RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PIK3C2BO00750 1634 aa10.47□□□□□ -0.73
SMC4-212ENST00000470240 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.73
SMC4-212ENST00000470240 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.73
SMC4-212ENST00000470240 EVC2Q86UK5 1308 aa10.46□□□□□ -0.73
SMC4-212ENST00000470240 USP32Q8NFA0 1604 aa10.46□□□□□ -0.74
SMC4-212ENST00000470240 CFAP65Q6ZU64 1925 aaKnown RBP10.46□□□□□ -0.74
SMC4-212ENST00000470240 NINLQ9Y2I6 1382 aa10.45□□□□□ -0.74
SMC4-212ENST00000470240 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
SMC4-212ENST00000470240 TCERG1O14776 1098 aaKnown RBP10.45□□□□□ -0.74
SMC4-212ENST00000470240 CFAP53Q96M91 514 aa10.45□□□□□ -0.74
SMC4-212ENST00000470240 SLC52A1Q9NWF4 448 aa10.45□□□□□ -0.74
SMC4-212ENST00000470240 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
SMC4-212ENST00000470240 AXIN2Q9Y2T1 843 aa10.45□□□□□ -0.74
SMC4-212ENST00000470240 NSD2O96028 1365 aa10.44□□□□□ -0.74
SMC4-212ENST00000470240 ANKRD13DQ6ZTN6 518 aa10.44□□□□□ -0.74
SMC4-212ENST00000470240 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
SMC4-212ENST00000470240 NSD3Q9BZ95 1437 aa10.43□□□□□ -0.74
SMC4-212ENST00000470240 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
SMC4-212ENST00000470240 CGNL1Q0VF96 1302 aa10.43□□□□□ -0.74
SMC4-212ENST00000470240 MORC1Q86VD1 984 aa10.43□□□□□ -0.74
SMC4-212ENST00000470240 SPNS2Q8IVW8 549 aa10.43□□□□□ -0.74
SMC4-212ENST00000470240 TRAK1Q9UPV9 953 aa10.43□□□□□ -0.74
SMC4-212ENST00000470240 NEXMIFQ5QGS0 1516 aa10.43□□□□□ -0.74
SMC4-212ENST00000470240 ZFYVE9O95405 1425 aa10.42□□□□□ -0.74
SMC4-212ENST00000470240 ARHGEF28Q8N1W1 1705 aaKnown RBP10.42□□□□□ -0.74
SMC4-212ENST00000470240 ARHGAP33O14559 1287 aa10.42□□□□□ -0.74
SMC4-212ENST00000470240 FOSBP53539 338 aa10.42□□□□□ -0.74
SMC4-212ENST00000470240 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.747e-97■■■■■ 245.7
SMC4-212ENST00000470240 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
SMC4-212ENST00000470240 CDCA7LQ96GN5 454 aa10.42□□□□□ -0.74
SMC4-212ENST00000470240 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
SMC4-212ENST00000470240 E9PSI1 815 aa10.41□□□□□ -0.74
SMC4-212ENST00000470240 RAPGEF3O95398 923 aa10.41□□□□□ -0.74
SMC4-212ENST00000470240 MS4A1P11836 297 aa10.41□□□□□ -0.74
SMC4-212ENST00000470240 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
SMC4-212ENST00000470240 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
SMC4-212ENST00000470240 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
SMC4-212ENST00000470240 NKTRP30414 1462 aaKnown RBP10.4□□□□□ -0.74
SMC4-212ENST00000470240 SPDYE16A6NNV3 312 aaPredicted RBP10.39□□□□□ -0.75
SMC4-212ENST00000470240 POTEEQ6S8J3 1075 aa10.39□□□□□ -0.75
SMC4-212ENST00000470240 REREQ9P2R6 1566 aa10.39□□□□□ -0.75
SMC4-212ENST00000470240 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
SMC4-212ENST00000470240 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
SMC4-212ENST00000470240 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
SMC4-212ENST00000470240 ZNF521Q96K83 1311 aa10.38□□□□□ -0.75
SMC4-212ENST00000470240 PSEN2P49810 448 aa10.38□□□□□ -0.75
SMC4-212ENST00000470240 SLFN5Q08AF3 891 aa10.38□□□□□ -0.75
SMC4-212ENST00000470240 PDIA6Q15084 440 aa10.38□□□□□ -0.75
SMC4-212ENST00000470240 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
SMC4-212ENST00000470240 CRBNQ96SW2 442 aa10.38□□□□□ -0.75
SMC4-212ENST00000470240 PHF14O94880 888 aa10.37□□□□□ -0.75
SMC4-212ENST00000470240 PTPREP23469 700 aa10.37□□□□□ -0.75
SMC4-212ENST00000470240 CANXP27824 592 aaKnown RBP10.37□□□□□ -0.75
SMC4-212ENST00000470240 CENPQQ7L2Z9 268 aaPredicted RBP10.37□□□□□ -0.75
SMC4-212ENST00000470240 CCDC146Q8IYE0 955 aa10.37□□□□□ -0.75
SMC4-212ENST00000470240 BCL2L12Q9HB09 334 aa10.37□□□□□ -0.75
SMC4-212ENST00000470240 NOP58Q9Y2X3 529 aaKnown RBP10.37□□□□□ -0.75
SMC4-212ENST00000470240 AGLP35573 1532 aa10.37□□□□□ -0.75
SMC4-212ENST00000470240 APAF1O14727 1248 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 DDX12PQ92771 950 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 RUNDC1Q96C34 613 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 CARD14Q9BXL6 1004 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
SMC4-212ENST00000470240 PCDHGA10Q9Y5H3 936 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 TMEM131LA2VDJ0 1609 aa10.36□□□□□ -0.75
SMC4-212ENST00000470240 DIP2BQ9P265 1576 aa10.35□□□□□ -0.75
SMC4-212ENST00000470240 YEATS2Q9ULM3 1422 aa10.35□□□□□ -0.75
SMC4-212ENST00000470240 MMRN1Q13201 1228 aa10.35□□□□□ -0.75
SMC4-212ENST00000470240 TMEM132EQ6IEE7 984 aa10.35□□□□□ -0.75
SMC4-212ENST00000470240 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
SMC4-212ENST00000470240 ADAM33Q9BZ11 813 aa10.35□□□□□ -0.75
SMC4-212ENST00000470240 PNNQ9H307 717 aaKnown RBP10.35□□□□□ -0.75
SMC4-212ENST00000470240 POGKQ9P215 609 aa10.35□□□□□ -0.75
SMC4-212ENST00000470240 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
SMC4-212ENST00000470240 TULP4Q9NRJ4 1543 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 PTGER2P43116 358 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
SMC4-212ENST00000470240 AAMPQ13685 434 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 IDI1Q13907 227 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 HDGFL2Q7Z4V5 671 aaPredicted RBP10.34□□□□□ -0.75
SMC4-212ENST00000470240 IPO9Q96P70 1041 aaKnown RBP10.34□□□□□ -0.75
SMC4-212ENST00000470240 EPAS1Q99814 870 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 SLC12A5Q9H2X9 1139 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 MYO5BQ9ULV0 1848 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
SMC4-212ENST00000470240 ANKRD26Q9UPS8 1709 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 PLIN1O60240 522 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 FAM69CQ0P6D2 419 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 KCNV2Q8TDN2 545 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 ESF1Q9H501 851 aaKnown RBP10.33□□□□□ -0.76
SMC4-212ENST00000470240 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
SMC4-212ENST00000470240 NBR1Q14596 966 aa10.32□□□□□ -0.76
SMC4-212ENST00000470240 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
SMC4-212ENST00000470240 ADGRD1Q6QNK2 874 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms