST00000472230 PLEKHG5O94827 1062 aa23.54■■□□□ 1.36
GCFC2-208ENST00000472230 GCP02774 474 aa23.54■■□□□ 1.36
GCFC2-208ENST00000472230 ZNF853P0CG23 659 aa23.54■■□□□ 1.36
GCFC2-208ENST00000472230 DCTN1Q14203 1278 aa23.54■■□□□ 1.36
GCFC2-208ENST00000472230 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
GCFC2-208ENST00000472230 PHRF1Q9P1Y6 1649 aaKnown RBP23.54■■□□□ 1.36
GCFC2-208ENST00000472230 MS4A1P11836 297 aa23.53■■□□□ 1.36
GCFC2-208ENST00000472230 ZKSCAN2Q63HK3 967 aa23.53■■□□□ 1.36
GCFC2-208ENST00000472230 GAS2L2Q8NHY3 880 aa23.53■■□□□ 1.36
GCFC2-208ENST00000472230 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
GCFC2-208ENST00000472230 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
GCFC2-208ENST00000472230 ALS2Q96Q42 1657 aa23.52■■□□□ 1.36
GCFC2-208ENST00000472230 SSH1Q8WYL5 1049 aa23.52■■□□□ 1.36
GCFC2-208ENST00000472230 COG6Q9Y2V7 657 aa23.52■■□□□ 1.36
GCFC2-208ENST00000472230 USP19O94966 1318 aa23.52■■□□□ 1.36
GCFC2-208ENST00000472230 RTF1Q92541 710 aaKnown RBP23.52■■□□□ 1.36
GCFC2-208ENST00000472230 NPHP3Q7Z494 1330 aa23.51■■□□□ 1.35
GCFC2-208ENST00000472230 MTHFSDQ2M296 383 aaKnown RBP23.51■■□□□ 1.35
GCFC2-208ENST00000472230 ALDH1L2Q3SY69 923 aa23.51■■□□□ 1.35
GCFC2-208ENST00000472230 MCM10Q7L590 875 aa23.49■■□□□ 1.35
GCFC2-208ENST00000472230 FTSJ3Q8IY81 847 aaKnown RBP23.49■■□□□ 1.35
GCFC2-208ENST00000472230 KIF16BQ96L93 1317 aa23.49■■□□□ 1.35
GCFC2-208ENST00000472230 ARHGEF25Q86VW2 580 aa23.48■■□□□ 1.35
GCFC2-208ENST00000472230 ZNF335Q9H4Z2 1342 aaPredicted RBP23.48■■□□□ 1.35
GCFC2-208ENST00000472230 CLUAP1Q96AJ1 413 aa23.48■■□□□ 1.35
GCFC2-208ENST00000472230 DZIP1LQ8IYY4 767 aaKnown RBP23.47■■□□□ 1.35
GCFC2-208ENST00000472230 IPO8O15397 1037 aaKnown RBP23.47■■□□□ 1.35
GCFC2-208ENST00000472230 AAMPQ13685 434 aa23.47■■□□□ 1.35
GCFC2-208ENST00000472230 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
GCFC2-208ENST00000472230 DDX17Q92841 729 aaKnown RBP23.46■■□□□ 1.35
GCFC2-208ENST00000472230 TNNQ9UQP3 1299 aa23.46■■□□□ 1.35
GCFC2-208ENST00000472230 VAMP4O75379 141 aa23.45■■□□□ 1.35
GCFC2-208ENST00000472230 TWISTNBQ3B726 338 aaPredicted RBP23.45■■□□□ 1.35
GCFC2-208ENST00000472230 USHBP1Q8N6Y0 703 aa23.45■■□□□ 1.35
GCFC2-208ENST00000472230 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.34
GCFC2-208ENST00000472230 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
GCFC2-208ENST00000472230 RLBP1P12271 317 aa23.44■■□□□ 1.34
GCFC2-208ENST00000472230 ATF7IPQ6VMQ6 1270 aa23.44■■□□□ 1.34
GCFC2-208ENST00000472230 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
GCFC2-208ENST00000472230 ELL2O00472 640 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms