RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 TRIM35Q9UPQ4 493 aa19.28■□□□□ 0.68
SCYL3-205ENST00000470238 AMPHP49418 695 aa19.27■□□□□ 0.68
SCYL3-205ENST00000470238 NFE2L2Q16236 605 aa19.27■□□□□ 0.68
SCYL3-205ENST00000470238 HSP90AB2PQ58FF8 381 aa19.27■□□□□ 0.68
SCYL3-205ENST00000470238 ORAI2Q96SN7 254 aa19.27■□□□□ 0.68
SCYL3-205ENST00000470238 STRCQ7RTU9 1775 aa19.27■□□□□ 0.67
SCYL3-205ENST00000470238 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
SCYL3-205ENST00000470238 RGPD1P0DJD0 1748 aa19.25■□□□□ 0.67
SCYL3-205ENST00000470238 FOXO3O43524 673 aa19.24■□□□□ 0.67
SCYL3-205ENST00000470238 PHACTR3Q96KR7 559 aa19.24■□□□□ 0.67
SCYL3-205ENST00000470238 ARHGEF10O15013 1369 aa19.23■□□□□ 0.67
SCYL3-205ENST00000470238 MST1RQ04912 1400 aa19.23■□□□□ 0.67
SCYL3-205ENST00000470238 PLIN1O60240 522 aa19.23■□□□□ 0.67
SCYL3-205ENST00000470238 CADPS2Q86UW7 1296 aa19.23■□□□□ 0.67
SCYL3-205ENST00000470238 RTL1A6NKG5 1358 aa19.23■□□□□ 0.67
SCYL3-205ENST00000470238 CALD1Q05682 793 aaKnown RBP19.22■□□□□ 0.67
SCYL3-205ENST00000470238 LMOD3Q0VAK6 560 aa19.22■□□□□ 0.67
SCYL3-205ENST00000470238 SULT6B1Q6IMI4 303 aa19.22■□□□□ 0.67
SCYL3-205ENST00000470238 MSH6P52701 1360 aa19.22■□□□□ 0.67
SCYL3-205ENST00000470238 B4GALNT3Q6L9W6 998 aa19.21■□□□□ 0.67
SCYL3-205ENST00000470238 KCNH5Q8NCM2 988 aa19.21■□□□□ 0.67
SCYL3-205ENST00000470238 CT47B1P0C2W7 299 aaPredicted RBP19.2■□□□□ 0.66
SCYL3-205ENST00000470238 EXOC6Q8TAG9 804 aa19.2■□□□□ 0.66
SCYL3-205ENST00000470238 NFAT5O94916 1531 aa19.2■□□□□ 0.66
SCYL3-205ENST00000470238 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
SCYL3-205ENST00000470238 HOXC9P31274 260 aa19.2■□□□□ 0.66
SCYL3-205ENST00000470238 KRT28Q7Z3Y7 464 aa19.2■□□□□ 0.66
SCYL3-205ENST00000470238 CCDC136Q96JN2 1154 aa19.2■□□□□ 0.66
SCYL3-205ENST00000470238 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
SCYL3-205ENST00000470238 AEBP1Q8IUX7 1158 aa19.19■□□□□ 0.66
SCYL3-205ENST00000470238 XPCQ01831 940 aaPredicted RBP19.17■□□□□ 0.66
SCYL3-205ENST00000470238 LTN1O94822 1766 aa19.17■□□□□ 0.66
SCYL3-205ENST00000470238 SLIT3O75094 1523 aa19.17■□□□□ 0.66
SCYL3-205ENST00000470238 KDRP35968 1356 aa19.16■□□□□ 0.66
SCYL3-205ENST00000470238 IGSF1Q8N6C5 1336 aa19.16■□□□□ 0.66
SCYL3-205ENST00000470238 BCAR3O75815 825 aa19.16■□□□□ 0.66
SCYL3-205ENST00000470238 RARSP54136 660 aaKnown RBP19.16■□□□□ 0.66
SCYL3-205ENST00000470238 PHRF1Q9P1Y6 1649 aaKnown RBP19.15■□□□□ 0.66
SCYL3-205ENST00000470238 TSR2Q969E8 191 aaKnown RBP19.15■□□□□ 0.66
SCYL3-205ENST00000470238 CRBNQ96SW2 442 aa19.15■□□□□ 0.66
SCYL3-205ENST00000470238 XIRP1Q702N8 1843 aaKnown RBP19.15■□□□□ 0.66
SCYL3-205ENST00000470238 IP6K1Q92551 441 aa19.15■□□□□ 0.66
SCYL3-205ENST00000470238 EYA1Q99502 592 aa19.15■□□□□ 0.66
SCYL3-205ENST00000470238 DLG5Q8TDM6 1919 aa19.14■□□□□ 0.66
SCYL3-205ENST00000470238 USP19O94966 1318 aa19.14■□□□□ 0.65
SCYL3-205ENST00000470238 C20orf194Q5TEA3 1177 aa19.14■□□□□ 0.65
SCYL3-205ENST00000470238 NPHP3Q7Z494 1330 aa19.13■□□□□ 0.65
SCYL3-205ENST00000470238 GNAI1P63096 354 aa19.13■□□□□ 0.65
SCYL3-205ENST00000470238 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
SCYL3-205ENST00000470238 LMOD2Q6P5Q4 547 aa19.13■□□□□ 0.65
SCYL3-205ENST00000470238 IFT57Q9NWB7 429 aa19.13■□□□□ 0.65
SCYL3-205ENST00000470238 ALS2Q96Q42 1657 aa19.12■□□□□ 0.65
SCYL3-205ENST00000470238 GCP02774 474 aa19.12■□□□□ 0.65
SCYL3-205ENST00000470238 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
SCYL3-205ENST00000470238 ZNF335Q9H4Z2 1342 aaPredicted RBP19.12■□□□□ 0.65
SCYL3-205ENST00000470238 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
SCYL3-205ENST00000470238 THUMPD2Q9BTF0 503 aaKnown RBP19.1■□□□□ 0.65
SCYL3-205ENST00000470238 ZNF853P0CG23 659 aa19.09■□□□□ 0.65
SCYL3-205ENST00000470238 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
SCYL3-205ENST00000470238 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
SCYL3-205ENST00000470238 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
SCYL3-205ENST00000470238 GAS2L2Q8NHY3 880 aa19.08■□□□□ 0.64
SCYL3-205ENST00000470238 CFAP44Q96MT7 982 aa19.08■□□□□ 0.64
SCYL3-205ENST00000470238 ZNF428Q96B54 188 aa19.07■□□□□ 0.64
SCYL3-205ENST00000470238 TNS3Q68CZ2 1445 aa19.07■□□□□ 0.64
SCYL3-205ENST00000470238 PXDNQ92626 1479 aa19.06■□□□□ 0.64
SCYL3-205ENST00000470238 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
SCYL3-205ENST00000470238 FAM83GA6ND36 823 aa19.06■□□□□ 0.64
SCYL3-205ENST00000470238 FRAT1Q92837 279 aaPredicted RBP19.06■□□□□ 0.64
SCYL3-205ENST00000470238 MED1Q15648 1581 aaPredicted RBP19.05■□□□□ 0.64
SCYL3-205ENST00000470238 MTHFSDQ2M296 383 aaKnown RBP19.05■□□□□ 0.64
SCYL3-205ENST00000470238 BCL2L13Q9BXK5 485 aa19.05■□□□□ 0.64
SCYL3-205ENST00000470238 MBIPQ9NS73 344 aa19.05■□□□□ 0.64
SCYL3-205ENST00000470238 SMC4Q9NTJ3 1288 aa19.05■□□□□ 0.64
SCYL3-205ENST00000470238 DCTN1Q14203 1278 aa19.04■□□□□ 0.64
SCYL3-205ENST00000470238 ALDH1L2Q3SY69 923 aa19.04■□□□□ 0.64
SCYL3-205ENST00000470238 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
SCYL3-205ENST00000470238 RTF1Q92541 710 aaKnown RBP19.04■□□□□ 0.64
SCYL3-205ENST00000470238 DDX17Q92841 729 aaKnown RBP19.04■□□□□ 0.64
SCYL3-205ENST00000470238 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
SCYL3-205ENST00000470238 MS4A1P11836 297 aa19.03■□□□□ 0.64
SCYL3-205ENST00000470238 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
SCYL3-205ENST00000470238 PLEKHG5O94827 1062 aa19.02■□□□□ 0.64
SCYL3-205ENST00000470238 ZKSCAN2Q63HK3 967 aa19.02■□□□□ 0.64
SCYL3-205ENST00000470238 SSH1Q8WYL5 1049 aa19.02■□□□□ 0.64
SCYL3-205ENST00000470238 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
SCYL3-205ENST00000470238 MCM10Q7L590 875 aa19.01■□□□□ 0.63
SCYL3-205ENST00000470238 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
SCYL3-205ENST00000470238 PANK1Q8TE04 598 aa19■□□□□ 0.63
SCYL3-205ENST00000470238 NBPF4Q96M43 638 aa19■□□□□ 0.63
SCYL3-205ENST00000470238 KIF16BQ96L93 1317 aa19■□□□□ 0.63
SCYL3-205ENST00000470238 AAMPQ13685 434 aa19■□□□□ 0.63
SCYL3-205ENST00000470238 TSHZ2Q9NRE2 1034 aa19■□□□□ 0.63
SCYL3-205ENST00000470238 CRB1P82279 1406 aa18.99■□□□□ 0.63
SCYL3-205ENST00000470238 GNAT3A8MTJ3 354 aa18.99■□□□□ 0.63
SCYL3-205ENST00000470238 CHL1O00533 1208 aa18.99■□□□□ 0.63
SCYL3-205ENST00000470238 USHBP1Q8N6Y0 703 aa18.99■□□□□ 0.63
SCYL3-205ENST00000470238 ANKRD24Q8TF21 1146 aa18.99■□□□□ 0.63
SCYL3-205ENST00000470238 NCAPD2Q15021 1401 aa18.99■□□□□ 0.63
SCYL3-205ENST00000470238 IPO8O15397 1037 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms