RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 KCNH5Q8NCM2 988 aa12.35□□□□□ -0.43
VPS52-216ENST00000471309 CDCA7LQ96GN5 454 aa12.35□□□□□ -0.43
VPS52-216ENST00000471309 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
VPS52-216ENST00000471309 LTBP4Q8N2S1 1624 aa12.35□□□□□ -0.43
VPS52-216ENST00000471309 EIF4A2Q14240 407 aaKnown RBP12.34□□□□□ -0.43
VPS52-216ENST00000471309 SUPT16HQ9Y5B9 1047 aaKnown RBP12.34□□□□□ -0.43
VPS52-216ENST00000471309 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
VPS52-216ENST00000471309 ABCC6O95255 1503 aa12.33□□□□□ -0.44
VPS52-216ENST00000471309 SOX12O15370 315 aa12.33□□□□□ -0.44
VPS52-216ENST00000471309 PRKAR2BP31323 418 aa12.33□□□□□ -0.44
VPS52-216ENST00000471309 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
VPS52-216ENST00000471309 SLFN5Q08AF3 891 aa12.33□□□□□ -0.44
VPS52-216ENST00000471309 NUTM2GQ5VZR2 741 aa12.33□□□□□ -0.44
VPS52-216ENST00000471309 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
VPS52-216ENST00000471309 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
VPS52-216ENST00000471309 E9PSI1 815 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 NEFMP07197 916 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 HOXC9P31274 260 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 AMPHP49418 695 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 DUSP27Q5VZP5 1158 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 TRMT2AQ8IZ69 625 aaKnown RBP12.32□□□□□ -0.44
VPS52-216ENST00000471309 CERKQ8TCT0 537 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
VPS52-216ENST00000471309 KDRP35968 1356 aa12.31□□□□□ -0.44
VPS52-216ENST00000471309 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
VPS52-216ENST00000471309 WDR63Q8IWG1 891 aa12.31□□□□□ -0.44
VPS52-216ENST00000471309 RRP7AQ9Y3A4 280 aaKnown RBP12.31□□□□□ -0.44
VPS52-216ENST00000471309 IGSF1Q8N6C5 1336 aa12.31□□□□□ -0.44
VPS52-216ENST00000471309 ABCA3Q99758 1704 aa12.31□□□□□ -0.44
VPS52-216ENST00000471309 HMOX1P09601 288 aa12.3□□□□□ -0.44
VPS52-216ENST00000471309 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
VPS52-216ENST00000471309 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
VPS52-216ENST00000471309 FKBP8Q14318 412 aa12.29□□□□□ -0.44
VPS52-216ENST00000471309 IP6K1Q92551 441 aa12.29□□□□□ -0.44
VPS52-216ENST00000471309 RCAN3Q9UKA8 241 aa12.29□□□□□ -0.44
VPS52-216ENST00000471309 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
VPS52-216ENST00000471309 SOCS7O14512 581 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 GCP02774 474 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
VPS52-216ENST00000471309 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
VPS52-216ENST00000471309 IL16Q14005 1332 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 LMO7Q8WWI1 1683 aa12.28□□□□□ -0.44
VPS52-216ENST00000471309 FAM208AQ9UK61 1670 aaKnown RBP12.28□□□□□ -0.44
VPS52-216ENST00000471309 AHDC1Q5TGY3 1603 aaPredicted RBP12.27□□□□□ -0.44
VPS52-216ENST00000471309 ROBO1Q9Y6N7 1651 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 RIPK4P57078 832 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 ERICH6BQ5W0A0 696 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 ARHGEF25Q86VW2 580 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 DDX17Q92841 729 aaKnown RBP12.27□□□□□ -0.45
VPS52-216ENST00000471309 COL18A1P39060 1754 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
VPS52-216ENST00000471309 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
VPS52-216ENST00000471309 PHACTR3Q96KR7 559 aa12.26□□□□□ -0.45
VPS52-216ENST00000471309 LMOD3Q0VAK6 560 aa12.25□□□□□ -0.45
VPS52-216ENST00000471309 EYA1Q99502 592 aa12.25□□□□□ -0.45
VPS52-216ENST00000471309 MYH16Q9H6N6 1097 aa12.25□□□□□ -0.45
VPS52-216ENST00000471309 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
VPS52-216ENST00000471309 CPDO75976 1380 aa12.24□□□□□ -0.45
VPS52-216ENST00000471309 RGPD2P0DJD1 1756 aa12.24□□□□□ -0.45
VPS52-216ENST00000471309 RRP1P56182 461 aaKnown RBP12.24□□□□□ -0.45
VPS52-216ENST00000471309 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
VPS52-216ENST00000471309 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
VPS52-216ENST00000471309 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
VPS52-216ENST00000471309 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
VPS52-216ENST00000471309 IRX6P78412 446 aaPredicted RBP12.21□□□□□ -0.45
VPS52-216ENST00000471309 ZBTB7CA1YPR0 619 aa12.2□□□□□ -0.46
VPS52-216ENST00000471309 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
VPS52-216ENST00000471309 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
VPS52-216ENST00000471309 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
VPS52-216ENST00000471309 ERBB3P21860 1342 aa12.19□□□□□ -0.46
VPS52-216ENST00000471309 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
VPS52-216ENST00000471309 ANKRD24Q8TF21 1146 aa12.19□□□□□ -0.46
VPS52-216ENST00000471309 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
VPS52-216ENST00000471309 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
VPS52-216ENST00000471309 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
VPS52-216ENST00000471309 ZC3H6P61129 1189 aaKnown RBP12.18□□□□□ -0.46
VPS52-216ENST00000471309 NBPF6Q5VWK0 638 aa12.18□□□□□ -0.46
VPS52-216ENST00000471309 NBPF4Q96M43 638 aa12.18□□□□□ -0.46
VPS52-216ENST00000471309 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
VPS52-216ENST00000471309 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
VPS52-216ENST00000471309 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
VPS52-216ENST00000471309 GNAI1P63096 354 aa12.17□□□□□ -0.46
VPS52-216ENST00000471309 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
VPS52-216ENST00000471309 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
VPS52-216ENST00000471309 CABLES1Q8TDN4 633 aa12.17□□□□□ -0.46
VPS52-216ENST00000471309 TSR2Q969E8 191 aaKnown RBP12.17□□□□□ -0.46
VPS52-216ENST00000471309 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
VPS52-216ENST00000471309 MAP3K5Q99683 1374 aa12.17□□□□□ -0.46
VPS52-216ENST00000471309 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
VPS52-216ENST00000471309 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
VPS52-216ENST00000471309 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
VPS52-216ENST00000471309 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms